| Definition | Geobacter bemidjiensis Bem chromosome, complete genome. |
|---|---|
| Accession | NC_011146 |
| Length | 4,615,150 |
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The map label for this gene is 197117095
Identifier: 197117095
GI number: 197117095
Start: 827243
End: 827734
Strand: Reverse
Name: 197117095
Synonym: Gbem_0699
Alternate gene names: NA
Gene position: 827734-827243 (Counterclockwise)
Preceding gene: 197117106
Following gene: 197117094
Centisome position: 17.94
GC content: 59.15
Gene sequence:
>492_bases ATGCCGGGCGTCAAGATCGATACCTCAGCGCTGAACCCGATCTATCTGGAGATGGGAGCGGCCGTGCAAGATTGCCAGCG CTTAGAGCTTTACATCTCCTTCATCGTCACCCTCCTTACCGACCGAAGCGACGGCAACCTCTCCGACCACGAATTCCGCG GGTACATGGAGAACCTGGGGAGCCAGACCTTGGGGCGCCTCGTGGAGGAGATCAAGCAGAGGGTCGGGTTCACCGACGAA GCCGTACTGGCGCTGCGCAAGGCCCAGAGGGCGCGCAACTTCCTGATCCACCGCTTCTACAACGAGCGCTCGAACCTCCT GCTGAGCCATGAGGGGCGGGAAAAAGCGCTTAAAGAAATCCAGGAGAAGCGGTCGGCGGTAAACATCGCCAACGGCATGC TGGACCCGGTCATGAACGACCTGATCAGGCTGAAGGGAATCGACCTGGAGCAGTTCAGGTCCGAGGTTGAGCAGAGATTC GAAAGCTCATAG
Upstream 100 bases:
>100_bases ACCAAAATTCTGCGCGAAACGGCTTCAGGTAATTAGCTGTTTATGACCTTTCTTTTTTGTGCTAATGCATTGGTAAAAAT TTTCCCTGAGAGGGCATGCC
Downstream 100 bases:
>100_bases ATAAGGAGCACATATGCTGCGGGATACGCAATCGCTTGGGGCCGTCGCCCACGTCATCCAACTTTCGGTCGCCCCGGTCT TTCTCCTCACGGCGGTTGGC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 163; Mature: 162
Protein sequence:
>163_residues MPGVKIDTSALNPIYLEMGAAVQDCQRLELYISFIVTLLTDRSDGNLSDHEFRGYMENLGSQTLGRLVEEIKQRVGFTDE AVLALRKAQRARNFLIHRFYNERSNLLLSHEGREKALKEIQEKRSAVNIANGMLDPVMNDLIRLKGIDLEQFRSEVEQRF ESS
Sequences:
>Translated_163_residues MPGVKIDTSALNPIYLEMGAAVQDCQRLELYISFIVTLLTDRSDGNLSDHEFRGYMENLGSQTLGRLVEEIKQRVGFTDE AVLALRKAQRARNFLIHRFYNERSNLLLSHEGREKALKEIQEKRSAVNIANGMLDPVMNDLIRLKGIDLEQFRSEVEQRF ESS >Mature_162_residues PGVKIDTSALNPIYLEMGAAVQDCQRLELYISFIVTLLTDRSDGNLSDHEFRGYMENLGSQTLGRLVEEIKQRVGFTDEA VLALRKAQRARNFLIHRFYNERSNLLLSHEGREKALKEIQEKRSAVNIANGMLDPVMNDLIRLKGIDLEQFRSEVEQRFE SS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18702; Mature: 18570
Theoretical pI: Translated: 5.76; Mature: 5.76
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPGVKIDTSALNPIYLEMGAAVQDCQRLELYISFIVTLLTDRSDGNLSDHEFRGYMENLG CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHH SQTLGRLVEEIKQRVGFTDEAVLALRKAQRARNFLIHRFYNERSNLLLSHEGREKALKEI HHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCEEECCCCHHHHHHHH QEKRSAVNIANGMLDPVMNDLIRLKGIDLEQFRSEVEQRFESS HHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCC >Mature Secondary Structure PGVKIDTSALNPIYLEMGAAVQDCQRLELYISFIVTLLTDRSDGNLSDHEFRGYMENLG CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHH SQTLGRLVEEIKQRVGFTDEAVLALRKAQRARNFLIHRFYNERSNLLLSHEGREKALKEI HHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCEEECCCCHHHHHHHH QEKRSAVNIANGMLDPVMNDLIRLKGIDLEQFRSEVEQRFESS HHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA