| Definition | Geobacter bemidjiensis Bem chromosome, complete genome. |
|---|---|
| Accession | NC_011146 |
| Length | 4,615,150 |
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The map label for this gene is 197117211
Identifier: 197117211
GI number: 197117211
Start: 970474
End: 971025
Strand: Direct
Name: 197117211
Synonym: Gbem_0819
Alternate gene names: NA
Gene position: 970474-971025 (Clockwise)
Preceding gene: 197117208
Following gene: 197117212
Centisome position: 21.03
GC content: 62.68
Gene sequence:
>552_bases ATGAAAGTCATTAAGATGAGAGCGCTCATCATACCGATGTTAGTCGCAGCCTGGTCGGTGCTATCGGCCGCAGAGGTGAG CTATGCGGACAGAGGTGGCGGCGGGGGGGGCGAGCAGGTGGCGCGCGCCGCCGGACGCAGCGGAGGTACCAGTTACGGCG GCCGCGGCGGCTATGTCGGCCGCGGTGGATACACCGGACGCGGCGGCTACTCCGGGGGCGGCTACGGTACCAGATACCTG GGACCCAGCCACAGCTACAGCCATTTCTCCGGCAGCGTGTGGATAGGCCCCGGCTTCGGGTTCTGGGATCCTTGGTATTA CCCCTATTACCAGTATCCCAGTTACCGCTACTACGCTCCACCAACAGTGGTGGTTCCGCAGGAGCCGCAGGAGTACGTTC TCCCCGAAAGCCAGCAGGAGACGGGATACTGGTATTACTGCCGGAACCCGCAGGGGTACTACCCTTACGTTGAGCGCTGC CCAAGCGGCTGGATGAAAGTGGTTCCCGACACCGTACCCCCTGGGGAAGAGCAGCAGGACAAGGAGAAGTGA
Upstream 100 bases:
>100_bases CGCTCCAGAGGCGGTTGAGCAGGTTTGTTAGTTTTTGCAGATGTTGCCGGCAAGTTGTATACTGGACTGGTCAAAGTCCC GTCATTAAAGGAGGGGAGCT
Downstream 100 bases:
>100_bases CATGAAAAAACATTCCAGAACAGCGGCCTGGTTGCTGCTGGCCCTCTTGGGGGTGAGCGGGTGCGCAACTGTTCCCACCG GCCCCAGCGTCAGGGTGCTG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 183; Mature: 183
Protein sequence:
>183_residues MKVIKMRALIIPMLVAAWSVLSAAEVSYADRGGGGGGEQVARAAGRSGGTSYGGRGGYVGRGGYTGRGGYSGGGYGTRYL GPSHSYSHFSGSVWIGPGFGFWDPWYYPYYQYPSYRYYAPPTVVVPQEPQEYVLPESQQETGYWYYCRNPQGYYPYVERC PSGWMKVVPDTVPPGEEQQDKEK
Sequences:
>Translated_183_residues MKVIKMRALIIPMLVAAWSVLSAAEVSYADRGGGGGGEQVARAAGRSGGTSYGGRGGYVGRGGYTGRGGYSGGGYGTRYL GPSHSYSHFSGSVWIGPGFGFWDPWYYPYYQYPSYRYYAPPTVVVPQEPQEYVLPESQQETGYWYYCRNPQGYYPYVERC PSGWMKVVPDTVPPGEEQQDKEK >Mature_183_residues MKVIKMRALIIPMLVAAWSVLSAAEVSYADRGGGGGGEQVARAAGRSGGTSYGGRGGYVGRGGYTGRGGYSGGGYGTRYL GPSHSYSHFSGSVWIGPGFGFWDPWYYPYYQYPSYRYYAPPTVVVPQEPQEYVLPESQQETGYWYYCRNPQGYYPYVERC PSGWMKVVPDTVPPGEEQQDKEK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20232; Mature: 20232
Theoretical pI: Translated: 8.50; Mature: 8.50
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKVIKMRALIIPMLVAAWSVLSAAEVSYADRGGGGGGEQVARAAGRSGGTSYGGRGGYVG CCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCC RGGYTGRGGYSGGGYGTRYLGPSHSYSHFSGSVWIGPGFGFWDPWYYPYYQYPSYRYYAP CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCEECCCEEEECC PTVVVPQEPQEYVLPESQQETGYWYYCRNPQGYYPYVERCPSGWMKVVPDTVPPGEEQQD CEEEECCCCHHHCCCCCCCCCCEEEEECCCCCCCHHHHHCCCCCEEECCCCCCCCCCCCC KEK CCC >Mature Secondary Structure MKVIKMRALIIPMLVAAWSVLSAAEVSYADRGGGGGGEQVARAAGRSGGTSYGGRGGYVG CCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCC RGGYTGRGGYSGGGYGTRYLGPSHSYSHFSGSVWIGPGFGFWDPWYYPYYQYPSYRYYAP CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCEECCCEEEECC PTVVVPQEPQEYVLPESQQETGYWYYCRNPQGYYPYVERCPSGWMKVVPDTVPPGEEQQD CEEEECCCCHHHCCCCCCCCCCEEEEECCCCCCCHHHHHCCCCCEEECCCCCCCCCCCCC KEK CCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA