| Definition | Geobacter bemidjiensis Bem chromosome, complete genome. |
|---|---|
| Accession | NC_011146 |
| Length | 4,615,150 |
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The map label for this gene is hisI
Identifier: 197117121
GI number: 197117121
Start: 857967
End: 858344
Strand: Direct
Name: hisI
Synonym: Gbem_0726
Alternate gene names: 197117121
Gene position: 857967-858344 (Clockwise)
Preceding gene: 197117120
Following gene: 197117122
Centisome position: 18.59
GC content: 55.56
Gene sequence:
>378_bases ATGATAAAGATCGATTTCGAAAAGATGGGTGGATTGATCCCGGCAGTTATCCAGGACAACGAGAGCGGGGAAGTATTGAT GGTTGCGTTCATGGACGAGAAGACCCTGAACCTGACCCTGGAAAGCGGCAAGACCTGGTTCTTCAGCCGCACCAGGAACA AGTACTGGATGAAAGGGGAGGAATCCGGCAATACGCAGGACGTGGTCGAGGTGCTGACCGACTGCGACGCCGACACCGTC GTCATCAAGGTGAAGCAAAACGGTCCCGCCGCCTGCCACACCGGCAACCGCAGCTGCTTCTATGTCAGATACGAGAACGG CGCCTGGGTCGAGCACTCCAACCCGCTCTTCGATCCCAACACCGTCTATAAGAAGTAA
Upstream 100 bases:
>100_bases TGGTTTTGATGTCTACATAATCGTTGACATAGCTCGCGCCCAAGGTGTATTAAAAGACACTTTTTTATCAATAAATGCTG CGGAAGGACTGAGAGAAACC
Downstream 100 bases:
>100_bases GACAAAACCATTGGCAAGGAGGAAATCTGAGAACTTCTGAGAAAGCTTTGGATTTTCTCAAGCCTTTTGCTTGTCTCAGA TTTCCTCAGAAGTTCTCCTT
Product: phosphoribosyl-AMP cyclohydrolase
Products: NA
Alternate protein names: PRA-CH
Number of amino acids: Translated: 125; Mature: 125
Protein sequence:
>125_residues MIKIDFEKMGGLIPAVIQDNESGEVLMVAFMDEKTLNLTLESGKTWFFSRTRNKYWMKGEESGNTQDVVEVLTDCDADTV VIKVKQNGPAACHTGNRSCFYVRYENGAWVEHSNPLFDPNTVYKK
Sequences:
>Translated_125_residues MIKIDFEKMGGLIPAVIQDNESGEVLMVAFMDEKTLNLTLESGKTWFFSRTRNKYWMKGEESGNTQDVVEVLTDCDADTV VIKVKQNGPAACHTGNRSCFYVRYENGAWVEHSNPLFDPNTVYKK >Mature_125_residues MIKIDFEKMGGLIPAVIQDNESGEVLMVAFMDEKTLNLTLESGKTWFFSRTRNKYWMKGEESGNTQDVVEVLTDCDADTV VIKVKQNGPAACHTGNRSCFYVRYENGAWVEHSNPLFDPNTVYKK
Specific function: Histidine biosynthesis; second step. Histidine biosynthesis; third step. [C]
COG id: COG0139
COG function: function code E; Phosphoribosyl-AMP cyclohydrolase
Gene ontology:
Cell location: Cytoplasm
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the PRA-CH family
Homologues:
Organism=Escherichia coli, GI2367128, Length=98, Percent_Identity=48.9795918367347, Blast_Score=104, Evalue=2e-24, Organism=Saccharomyces cerevisiae, GI6319819, Length=75, Percent_Identity=36, Blast_Score=66, Evalue=1e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): HIS3_GEOBB (B5EE14)
Other databases:
- EMBL: CP001124 - RefSeq: YP_002137548.1 - ProteinModelPortal: B5EE14 - SMR: B5EE14 - GeneID: 6783559 - GenomeReviews: CP001124_GR - KEGG: gbm:Gbem_0726 - HOGENOM: HBG294308 - OMA: LWLKGES - ProtClustDB: PRK00051 - GO: GO:0005737 - HAMAP: MF_01021 - InterPro: IPR002496 - ProDom: PD002610
Pfam domain/function: PF01502 PRA-CH
EC number: =3.5.4.19
Molecular weight: Translated: 14190; Mature: 14190
Theoretical pI: Translated: 4.92; Mature: 4.92
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.4 %Cys (Translated Protein) 4.0 %Met (Translated Protein) 6.4 %Cys+Met (Translated Protein) 2.4 %Cys (Mature Protein) 4.0 %Met (Mature Protein) 6.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIKIDFEKMGGLIPAVIQDNESGEVLMVAFMDEKTLNLTLESGKTWFFSRTRNKYWMKGE CEEEEHHHHCCEEEEEEECCCCCCEEEEEEECCCEEEEEEECCCEEEEEECCCEEEEECC ESGNTQDVVEVLTDCDADTVVIKVKQNGPAACHTGNRSCFYVRYENGAWVEHSNPLFDPN CCCCHHHHHHHHHCCCCCEEEEEEECCCCEEEECCCCCEEEEEECCCEEEECCCCCCCCC TVYKK CCCCC >Mature Secondary Structure MIKIDFEKMGGLIPAVIQDNESGEVLMVAFMDEKTLNLTLESGKTWFFSRTRNKYWMKGE CEEEEHHHHCCEEEEEEECCCCCCEEEEEEECCCEEEEEEECCCEEEEEECCCEEEEECC ESGNTQDVVEVLTDCDADTVVIKVKQNGPAACHTGNRSCFYVRYENGAWVEHSNPLFDPN CCCCHHHHHHHHHCCCCCEEEEEEECCCCEEEECCCCCEEEEEECCCEEEECCCCCCCCC TVYKK CCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA