| Definition | Geobacter bemidjiensis Bem chromosome, complete genome. |
|---|---|
| Accession | NC_011146 |
| Length | 4,615,150 |
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The map label for this gene is cheY-6 [H]
Identifier: 197117134
GI number: 197117134
Start: 873012
End: 873377
Strand: Direct
Name: cheY-6 [H]
Synonym: Gbem_0739
Alternate gene names: 197117134
Gene position: 873012-873377 (Clockwise)
Preceding gene: 197117133
Following gene: 197117135
Centisome position: 18.92
GC content: 56.28
Gene sequence:
>366_bases GTGAAGAGGATTTTGATAGCAGAGGATTCGAACACCATGCGTTCCATGCTGGTTTCGACCATAGATGAGTTGGAGAAGTA CAGCATAGTGGAAGCCGCCAGCGGGTTCGAAGCCCTGCGCCTTTTGCCGCGCGAGCAGGTGGACCTGATCATCACCGACA TCAACATGCCCGACATAAACGGCCTGGAGCTGATCAGCTACGTGCGCAACAACCCCAACTACCAGTTGATCCCGCTCTTC ATCGTTTCCACCGAGAGCGGCGAGAAGGACCTGGAGAAGGGACTGGCGCTGGGGGCAAACGAGTACATCGTGAAGCCGTT CGATCCGGTCCGGCTGCAGGAGCTGGTCTCCAAGTATCTCGACTAA
Upstream 100 bases:
>100_bases ACCGATTCGCTGGAGATATTCCTGAGCCAGGCCGGCATCGCGATGGAGAAAGCCCTGCTGCAGCGCAGGCTGCAAGACCA GGGACGGGGAGAAATTTGAC
Downstream 100 bases:
>100_bases ACTGCCGTTCAATGTTCAACGTTCAACGTTCGAGAGGCATTCCGGCCCGTAGCGCCCGCACCGCGACGGCGCCCAAAGCC GAAAGCCGTTCAATGTTCAA
Product: chemotaxis protein CheY
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 121; Mature: 121
Protein sequence:
>121_residues MKRILIAEDSNTMRSMLVSTIDELEKYSIVEAASGFEALRLLPREQVDLIITDINMPDINGLELISYVRNNPNYQLIPLF IVSTESGEKDLEKGLALGANEYIVKPFDPVRLQELVSKYLD
Sequences:
>Translated_121_residues MKRILIAEDSNTMRSMLVSTIDELEKYSIVEAASGFEALRLLPREQVDLIITDINMPDINGLELISYVRNNPNYQLIPLF IVSTESGEKDLEKGLALGANEYIVKPFDPVRLQELVSKYLD >Mature_121_residues MKRILIAEDSNTMRSMLVSTIDELEKYSIVEAASGFEALRLLPREQVDLIITDINMPDINGLELISYVRNNPNYQLIPLF IVSTESGEKDLEKGLALGANEYIVKPFDPVRLQELVSKYLD
Specific function: Involved in the transmission of sensory signals from the chemoreceptors to the flagellar motors. CheY seems to regulate the clockwise (CW) rotation [H]
COG id: COG0784
COG function: function code T; FOG: CheY-like receiver
Gene ontology:
Cell location: Cytoplasm (Potential) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 response regulatory domain [H]
Homologues:
Organism=Escherichia coli, GI1787487, Length=120, Percent_Identity=38.3333333333333, Blast_Score=73, Evalue=7e-15, Organism=Escherichia coli, GI1788191, Length=119, Percent_Identity=30.2521008403361, Blast_Score=72, Evalue=7e-15, Organism=Escherichia coli, GI1790863, Length=123, Percent_Identity=36.5853658536585, Blast_Score=69, Evalue=1e-13, Organism=Escherichia coli, GI1786599, Length=117, Percent_Identity=32.4786324786325, Blast_Score=62, Evalue=1e-11, Organism=Escherichia coli, GI1788713, Length=104, Percent_Identity=34.6153846153846, Blast_Score=59, Evalue=9e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011006 - InterPro: IPR001789 [H]
Pfam domain/function: PF00072 Response_reg [H]
EC number: NA
Molecular weight: Translated: 13717; Mature: 13717
Theoretical pI: Translated: 4.22; Mature: 4.22
Prosite motif: PS50110 RESPONSE_REGULATORY
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKRILIAEDSNTMRSMLVSTIDELEKYSIVEAASGFEALRLLPREQVDLIITDINMPDIN CCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHCCCCCEEEEEEECCCCCCC GLELISYVRNNPNYQLIPLFIVSTESGEKDLEKGLALGANEYIVKPFDPVRLQELVSKYL HHHHHHHHHCCCCEEEEEEEEEECCCCHHHHHHHHHCCCCCEEECCCCHHHHHHHHHHHC D C >Mature Secondary Structure MKRILIAEDSNTMRSMLVSTIDELEKYSIVEAASGFEALRLLPREQVDLIITDINMPDIN CCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHCCCCCEEEEEEECCCCCCC GLELISYVRNNPNYQLIPLFIVSTESGEKDLEKGLALGANEYIVKPFDPVRLQELVSKYL HHHHHHHHHCCCCEEEEEEEEEECCCCHHHHHHHHHCCCCCEEECCCCHHHHHHHHHHHC D C
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9720026 [H]