Definition Geobacter bemidjiensis Bem chromosome, complete genome.
Accession NC_011146
Length 4,615,150

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The map label for this gene is 197117211

Identifier: 197117211

GI number: 197117211

Start: 970474

End: 971025

Strand: Direct

Name: 197117211

Synonym: Gbem_0819

Alternate gene names: NA

Gene position: 970474-971025 (Clockwise)

Preceding gene: 197117208

Following gene: 197117212

Centisome position: 21.03

GC content: 62.68

Gene sequence:

>552_bases
ATGAAAGTCATTAAGATGAGAGCGCTCATCATACCGATGTTAGTCGCAGCCTGGTCGGTGCTATCGGCCGCAGAGGTGAG
CTATGCGGACAGAGGTGGCGGCGGGGGGGGCGAGCAGGTGGCGCGCGCCGCCGGACGCAGCGGAGGTACCAGTTACGGCG
GCCGCGGCGGCTATGTCGGCCGCGGTGGATACACCGGACGCGGCGGCTACTCCGGGGGCGGCTACGGTACCAGATACCTG
GGACCCAGCCACAGCTACAGCCATTTCTCCGGCAGCGTGTGGATAGGCCCCGGCTTCGGGTTCTGGGATCCTTGGTATTA
CCCCTATTACCAGTATCCCAGTTACCGCTACTACGCTCCACCAACAGTGGTGGTTCCGCAGGAGCCGCAGGAGTACGTTC
TCCCCGAAAGCCAGCAGGAGACGGGATACTGGTATTACTGCCGGAACCCGCAGGGGTACTACCCTTACGTTGAGCGCTGC
CCAAGCGGCTGGATGAAAGTGGTTCCCGACACCGTACCCCCTGGGGAAGAGCAGCAGGACAAGGAGAAGTGA

Upstream 100 bases:

>100_bases
CGCTCCAGAGGCGGTTGAGCAGGTTTGTTAGTTTTTGCAGATGTTGCCGGCAAGTTGTATACTGGACTGGTCAAAGTCCC
GTCATTAAAGGAGGGGAGCT

Downstream 100 bases:

>100_bases
CATGAAAAAACATTCCAGAACAGCGGCCTGGTTGCTGCTGGCCCTCTTGGGGGTGAGCGGGTGCGCAACTGTTCCCACCG
GCCCCAGCGTCAGGGTGCTG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 183; Mature: 183

Protein sequence:

>183_residues
MKVIKMRALIIPMLVAAWSVLSAAEVSYADRGGGGGGEQVARAAGRSGGTSYGGRGGYVGRGGYTGRGGYSGGGYGTRYL
GPSHSYSHFSGSVWIGPGFGFWDPWYYPYYQYPSYRYYAPPTVVVPQEPQEYVLPESQQETGYWYYCRNPQGYYPYVERC
PSGWMKVVPDTVPPGEEQQDKEK

Sequences:

>Translated_183_residues
MKVIKMRALIIPMLVAAWSVLSAAEVSYADRGGGGGGEQVARAAGRSGGTSYGGRGGYVGRGGYTGRGGYSGGGYGTRYL
GPSHSYSHFSGSVWIGPGFGFWDPWYYPYYQYPSYRYYAPPTVVVPQEPQEYVLPESQQETGYWYYCRNPQGYYPYVERC
PSGWMKVVPDTVPPGEEQQDKEK
>Mature_183_residues
MKVIKMRALIIPMLVAAWSVLSAAEVSYADRGGGGGGEQVARAAGRSGGTSYGGRGGYVGRGGYTGRGGYSGGGYGTRYL
GPSHSYSHFSGSVWIGPGFGFWDPWYYPYYQYPSYRYYAPPTVVVPQEPQEYVLPESQQETGYWYYCRNPQGYYPYVERC
PSGWMKVVPDTVPPGEEQQDKEK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 20232; Mature: 20232

Theoretical pI: Translated: 8.50; Mature: 8.50

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKVIKMRALIIPMLVAAWSVLSAAEVSYADRGGGGGGEQVARAAGRSGGTSYGGRGGYVG
CCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCC
RGGYTGRGGYSGGGYGTRYLGPSHSYSHFSGSVWIGPGFGFWDPWYYPYYQYPSYRYYAP
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCEECCCEEEECC
PTVVVPQEPQEYVLPESQQETGYWYYCRNPQGYYPYVERCPSGWMKVVPDTVPPGEEQQD
CEEEECCCCHHHCCCCCCCCCCEEEEECCCCCCCHHHHHCCCCCEEECCCCCCCCCCCCC
KEK
CCC
>Mature Secondary Structure
MKVIKMRALIIPMLVAAWSVLSAAEVSYADRGGGGGGEQVARAAGRSGGTSYGGRGGYVG
CCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCC
RGGYTGRGGYSGGGYGTRYLGPSHSYSHFSGSVWIGPGFGFWDPWYYPYYQYPSYRYYAP
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCEECCCEEEECC
PTVVVPQEPQEYVLPESQQETGYWYYCRNPQGYYPYVERCPSGWMKVVPDTVPPGEEQQD
CEEEECCCCHHHCCCCCCCCCCEEEEECCCCCCCHHHHHCCCCCEEECCCCCCCCCCCCC
KEK
CCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA