Click here to switch to the map view.

The map label for this gene is epsE [H]

Identifier: 197117194

GI number: 197117194

Start: 945598

End: 946614

Strand: Reverse

Name: epsE [H]

Synonym: Gbem_0802

Alternate gene names: 197117194

Gene position: 946614-945598 (Counterclockwise)

Preceding gene: 197117196

Following gene: 197117192

Centisome position: 20.51

GC content: 66.27

Gene sequence:

>1017_bases
ATGACCACGCTGAATCACATTCCGGCTGTCTCCATCCTGATGCCGGTGAGAAACGAGGAACGGTTCCTGCCGGCGGCGCT
TCGTTCGCTTGCGGCACAGACCTTCCCCGATTGCGAGCTGGTGGCGGTGGATGACGGCTCGACCGACGACACACCCGGCG
TCCTCGCCGAGGCGGCGGCAAGCGACCCGCGCATCCGGGTGCTTCACTGCGGCGAGGGGCTGGTCCCCGCCTTGAACCAG
GGGCTCAAAGCATGCCGGGCTCCGCTTATCGCCAGGATGGACGGCGACGATATCGCGCATCCCCAAAGACTCGCGGCGCA
GGTGGCGTTCCTTGCCGCCCACCCCGGGACAGGGCTCGTTGCCTGCTCGTTCAAGCATTTCCCCCGGCAGCAGGTCGGCA
CCGGTATGAACGGGTACGAGCAGTGGCAGAACCGGCTCATCTCCCACGACGAGATAACCGCAGACCTCTTCGTCGAGTCC
CCTTTCGTGCACCCGAGCGTGATGTACCGCAGGTCGGATGTAGAGCAGCTGGGCGGCTACCGCGACCAGGGATGGCCGGA
AGACTACGACCTGTGGCTCAGACTTGCCGCCGCGCAAGTGAAGTTCGCAAGGCTTCCAGAGACTCTGTTCTTCTGGAGAG
AGCGCCCCGAACGGACCACGCGCACCAATCCTGCCTATGCCCCCGACGCGTTTCGCCGTTGCAAGCTGCACCACCTGATG
AACGGATTTCTGAAAGGGGAAAGCGAGGTCATTCTAGCCGGAGCGGGCCTGGAGGGGCGGGCGTGGTATCGCCTGCTGCG
CGAGAAGGGGATCAGGGTCTCCGCCTGGCTGGACGTCGACCCCCGGAAGATCGGGCGGGAGCTGCACGGTGCCCCGGTAC
TTGCCACCGGCCAGGTGAGGCCATCCGGGGTGAAGCTGCTGATGACGGTGGGCGCCCGGGGGGCTCGGGCGCTGGTGCGG
GCGTCCTCCGCGCAGGCGGGGTTCGTCGAAGGAATCGACGCCGTCTGCGTGGCTTGA

Upstream 100 bases:

>100_bases
GAACCAGTCACCTCCTACTCGCGGCGCCTTTTCACTTGGAGTACAACCCTTACTGCTGATATGTTGCCTATCGCAATAAC
AGGCATATGGGGGACTCTGC

Downstream 100 bases:

>100_bases
GATAGCTGTTTTTTCCCGTTGTGTTCAGCCCCCGTACTTCTCCTTCTCCTCCGTTTCCTGCTCCATCTGGTCCAGCTCCC
GGTGAAAGCGGTGATGGCGT

Product: family glycosyltransferase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 338; Mature: 337

Protein sequence:

>338_residues
MTTLNHIPAVSILMPVRNEERFLPAALRSLAAQTFPDCELVAVDDGSTDDTPGVLAEAAASDPRIRVLHCGEGLVPALNQ
GLKACRAPLIARMDGDDIAHPQRLAAQVAFLAAHPGTGLVACSFKHFPRQQVGTGMNGYEQWQNRLISHDEITADLFVES
PFVHPSVMYRRSDVEQLGGYRDQGWPEDYDLWLRLAAAQVKFARLPETLFFWRERPERTTRTNPAYAPDAFRRCKLHHLM
NGFLKGESEVILAGAGLEGRAWYRLLREKGIRVSAWLDVDPRKIGRELHGAPVLATGQVRPSGVKLLMTVGARGARALVR
ASSAQAGFVEGIDAVCVA

Sequences:

>Translated_338_residues
MTTLNHIPAVSILMPVRNEERFLPAALRSLAAQTFPDCELVAVDDGSTDDTPGVLAEAAASDPRIRVLHCGEGLVPALNQ
GLKACRAPLIARMDGDDIAHPQRLAAQVAFLAAHPGTGLVACSFKHFPRQQVGTGMNGYEQWQNRLISHDEITADLFVES
PFVHPSVMYRRSDVEQLGGYRDQGWPEDYDLWLRLAAAQVKFARLPETLFFWRERPERTTRTNPAYAPDAFRRCKLHHLM
NGFLKGESEVILAGAGLEGRAWYRLLREKGIRVSAWLDVDPRKIGRELHGAPVLATGQVRPSGVKLLMTVGARGARALVR
ASSAQAGFVEGIDAVCVA
>Mature_337_residues
TTLNHIPAVSILMPVRNEERFLPAALRSLAAQTFPDCELVAVDDGSTDDTPGVLAEAAASDPRIRVLHCGEGLVPALNQG
LKACRAPLIARMDGDDIAHPQRLAAQVAFLAAHPGTGLVACSFKHFPRQQVGTGMNGYEQWQNRLISHDEITADLFVESP
FVHPSVMYRRSDVEQLGGYRDQGWPEDYDLWLRLAAAQVKFARLPETLFFWRERPERTTRTNPAYAPDAFRRCKLHHLMN
GFLKGESEVILAGAGLEGRAWYRLLREKGIRVSAWLDVDPRKIGRELHGAPVLATGQVRPSGVKLLMTVGARGARALVRA
SSAQAGFVEGIDAVCVA

Specific function: May be involved in the production of the exopolysaccharide (EPS) component of the extracellular matrix during biofilm formation. EPS is responsible for the adhesion of chains of cells into bundles. Required for biofilm maintenance [H]

COG id: COG0463

COG function: function code M; Glycosyltransferases involved in cell wall biogenesis

Gene ontology:

Cell location: Integral Membrane Protein [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycosyltransferase 2 family [H]

Homologues:

Organism=Homo sapiens, GI57770468, Length=288, Percent_Identity=25, Blast_Score=71, Evalue=2e-12,
Organism=Escherichia coli, GI1787259, Length=226, Percent_Identity=26.9911504424779, Blast_Score=75, Evalue=6e-15,
Organism=Caenorhabditis elegans, GI212640903, Length=306, Percent_Identity=23.5294117647059, Blast_Score=85, Evalue=5e-17,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001173 [H]

Pfam domain/function: PF00535 Glycos_transf_2 [H]

EC number: NA

Molecular weight: Translated: 37132; Mature: 37001

Theoretical pI: Translated: 7.89; Mature: 7.89

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTTLNHIPAVSILMPVRNEERFLPAALRSLAAQTFPDCELVAVDDGSTDDTPGVLAEAAA
CCCCCCCCEEEEEEECCCCCCHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCHHHHHHC
SDPRIRVLHCGEGLVPALNQGLKACRAPLIARMDGDDIAHPQRLAAQVAFLAAHPGTGLV
CCCCEEEEECCCCCHHHHHHHHHHHHCCCEEECCCCCCCCHHHHHHHHHHEEECCCCCEE
ACSFKHFPRQQVGTGMNGYEQWQNRLISHDEITADLFVESPFVHPSVMYRRSDVEQLGGY
EECCHHCCHHHHCCCCCHHHHHHHHCCCCCCCCCEEEECCCCCCHHHHHHHCCHHHHCCC
RDQGWPEDYDLWLRLAAAQVKFARLPETLFFWRERPERTTRTNPAYAPDAFRRCKLHHLM
CCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHH
NGFLKGESEVILAGAGLEGRAWYRLLREKGIRVSAWLDVDPRKIGRELHGAPVLATGQVR
HHHHCCCCCEEEEECCCCHHHHHHHHHHCCCEEEEEECCCHHHHHHHHCCCCEEEECCCC
PSGVKLLMTVGARGARALVRASSAQAGFVEGIDAVCVA
CCCEEEEEEECCCCHHHHHHCCCCCCCHHHCCHHHHCC
>Mature Secondary Structure 
TTLNHIPAVSILMPVRNEERFLPAALRSLAAQTFPDCELVAVDDGSTDDTPGVLAEAAA
CCCCCCCEEEEEEECCCCCCHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCHHHHHHC
SDPRIRVLHCGEGLVPALNQGLKACRAPLIARMDGDDIAHPQRLAAQVAFLAAHPGTGLV
CCCCEEEEECCCCCHHHHHHHHHHHHCCCEEECCCCCCCCHHHHHHHHHHEEECCCCCEE
ACSFKHFPRQQVGTGMNGYEQWQNRLISHDEITADLFVESPFVHPSVMYRRSDVEQLGGY
EECCHHCCHHHHCCCCCHHHHHHHHCCCCCCCCCEEEECCCCCCHHHHHHHCCHHHHCCC
RDQGWPEDYDLWLRLAAAQVKFARLPETLFFWRERPERTTRTNPAYAPDAFRRCKLHHLM
CCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHH
NGFLKGESEVILAGAGLEGRAWYRLLREKGIRVSAWLDVDPRKIGRELHGAPVLATGQVR
HHHHCCCCCEEEEECCCCHHHHHHHHHHCCCEEEEEECCCHHHHHHHHCCCCEEEECCCC
PSGVKLLMTVGARGARALVRASSAQAGFVEGIDAVCVA
CCCEEEEEEECCCCHHHHHHCCCCCCCHHHCCHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8969506; 9384377 [H]