Definition Geobacter bemidjiensis Bem chromosome, complete genome.
Accession NC_011146
Length 4,615,150

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The map label for this gene is 197117044

Identifier: 197117044

GI number: 197117044

Start: 768397

End: 769224

Strand: Direct

Name: 197117044

Synonym: Gbem_0647

Alternate gene names: NA

Gene position: 768397-769224 (Clockwise)

Preceding gene: 197117043

Following gene: 197117045

Centisome position: 16.65

GC content: 63.16

Gene sequence:

>828_bases
ATGTCTCACCCGTATCTCCCCCGCGGGGTCGTTTTGGCCTTGCTCTTTCTCCTTTTGTCCTGGCAGCCGGCCGCCGCGGA
AACTATCAGGCTCAACGGTACGGGGTGCGGGGTGACCCTGATGAAGCCTTTGATCGCCTCCTTTCAGAAGAGCCACCCGG
AGATCACCTTTGACGTGCAGAAAAGCGTCGGTTCCGCCGCGTCGCTCAAGGCCATCGCCAAGGGTGCGCTTGACGTCGCC
GTTCCCGGCCGCGAGCTCAAGCCGCAGGAAAAGGTAGCGGGAGTCGCCTGGTACGAGTACGGCAGGACCCCCTACGCCGT
GGTCACCCACCGCGGCACCAAGCTCGACAACGTGACCACCGGGCAGCTTGCCGCCATGTACTTCGGGACCCATGGACAGT
GGGCGGACGGCGACTTCGTACGCGTGGTCCTGCGTCCCAAGGAAGACATCGACACGGCGGTGCTCCGTTCGCTTTCTCCG
GAGATGGACCGCGCGGTCACCGCGGCGCACGCGCGACCGGACATGCTGATGGGCATCACCGACCAGGAGACCTTCGACCA
CCTCAAGAAGACTGCAGGAACCATCTCCTTCATCCCCCTGATCATGCCCCTTTCCGAGCCCGGCACAGTCAACGTCGCGC
GCCTGAACGGCGTGGAGCCGACCCTGTCCAATCTCTCGACAGGGAAGTACGGCTACGCCAAAAAGATCTTCCTTGTGACC
AGGAAAAACCCCTCCCCCGGAGTAAAGGCGTTCGTGCAGTTCCTGGACTCCAAGAAGGCGCGGGCAATGGCGCAGAAGCA
CGGGTTGCTTCCGGCCGCAGGGAAGTGA

Upstream 100 bases:

>100_bases
ATGAAGGATGCGGCCGATGTTGTAAAGGTTGCCCCTCTCAAATCCGTTCCCGGGACCAGCCCTGTTTTTTTCACCGTCGG
ACAGCCGAAAGGAGCGCATC

Downstream 100 bases:

>100_bases
CACGGGGGGGTGAAGCCGCAACGTCTGGCAATGATGCCACCTTCCCCCACCCCCTAACCCCCTCCCGCAAGGGGAGGGGG
GCAAAGTGCGGCTTGCCACG

Product: family 1 extracellular solute-binding protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 275; Mature: 274

Protein sequence:

>275_residues
MSHPYLPRGVVLALLFLLLSWQPAAAETIRLNGTGCGVTLMKPLIASFQKSHPEITFDVQKSVGSAASLKAIAKGALDVA
VPGRELKPQEKVAGVAWYEYGRTPYAVVTHRGTKLDNVTTGQLAAMYFGTHGQWADGDFVRVVLRPKEDIDTAVLRSLSP
EMDRAVTAAHARPDMLMGITDQETFDHLKKTAGTISFIPLIMPLSEPGTVNVARLNGVEPTLSNLSTGKYGYAKKIFLVT
RKNPSPGVKAFVQFLDSKKARAMAQKHGLLPAAGK

Sequences:

>Translated_275_residues
MSHPYLPRGVVLALLFLLLSWQPAAAETIRLNGTGCGVTLMKPLIASFQKSHPEITFDVQKSVGSAASLKAIAKGALDVA
VPGRELKPQEKVAGVAWYEYGRTPYAVVTHRGTKLDNVTTGQLAAMYFGTHGQWADGDFVRVVLRPKEDIDTAVLRSLSP
EMDRAVTAAHARPDMLMGITDQETFDHLKKTAGTISFIPLIMPLSEPGTVNVARLNGVEPTLSNLSTGKYGYAKKIFLVT
RKNPSPGVKAFVQFLDSKKARAMAQKHGLLPAAGK
>Mature_274_residues
SHPYLPRGVVLALLFLLLSWQPAAAETIRLNGTGCGVTLMKPLIASFQKSHPEITFDVQKSVGSAASLKAIAKGALDVAV
PGRELKPQEKVAGVAWYEYGRTPYAVVTHRGTKLDNVTTGQLAAMYFGTHGQWADGDFVRVVLRPKEDIDTAVLRSLSPE
MDRAVTAAHARPDMLMGITDQETFDHLKKTAGTISFIPLIMPLSEPGTVNVARLNGVEPTLSNLSTGKYGYAKKIFLVTR
KNPSPGVKAFVQFLDSKKARAMAQKHGLLPAAGK

Specific function: Unknown

COG id: COG0226

COG function: function code P; ABC-type phosphate transport system, periplasmic component

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 29693; Mature: 29562

Theoretical pI: Translated: 10.29; Mature: 10.29

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSHPYLPRGVVLALLFLLLSWQPAAAETIRLNGTGCGVTLMKPLIASFQKSHPEITFDVQ
CCCCCCCHHHHHHHHHHHHCCCCCCCCEEEECCCCCCHHHHHHHHHHHHHCCCCEEEEEH
KSVGSAASLKAIAKGALDVAVPGRELKPQEKVAGVAWYEYGRTPYAVVTHRGTKLDNVTT
HCCCCHHHHHHHHHCCEEEECCCCCCCCHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCC
GQLAAMYFGTHGQWADGDFVRVVLRPKEDIDTAVLRSLSPEMDRAVTAAHARPDMLMGIT
CCEEEEEECCCCCCCCCCEEEEEECCCCHHHHHHHHHCCHHHHHHHHHHCCCCCEEEECC
DQETFDHLKKTAGTISFIPLIMPLSEPGTVNVARLNGVEPTLSNLSTGKYGYAKKIFLVT
CHHHHHHHHHHCCCEEEEEEEEECCCCCEEEEEEECCCCHHHHHCCCCCCCCEEEEEEEE
RKNPSPGVKAFVQFLDSKKARAMAQKHGLLPAAGK
CCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
>Mature Secondary Structure 
SHPYLPRGVVLALLFLLLSWQPAAAETIRLNGTGCGVTLMKPLIASFQKSHPEITFDVQ
CCCCCCHHHHHHHHHHHHCCCCCCCCEEEECCCCCCHHHHHHHHHHHHHCCCCEEEEEH
KSVGSAASLKAIAKGALDVAVPGRELKPQEKVAGVAWYEYGRTPYAVVTHRGTKLDNVTT
HCCCCHHHHHHHHHCCEEEECCCCCCCCHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCC
GQLAAMYFGTHGQWADGDFVRVVLRPKEDIDTAVLRSLSPEMDRAVTAAHARPDMLMGIT
CCEEEEEECCCCCCCCCCEEEEEECCCCHHHHHHHHHCCHHHHHHHHHHCCCCCEEEECC
DQETFDHLKKTAGTISFIPLIMPLSEPGTVNVARLNGVEPTLSNLSTGKYGYAKKIFLVT
CHHHHHHHHHHCCCEEEEEEEEECCCCCEEEEEEECCCCHHHHHCCCCCCCCEEEEEEEE
RKNPSPGVKAFVQFLDSKKARAMAQKHGLLPAAGK
CCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA