Definition Geobacter bemidjiensis Bem chromosome, complete genome.
Accession NC_011146
Length 4,615,150

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The map label for this gene is 197117154

Identifier: 197117154

GI number: 197117154

Start: 893368

End: 893697

Strand: Reverse

Name: 197117154

Synonym: Gbem_0759

Alternate gene names: NA

Gene position: 893697-893368 (Counterclockwise)

Preceding gene: 197117155

Following gene: 197117153

Centisome position: 19.36

GC content: 56.97

Gene sequence:

>330_bases
ATGAAAAAAGCAGTTTCGGTAATGGTTCTGGTTGCAGTCGCGGCACTCTCCATCCTCTGCTTCAGCGGCATCGCGAGCGC
CGGAGAAGAGATCAAGATGGTGGGCGTGATCACCAAGATCGAGATCGCCGGCAAGGACGCTAAGACCGCTACCGCCACCC
TAAAGGACAACAAGACCGAGGCATTGGTGGTGATCACCGTGAACGACGACCTCACCCTGGACAAGTTCAAGGACCACAGG
ATCGTGGAGGGGGACGAGATCCGCTGCAAGTATGAAGCGATCGACGGCAAGAACGTGTCCAAGCTCTTCAGGAAGACCGC
CGGCTGCTGA

Upstream 100 bases:

>100_bases
TCGAAGTTAAATTCTAAAAGCAGCATCAGACGACAGTTGGGACAACAAACGGCGGGGCGGCAAGCCAAAGGCTGCCGCCC
CGCCGAAAAGGAGAACGAAG

Downstream 100 bases:

>100_bases
TGCCCAGGCAGTGACTTTTATTCCGATTTGCTCCTAACGCTGTAGTTTCCCGAGATTACAGCGTTCATTTTGGCCTTTTA
CATCATATTATATGAATATT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 109; Mature: 109

Protein sequence:

>109_residues
MKKAVSVMVLVAVAALSILCFSGIASAGEEIKMVGVITKIEIAGKDAKTATATLKDNKTEALVVITVNDDLTLDKFKDHR
IVEGDEIRCKYEAIDGKNVSKLFRKTAGC

Sequences:

>Translated_109_residues
MKKAVSVMVLVAVAALSILCFSGIASAGEEIKMVGVITKIEIAGKDAKTATATLKDNKTEALVVITVNDDLTLDKFKDHR
IVEGDEIRCKYEAIDGKNVSKLFRKTAGC
>Mature_109_residues
MKKAVSVMVLVAVAALSILCFSGIASAGEEIKMVGVITKIEIAGKDAKTATATLKDNKTEALVVITVNDDLTLDKFKDHR
IVEGDEIRCKYEAIDGKNVSKLFRKTAGC

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 11687; Mature: 11687

Theoretical pI: Translated: 8.49; Mature: 8.49

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.8 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
5.5 %Cys+Met (Translated Protein)
2.8 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
5.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKAVSVMVLVAVAALSILCFSGIASAGEEIKMVGVITKIEIAGKDAKTATATLKDNKTE
CCHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEEEEEECCCCCCCEEEEECCCCCC
ALVVITVNDDLTLDKFKDHRIVEGDEIRCKYEAIDGKNVSKLFRKTAGC
EEEEEEECCCCEECCCCCCCCCCCCCEEEEEEECCCCCHHHHHHHHCCC
>Mature Secondary Structure
MKKAVSVMVLVAVAALSILCFSGIASAGEEIKMVGVITKIEIAGKDAKTATATLKDNKTE
CCHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEEEEEECCCCCCCEEEEECCCCCC
ALVVITVNDDLTLDKFKDHRIVEGDEIRCKYEAIDGKNVSKLFRKTAGC
EEEEEEECCCCEECCCCCCCCCCCCCEEEEEEECCCCCHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA