Definition Geobacter bemidjiensis Bem chromosome, complete genome.
Accession NC_011146
Length 4,615,150

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The map label for this gene is 197117119

Identifier: 197117119

GI number: 197117119

Start: 856054

End: 856953

Strand: Direct

Name: 197117119

Synonym: Gbem_0724

Alternate gene names: NA

Gene position: 856054-856953 (Clockwise)

Preceding gene: 197117118

Following gene: 197117120

Centisome position: 18.55

GC content: 59.11

Gene sequence:

>900_bases
ATGATCGAAGGCATTTTTGTTGAAGGGCTTATTTACGGCATCATGGTTCTCGGGGTGTTCATCTCCTTCCGGATCCTCGA
CTTTCCCGACCTTACCGTCGACGGTTCCTTTCCCCTGGGGGCCGCTCTCATGGTGCAGTGCCTCCTCATGGGGATGAACG
GCTGGCTCGCGCTTCTGGTGGCCTTTGCCGGCGGTGTTACGGCAGGCGCCGTCACGGCGCTGATCCACAACCACTTAAGG
GTGCCGAACCTTTTGGCCGGTATCCTCACCATGACCATGCTCTACTCGGTCAACATCCGCATTCTGGGCAACCGCGCCAA
TGTCCCCATCCTGGATCAGCCGACCCTCCTGAAGCAGGTCACCGAGAAGTTCACCGGCATCATCCCGGACGAGTACATCC
TCCTGGTGTTTTTCCTGGTCGTCGCCCTGGTGGTAAAGGTGCTGCTCGACCTCTTTTTCCGCACCGACCTCGGCATGACC
CTGGGCGCCATGGGGAATAACGAGCAGATGGTCATCTCGCAGGGGGTGAACCCCAAGACCCTGAAGACCATCGGGGTCGG
CCTCTCCAACGGCCTGGTCGCAGTCTCCGGCGCCTTTGCCGCGCAGTACCTGGGCTTTGCCGACGTGGGGCTGGGCCAGG
GAATAATCGTTTCCGGCCTGGCTTCGGTCATGATCGGCGAATTCCTGATGCTCAAGAGCAACCGGATCGGTGTGCTCACC
TTCTGTGCGCTTGCCGGTTCCATCTGCTTTTACGCCGTCATGTATGTCGGGCGCTTCTACGGGTACCTCATCCACATGAC
CCCGAGCGACCTGAACCTCATCAAGGGCGTGCTGATCATCGTCCTGCTCATCGCGACCCAGGCGAAGAAACTGAAGGTCT
CGTTTAAGGTGGCAAAATGA

Upstream 100 bases:

>100_bases
TCAGAAGTTCGTAGCTTGCCCACCGTAGCGCTTCAGCGCGTAGGTGGGTGCCAATGGTTTTGATTTTTTTGTTTCTTCAG
AAGGGTAAACGGTTCCAGTT

Downstream 100 bases:

>100_bases
TCGAGCTTAAAAACGTTTCCGTCGTCTTTGGCCAGGGGACCATCAACGAAAACAAGGCCCTGAAGAACATCAACCTCAAG
GTGAAAGAAGGCGACTTCAT

Product: ABC transporter membrane protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 299; Mature: 299

Protein sequence:

>299_residues
MIEGIFVEGLIYGIMVLGVFISFRILDFPDLTVDGSFPLGAALMVQCLLMGMNGWLALLVAFAGGVTAGAVTALIHNHLR
VPNLLAGILTMTMLYSVNIRILGNRANVPILDQPTLLKQVTEKFTGIIPDEYILLVFFLVVALVVKVLLDLFFRTDLGMT
LGAMGNNEQMVISQGVNPKTLKTIGVGLSNGLVAVSGAFAAQYLGFADVGLGQGIIVSGLASVMIGEFLMLKSNRIGVLT
FCALAGSICFYAVMYVGRFYGYLIHMTPSDLNLIKGVLIIVLLIATQAKKLKVSFKVAK

Sequences:

>Translated_299_residues
MIEGIFVEGLIYGIMVLGVFISFRILDFPDLTVDGSFPLGAALMVQCLLMGMNGWLALLVAFAGGVTAGAVTALIHNHLR
VPNLLAGILTMTMLYSVNIRILGNRANVPILDQPTLLKQVTEKFTGIIPDEYILLVFFLVVALVVKVLLDLFFRTDLGMT
LGAMGNNEQMVISQGVNPKTLKTIGVGLSNGLVAVSGAFAAQYLGFADVGLGQGIIVSGLASVMIGEFLMLKSNRIGVLT
FCALAGSICFYAVMYVGRFYGYLIHMTPSDLNLIKGVLIIVLLIATQAKKLKVSFKVAK
>Mature_299_residues
MIEGIFVEGLIYGIMVLGVFISFRILDFPDLTVDGSFPLGAALMVQCLLMGMNGWLALLVAFAGGVTAGAVTALIHNHLR
VPNLLAGILTMTMLYSVNIRILGNRANVPILDQPTLLKQVTEKFTGIIPDEYILLVFFLVVALVVKVLLDLFFRTDLGMT
LGAMGNNEQMVISQGVNPKTLKTIGVGLSNGLVAVSGAFAAQYLGFADVGLGQGIIVSGLASVMIGEFLMLKSNRIGVLT
FCALAGSICFYAVMYVGRFYGYLIHMTPSDLNLIKGVLIIVLLIATQAKKLKVSFKVAK

Specific function: Unknown

COG id: COG4120

COG function: function code R; ABC-type uncharacterized transport system, permease component

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001851 [H]

Pfam domain/function: PF02653 BPD_transp_2 [H]

EC number: NA

Molecular weight: Translated: 32012; Mature: 32012

Theoretical pI: Translated: 9.07; Mature: 9.07

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
4.7 %Met     (Translated Protein)
5.7 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
4.7 %Met     (Mature Protein)
5.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIEGIFVEGLIYGIMVLGVFISFRILDFPDLTVDGSFPLGAALMVQCLLMGMNGWLALLV
CCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCEECCCCCHHHHHHHHHHHHCCCHHHHHHH
AFAGGVTAGAVTALIHNHLRVPNLLAGILTMTMLYSVNIRILGNRANVPILDQPTLLKQV
HHHCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCEEEEEECCCCCCCCCCCHHHHHH
TEKFTGIIPDEYILLVFFLVVALVVKVLLDLFFRTDLGMTLGAMGNNEQMVISQGVNPKT
HHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEECCCCCCCEEEEECCCCCHH
LKTIGVGLSNGLVAVSGAFAAQYLGFADVGLGQGIIVSGLASVMIGEFLMLKSNRIGVLT
HHHHHCCCCCCEEEEHHHHHHHHHCHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHH
FCALAGSICFYAVMYVGRFYGYLIHMTPSDLNLIKGVLIIVLLIATQAKKLKVSFKVAK
HHHHHHHHHHHHHHHHHHHHHEEEEECCCHHHHHHHHHHHHHHHHCCCHHEEEEEEECC
>Mature Secondary Structure
MIEGIFVEGLIYGIMVLGVFISFRILDFPDLTVDGSFPLGAALMVQCLLMGMNGWLALLV
CCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCEECCCCCHHHHHHHHHHHHCCCHHHHHHH
AFAGGVTAGAVTALIHNHLRVPNLLAGILTMTMLYSVNIRILGNRANVPILDQPTLLKQV
HHHCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCEEEEEECCCCCCCCCCCHHHHHH
TEKFTGIIPDEYILLVFFLVVALVVKVLLDLFFRTDLGMTLGAMGNNEQMVISQGVNPKT
HHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEECCCCCCCEEEEECCCCCHH
LKTIGVGLSNGLVAVSGAFAAQYLGFADVGLGQGIIVSGLASVMIGEFLMLKSNRIGVLT
HHHHHCCCCCCEEEEHHHHHHHHHCHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHH
FCALAGSICFYAVMYVGRFYGYLIHMTPSDLNLIKGVLIIVLLIATQAKKLKVSFKVAK
HHHHHHHHHHHHHHHHHHHHHEEEEECCCHHHHHHHHHHHHHHHHCCCHHEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9823893 [H]