Definition Geobacter bemidjiensis Bem chromosome, complete genome.
Accession NC_011146
Length 4,615,150

Click here to switch to the map view.

The map label for this gene is 197117064

Identifier: 197117064

GI number: 197117064

Start: 791694

End: 791942

Strand: Reverse

Name: 197117064

Synonym: Gbem_0668

Alternate gene names: NA

Gene position: 791942-791694 (Counterclockwise)

Preceding gene: 197117065

Following gene: 197117063

Centisome position: 17.16

GC content: 55.42

Gene sequence:

>249_bases
ATGAAAACGAGAATGCGTATGTCGGCGGCAGTCAACACTGCCATAGTCTTCTTCATGACGACAGCTAACGCTTTCGCCGC
CTCTACCAGCAAGGTCTTCGTCAGCAAGCTGGGGATCTTCATTTTCCTGGGCTTTTGCGCACTGGTGCTCGTGGTGCAGT
TGATCCCGGCCATGATGACCCTTTACGGCATGCTGAAGGGGCTTGGCAAGGAGCAGGAGAAATCGCCGTCGCGCGTGAAG
TCGCACTAG

Upstream 100 bases:

>100_bases
GACAGCCTGAGACCGCAGCTCGCATGACAATAGCCCAGGAACAAACCGGGTATCGCGCCCGGCACGTCCTTTTCAACATC
AACTAAAAAGGAGGAACACC

Downstream 100 bases:

>100_bases
CCGCCAGGCTTTCATTACCGTCAAAAAGGAGCCACTACCATGGTCGAGCAATCACTGGGATCGATAGGACAGATCAAGGA
GGTCTTCACTCTGGTCGACT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 82; Mature: 82

Protein sequence:

>82_residues
MKTRMRMSAAVNTAIVFFMTTANAFAASTSKVFVSKLGIFIFLGFCALVLVVQLIPAMMTLYGMLKGLGKEQEKSPSRVK
SH

Sequences:

>Translated_82_residues
MKTRMRMSAAVNTAIVFFMTTANAFAASTSKVFVSKLGIFIFLGFCALVLVVQLIPAMMTLYGMLKGLGKEQEKSPSRVK
SH
>Mature_82_residues
MKTRMRMSAAVNTAIVFFMTTANAFAASTSKVFVSKLGIFIFLGFCALVLVVQLIPAMMTLYGMLKGLGKEQEKSPSRVK
SH

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 8965; Mature: 8965

Theoretical pI: Translated: 11.18; Mature: 11.18

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
8.5 %Met     (Translated Protein)
9.8 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
8.5 %Met     (Mature Protein)
9.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKTRMRMSAAVNTAIVFFMTTANAFAASTSKVFVSKLGIFIFLGFCALVLVVQLIPAMMT
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LYGMLKGLGKEQEKSPSRVKSH
HHHHHHHCCCCCCCCCCCCCCC
>Mature Secondary Structure
MKTRMRMSAAVNTAIVFFMTTANAFAASTSKVFVSKLGIFIFLGFCALVLVVQLIPAMMT
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LYGMLKGLGKEQEKSPSRVKSH
HHHHHHHCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA