| Definition | Geobacter bemidjiensis Bem chromosome, complete genome. |
|---|---|
| Accession | NC_011146 |
| Length | 4,615,150 |
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The map label for this gene is 197117111
Identifier: 197117111
GI number: 197117111
Start: 848746
End: 849054
Strand: Reverse
Name: 197117111
Synonym: Gbem_0716
Alternate gene names: NA
Gene position: 849054-848746 (Counterclockwise)
Preceding gene: 197117114
Following gene: 197117108
Centisome position: 18.4
GC content: 56.31
Gene sequence:
>309_bases ATGAAGAAGATCGCCAGATCGGCAGCAGCACTTATCGTGGTATTCGCAGCGTCGCAGGCCCTGGCCGTCGGCAACGGCAA GAAGCTGGAGTGGAACACCTCCATGGGGAAGGTGGTTTTCGAGGGGAAAGACCACGCCGGCAAAGGGATGAAGTGCAACG AATGCCACACGAAGATCTTCAAGATGAAGAAAGATTCGGCCCAGATGAAGATGGCGGACATCAACGGCGGAAAGTACTGC GGCGAGTGCCACAACGGCAAGAGGGCGTTCAAGCCTGCCGGCAACTGTGCCAAGTGTCACAAGAAGTAG
Upstream 100 bases:
>100_bases ACTGAAACGACAGGGAAAGGAAGCCGCCTTGACAAAGAATTCGCCTGTGTTATCACAGGAAGGGTTTGTAATTAATGAGA CCACAGAGGAGAGGAGACTT
Downstream 100 bases:
>100_bases GCTGCCTCAACTGAAATTCAGCAGCAACCCGACGGCGGCAGCCCCAAGGATCACGGCCATAGGCGCTATGGCCGTGAACT GGAGCAGCAGGAATCCGGCG
Product: cytochrome c
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 102; Mature: 102
Protein sequence:
>102_residues MKKIARSAAALIVVFAASQALAVGNGKKLEWNTSMGKVVFEGKDHAGKGMKCNECHTKIFKMKKDSAQMKMADINGGKYC GECHNGKRAFKPAGNCAKCHKK
Sequences:
>Translated_102_residues MKKIARSAAALIVVFAASQALAVGNGKKLEWNTSMGKVVFEGKDHAGKGMKCNECHTKIFKMKKDSAQMKMADINGGKYC GECHNGKRAFKPAGNCAKCHKK >Mature_102_residues MKKIARSAAALIVVFAASQALAVGNGKKLEWNTSMGKVVFEGKDHAGKGMKCNECHTKIFKMKKDSAQMKMADINGGKYC GECHNGKRAFKPAGNCAKCHKK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 11019; Mature: 11019
Theoretical pI: Translated: 10.50; Mature: 10.50
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
5.9 %Cys (Translated Protein) 5.9 %Met (Translated Protein) 11.8 %Cys+Met (Translated Protein) 5.9 %Cys (Mature Protein) 5.9 %Met (Mature Protein) 11.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKIARSAAALIVVFAASQALAVGNGKKLEWNTSMGKVVFEGKDHAGKGMKCNECHTKIF CCHHHHHHHHHHHEEECCCEEECCCCCEEEEECCCCEEEEECCCCCCCCCCCHHHHHHHH KMKKDSAQMKMADINGGKYCGECHNGKRAFKPAGNCAKCHKK HCCCCCCEEEEEECCCCCEECCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure MKKIARSAAALIVVFAASQALAVGNGKKLEWNTSMGKVVFEGKDHAGKGMKCNECHTKIF CCHHHHHHHHHHHEEECCCEEECCCCCEEEEECCCCEEEEECCCCCCCCCCCHHHHHHHH KMKKDSAQMKMADINGGKYCGECHNGKRAFKPAGNCAKCHKK HCCCCCCEEEEEECCCCCEECCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA