Definition | Geobacter bemidjiensis Bem chromosome, complete genome. |
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Accession | NC_011146 |
Length | 4,615,150 |
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The map label for this gene is cheY-10 [H]
Identifier: 197117138
GI number: 197117138
Start: 877490
End: 877888
Strand: Direct
Name: cheY-10 [H]
Synonym: Gbem_0743
Alternate gene names: 197117138
Gene position: 877490-877888 (Clockwise)
Preceding gene: 197117137
Following gene: 197117139
Centisome position: 19.01
GC content: 60.15
Gene sequence:
>399_bases ATGGAGAAAAACAGGATCCTTGTAGTCGAGGACGAGGAGAGCTTGCTGAAACTGGAGAGCATACTCTTCACCTCGAAGGG GTACCAGGTGACCGGCGTCAGGGGCGGGGTCGATGCCTTGCGCTCCATCTCGCAGGATCGGCCGGATCTCGTGGTGCTCG ACATCATGCTTCCCGACATGGATGGGTTCGAGGTATGCCGCAGCATCAAGGAGGACCCGGAGACGAGGTCCATTCCCGTT GTCATGCTCACCGCGAAAAAGAGCAGCCGCGACCTTGAGGCCGGCCGCGTAGCCGGGGCCGACGCCTACATCACCAAGCC TTTCAAATCGGTGAAGGTGCTCGAGGTGATCGGGGGGCTTTTGAAGAACCAGGCGACCGGCAGGGGAGACCGTTCTTGA
Upstream 100 bases:
>100_bases CTCGGCATCGGCCGGGTCGCCGGCAGGATGCTGATCCTGCTCGACATGGAAAAGGTGCTGGACGTAGGGCTTTTGTAGCA GGCCGCGGGGAGGGAGTCGC
Downstream 100 bases:
>100_bases CGACACAGGAGCTGCAGGAAATACAGGTTGCCTGCCTGAAGATGGGAGACGGTCTCTACGCCGTCGACATCATGAGGATC AGGGAGATAATCCGGGTCCC
Product: chemotaxis protein CheY
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 132; Mature: 132
Protein sequence:
>132_residues MEKNRILVVEDEESLLKLESILFTSKGYQVTGVRGGVDALRSISQDRPDLVVLDIMLPDMDGFEVCRSIKEDPETRSIPV VMLTAKKSSRDLEAGRVAGADAYITKPFKSVKVLEVIGGLLKNQATGRGDRS
Sequences:
>Translated_132_residues MEKNRILVVEDEESLLKLESILFTSKGYQVTGVRGGVDALRSISQDRPDLVVLDIMLPDMDGFEVCRSIKEDPETRSIPV VMLTAKKSSRDLEAGRVAGADAYITKPFKSVKVLEVIGGLLKNQATGRGDRS >Mature_132_residues MEKNRILVVEDEESLLKLESILFTSKGYQVTGVRGGVDALRSISQDRPDLVVLDIMLPDMDGFEVCRSIKEDPETRSIPV VMLTAKKSSRDLEAGRVAGADAYITKPFKSVKVLEVIGGLLKNQATGRGDRS
Specific function: Could be member of the two-component regulatory system yclK/yclJ [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 response regulatory domain [H]
Homologues:
Organism=Escherichia coli, GI1786599, Length=118, Percent_Identity=36.4406779661017, Blast_Score=80, Evalue=3e-17, Organism=Escherichia coli, GI1789809, Length=125, Percent_Identity=36, Blast_Score=78, Evalue=2e-16, Organism=Escherichia coli, GI1788394, Length=124, Percent_Identity=37.0967741935484, Blast_Score=75, Evalue=1e-15, Organism=Escherichia coli, GI1790860, Length=123, Percent_Identity=31.7073170731707, Blast_Score=69, Evalue=1e-13, Organism=Escherichia coli, GI87082012, Length=120, Percent_Identity=31.6666666666667, Blast_Score=67, Evalue=4e-13, Organism=Escherichia coli, GI1787375, Length=121, Percent_Identity=31.404958677686, Blast_Score=66, Evalue=6e-13, Organism=Escherichia coli, GI1788191, Length=112, Percent_Identity=31.25, Blast_Score=66, Evalue=1e-12, Organism=Escherichia coli, GI1788550, Length=105, Percent_Identity=33.3333333333333, Blast_Score=65, Evalue=2e-12, Organism=Escherichia coli, GI1786911, Length=103, Percent_Identity=33.0097087378641, Blast_Score=63, Evalue=8e-12, Organism=Escherichia coli, GI1788713, Length=107, Percent_Identity=32.7102803738318, Blast_Score=62, Evalue=1e-11, Organism=Escherichia coli, GI1790552, Length=120, Percent_Identity=35, Blast_Score=62, Evalue=1e-11, Organism=Escherichia coli, GI1786784, Length=121, Percent_Identity=29.7520661157025, Blast_Score=62, Evalue=2e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011006 - InterPro: IPR001867 - InterPro: IPR016032 - InterPro: IPR001789 - InterPro: IPR011991 [H]
Pfam domain/function: PF00072 Response_reg; PF00486 Trans_reg_C [H]
EC number: NA
Molecular weight: Translated: 14480; Mature: 14480
Theoretical pI: Translated: 5.31; Mature: 5.31
Prosite motif: PS50110 RESPONSE_REGULATORY
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEKNRILVVEDEESLLKLESILFTSKGYQVTGVRGGVDALRSISQDRPDLVVLDIMLPDM CCCCCEEEEECCHHHHHHHHHHHCCCCCEEEECCCCHHHHHHHCCCCCCEEEEEEECCCC DGFEVCRSIKEDPETRSIPVVMLTAKKSSRDLEAGRVAGADAYITKPFKSVKVLEVIGGL CHHHHHHHHHCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCEEECCCHHHHHHHHHHHH LKNQATGRGDRS HHCCCCCCCCCC >Mature Secondary Structure MEKNRILVVEDEESLLKLESILFTSKGYQVTGVRGGVDALRSISQDRPDLVVLDIMLPDM CCCCCEEEEECCHHHHHHHHHHHCCCCCEEEECCCCHHHHHHHCCCCCCEEEEEEECCCC DGFEVCRSIKEDPETRSIPVVMLTAKKSSRDLEAGRVAGADAYITKPFKSVKVLEVIGGL CHHHHHHHHHCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCEEECCCHHHHHHHHHHHH LKNQATGRGDRS HHCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8969502; 9384377 [H]