| Definition | Geobacter bemidjiensis Bem chromosome, complete genome. |
|---|---|
| Accession | NC_011146 |
| Length | 4,615,150 |
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The map label for this gene is 197117170
Identifier: 197117170
GI number: 197117170
Start: 911844
End: 912317
Strand: Reverse
Name: 197117170
Synonym: Gbem_0775
Alternate gene names: NA
Gene position: 912317-911844 (Counterclockwise)
Preceding gene: 308535189
Following gene: 197117169
Centisome position: 19.77
GC content: 54.85
Gene sequence:
>474_bases ATGAAGATCAATGCCTTTGTATGGATGATCTTAGCGCTGCTGGCGTCCACACCGCCCCTGGGTGCCGAGCCTGTGCAACT GGACGAGGATAGCGAGCCGCGACTTGACATGCCCTGCCCCCCACACACACCGTTGCGATTCGTCCAGACGAAAGGAAGAG TGAACCAATCTTTGGAAGTACGTTACGTCGATGCTCGGACCATCGCCTTCAAACTCGACAAGTCCGGAAGATGCAGCCGG CATGAGCAGGGGACGGCGACCATCAAGGAAAACTGGTGGCTGGGCGCCGAAACCGACGAGAATGAGACGGGTGACATGAT TCCCGTCCGGGAGTACGTCTTCGAGAAAAGCAAGCAGTGCACGATCTATGTAAGGATCGATGAAACCGAGTGGAAGCAGG CAACAGTGAAGGAATCCTCCCAGTGCAGCAAAAGCTGTCCGGCATCAGAAGAGGCAATGGGAAATGAAAAGTAA
Upstream 100 bases:
>100_bases GGAACAAGGTGCAGGAGTCGCGGTTTCCTAAAGCAACATGGAATCTTTTGGGCAGCCGCTGGCCGCCCTACCATCAACGG TAACAAGACGAGGTAGTGAC
Downstream 100 bases:
>100_bases AAGGTCTCTCCTGGAGTCCCCTGCCCCCTCTGCCCCCTCTGCACCAGACAGCGGCACCGGCGAGCCTGAGGCACCGGTGA CAGGCACAGGTACGGATATG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 157; Mature: 157
Protein sequence:
>157_residues MKINAFVWMILALLASTPPLGAEPVQLDEDSEPRLDMPCPPHTPLRFVQTKGRVNQSLEVRYVDARTIAFKLDKSGRCSR HEQGTATIKENWWLGAETDENETGDMIPVREYVFEKSKQCTIYVRIDETEWKQATVKESSQCSKSCPASEEAMGNEK
Sequences:
>Translated_157_residues MKINAFVWMILALLASTPPLGAEPVQLDEDSEPRLDMPCPPHTPLRFVQTKGRVNQSLEVRYVDARTIAFKLDKSGRCSR HEQGTATIKENWWLGAETDENETGDMIPVREYVFEKSKQCTIYVRIDETEWKQATVKESSQCSKSCPASEEAMGNEK >Mature_157_residues MKINAFVWMILALLASTPPLGAEPVQLDEDSEPRLDMPCPPHTPLRFVQTKGRVNQSLEVRYVDARTIAFKLDKSGRCSR HEQGTATIKENWWLGAETDENETGDMIPVREYVFEKSKQCTIYVRIDETEWKQATVKESSQCSKSCPASEEAMGNEK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17823; Mature: 17823
Theoretical pI: Translated: 4.91; Mature: 4.91
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.2 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 6.4 %Cys+Met (Translated Protein) 3.2 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 6.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKINAFVWMILALLASTPPLGAEPVQLDEDSEPRLDMPCPPHTPLRFVQTKGRVNQSLEV CCCHHHHHHHHHHHHCCCCCCCCCEECCCCCCCCCCCCCCCCCCCEEEECCCCCCCCEEE RYVDARTIAFKLDKSGRCSRHEQGTATIKENWWLGAETDENETGDMIPVREYVFEKSKQC EEECCEEEEEEECCCCCCCCCCCCCEEEECCEEECCCCCCCCCCCCCHHHHHHHCCCCCE TIYVRIDETEWKQATVKESSQCSKSCPASEEAMGNEK EEEEEECCCCCHHHHHHHHHHHHHCCCCCHHHCCCCC >Mature Secondary Structure MKINAFVWMILALLASTPPLGAEPVQLDEDSEPRLDMPCPPHTPLRFVQTKGRVNQSLEV CCCHHHHHHHHHHHHCCCCCCCCCEECCCCCCCCCCCCCCCCCCCEEEECCCCCCCCEEE RYVDARTIAFKLDKSGRCSRHEQGTATIKENWWLGAETDENETGDMIPVREYVFEKSKQC EEECCEEEEEEECCCCCCCCCCCCCEEEECCEEECCCCCCCCCCCCCHHHHHHHCCCCCE TIYVRIDETEWKQATVKESSQCSKSCPASEEAMGNEK EEEEEECCCCCHHHHHHHHHHHHHCCCCCHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA