| Definition | Geobacter bemidjiensis Bem chromosome, complete genome. |
|---|---|
| Accession | NC_011146 |
| Length | 4,615,150 |
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The map label for this gene is 197117115
Identifier: 197117115
GI number: 197117115
Start: 851509
End: 852195
Strand: Direct
Name: 197117115
Synonym: Gbem_0720
Alternate gene names: NA
Gene position: 851509-852195 (Clockwise)
Preceding gene: 197117113
Following gene: 197117116
Centisome position: 18.45
GC content: 58.81
Gene sequence:
>687_bases ATGTCAGAAATAAGGATACTCATAGTCGTAAAAGATGCTGAGACAGCCAGCGCGTACGTCGATGCGGTGACAGAGAGTGG AGCCACCTGTGACGTCGCGCACTCCTTCCAGGAGATGTCCGCCCTGGCGACAGACAGGGTCTACAACGGTATTGTCGTCG ACATCCTTACCTTGGTGCGCTGCAGCAAGGAAGAGAAAGTCATAGCCTACGAGATTATCAACCTCTTCCCGGTATTGCGG GTCAAGTGGGAGCCGCGGCACAAGAAGATCAAGCTGACCCCGCTGGAGCAGAGCTTTTCGCCGGACACCGACTCGGCGCT TAGGTTTTTCATCCAGACCCGCTGCAAGGCCTTTCCCGCGCGGTCGCTGCGCAAGGAGAAGCGCAAGCTGGTCAACCTGA ACCTGCTTTACTGCCGTGACAACCGCTTCCTGGACGGGGAGGCGTGCAAGTCGTTCACCATCAACATCAGTCCGACCGGG GTGTTTCTGCACACAATGGAGGAATTCCGGGTCGGCGAAACGATCTGGCTCCGTTTTCTGGAGTTCGCCGACCAGACCCC AGTCGAGGCCACCGTCTGCTGGTCGCAGCGGTGGGGAGTCACCCGCTGCGTCCCCGGCGCCGGCGTCAAGTTCGAGTCTC TTACCGAGAGCCAGAGGCAGGACGTAGATCGCATCGTCAACCTCTGA
Upstream 100 bases:
>100_bases CCGAATGCGGTGACTTCAGACTTTCGCAATGCAGCAAGCTTTAAAAGCCATCCGTCGATTACTCCAGTAGCCTCATGGCA CCAAAGGAAGAAATACTCCG
Downstream 100 bases:
>100_bases ACCCTTCCCCAGCAGGAAATTCCATGTGCACTCTGCTTTTGGCCTGCCGCGCCCATCCGCGTTACCCCCTTGTCCTCCTC GCCAACAGGGACGAGTACTA
Product: PilZ domain-containing protein
Products: NA
Alternate protein names: PilZ Domain-Containing Protein
Number of amino acids: Translated: 228; Mature: 227
Protein sequence:
>228_residues MSEIRILIVVKDAETASAYVDAVTESGATCDVAHSFQEMSALATDRVYNGIVVDILTLVRCSKEEKVIAYEIINLFPVLR VKWEPRHKKIKLTPLEQSFSPDTDSALRFFIQTRCKAFPARSLRKEKRKLVNLNLLYCRDNRFLDGEACKSFTINISPTG VFLHTMEEFRVGETIWLRFLEFADQTPVEATVCWSQRWGVTRCVPGAGVKFESLTESQRQDVDRIVNL
Sequences:
>Translated_228_residues MSEIRILIVVKDAETASAYVDAVTESGATCDVAHSFQEMSALATDRVYNGIVVDILTLVRCSKEEKVIAYEIINLFPVLR VKWEPRHKKIKLTPLEQSFSPDTDSALRFFIQTRCKAFPARSLRKEKRKLVNLNLLYCRDNRFLDGEACKSFTINISPTG VFLHTMEEFRVGETIWLRFLEFADQTPVEATVCWSQRWGVTRCVPGAGVKFESLTESQRQDVDRIVNL >Mature_227_residues SEIRILIVVKDAETASAYVDAVTESGATCDVAHSFQEMSALATDRVYNGIVVDILTLVRCSKEEKVIAYEIINLFPVLRV KWEPRHKKIKLTPLEQSFSPDTDSALRFFIQTRCKAFPARSLRKEKRKLVNLNLLYCRDNRFLDGEACKSFTINISPTGV FLHTMEEFRVGETIWLRFLEFADQTPVEATVCWSQRWGVTRCVPGAGVKFESLTESQRQDVDRIVNL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 26057; Mature: 25926
Theoretical pI: Translated: 7.73; Mature: 7.73
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.1 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 3.1 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSEIRILIVVKDAETASAYVDAVTESGATCDVAHSFQEMSALATDRVYNGIVVDILTLVR CCCEEEEEEEECCCHHHHHHHHHHCCCCEEHHHHHHHHHHHHHHHHHHCHHHHHHHHHHH CSKEEKVIAYEIINLFPVLRVKWEPRHKKIKLTPLEQSFSPDTDSALRFFIQTRCKAFPA CCCCCCCHHHHHHHHHHEEEEEECCCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHCCH RSLRKEKRKLVNLNLLYCRDNRFLDGEACKSFTINISPTGVFLHTMEEFRVGETIWLRFL HHHHHHHHHHCCEEEEEEECCCEECCCCCCEEEEEECCCEEEEEEHHHHCCCHHHHHHHH EFADQTPVEATVCWSQRWGVTRCVPGAGVKFESLTESQRQDVDRIVNL HHCCCCCCEEEEEECCCCCCEEECCCCCCCHHHHHHHHHHHHHHHHCC >Mature Secondary Structure SEIRILIVVKDAETASAYVDAVTESGATCDVAHSFQEMSALATDRVYNGIVVDILTLVR CCEEEEEEEECCCHHHHHHHHHHCCCCEEHHHHHHHHHHHHHHHHHHCHHHHHHHHHHH CSKEEKVIAYEIINLFPVLRVKWEPRHKKIKLTPLEQSFSPDTDSALRFFIQTRCKAFPA CCCCCCCHHHHHHHHHHEEEEEECCCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHCCH RSLRKEKRKLVNLNLLYCRDNRFLDGEACKSFTINISPTGVFLHTMEEFRVGETIWLRFL HHHHHHHHHHCCEEEEEEECCCEECCCCCCEEEEEECCCEEEEEEHHHHCCCHHHHHHHH EFADQTPVEATVCWSQRWGVTRCVPGAGVKFESLTESQRQDVDRIVNL HHCCCCCCEEEEEECCCCCCEEECCCCCCCHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA