Definition Geobacter bemidjiensis Bem chromosome, complete genome.
Accession NC_011146
Length 4,615,150

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The map label for this gene is 197116980

Identifier: 197116980

GI number: 197116980

Start: 703609

End: 704004

Strand: Reverse

Name: 197116980

Synonym: Gbem_0583

Alternate gene names: NA

Gene position: 704004-703609 (Counterclockwise)

Preceding gene: 197116981

Following gene: 197116979

Centisome position: 15.25

GC content: 54.29

Gene sequence:

>396_bases
ATGCTCTTACTACAGATAACCTCGACAGTGACAGCGGTGACACTCGTGGTATTGGCACTGTGTCTGATACCTGTCCTCGC
GGAACTGAGGAAGGCTGCCGTCTTGATGCAGGAGGCCACGGACTCATTGCAGCAGGAACTGAAGCCGCTCATCAAGGATC
TGCGCGACACGGTCGCAGACATCCAGGTCGTGACCAGCTCAGCAGCAGCCAACGCCGACGGCGTCAACATGCTTTTGAGC
GAGCTAGGGCACGCCGGCCACAACATAAGGATGATCAACAAAGTATTAGGGATCGCCAGCAACGTAGCCAGTAACTATAC
GGTCTGGCTGACGGGCGCTAAGGTTGCGGGTCAATTTATTGCTGATAGACTAGTCAAAACAAAAACCAGGGGGTGA

Upstream 100 bases:

>100_bases
ATCGGGGAGGCCGCACCGGCGGCCTCCCCGACCCTTTTGCCCCCTTCCATAGAATCGAAATACACCGAGAAAACAGGTCC
AACAGTACCAGGAGGATTGC

Downstream 100 bases:

>100_bases
CTTCATGTCCAAAGATAATGATATCGGTACCGGTACTATGCTCCTCTCCTTCCTTGCCGGCGCCGCCGTGGGGATCGGGG
CGGCTTTGCTGCTTGCCCCC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 131; Mature: 131

Protein sequence:

>131_residues
MLLLQITSTVTAVTLVVLALCLIPVLAELRKAAVLMQEATDSLQQELKPLIKDLRDTVADIQVVTSSAAANADGVNMLLS
ELGHAGHNIRMINKVLGIASNVASNYTVWLTGAKVAGQFIADRLVKTKTRG

Sequences:

>Translated_131_residues
MLLLQITSTVTAVTLVVLALCLIPVLAELRKAAVLMQEATDSLQQELKPLIKDLRDTVADIQVVTSSAAANADGVNMLLS
ELGHAGHNIRMINKVLGIASNVASNYTVWLTGAKVAGQFIADRLVKTKTRG
>Mature_131_residues
MLLLQITSTVTAVTLVVLALCLIPVLAELRKAAVLMQEATDSLQQELKPLIKDLRDTVADIQVVTSSAAANADGVNMLLS
ELGHAGHNIRMINKVLGIASNVASNYTVWLTGAKVAGQFIADRLVKTKTRG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 13935; Mature: 13935

Theoretical pI: Translated: 9.27; Mature: 9.27

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLLLQITSTVTAVTLVVLALCLIPVLAELRKAAVLMQEATDSLQQELKPLIKDLRDTVAD
CEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IQVVTSSAAANADGVNMLLSELGHAGHNIRMINKVLGIASNVASNYTVWLTGAKVAGQFI
HHHHHHHHCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCEEEEECHHHHHHHH
ADRLVKTKTRG
HHHHHHHCCCC
>Mature Secondary Structure
MLLLQITSTVTAVTLVVLALCLIPVLAELRKAAVLMQEATDSLQQELKPLIKDLRDTVAD
CEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IQVVTSSAAANADGVNMLLSELGHAGHNIRMINKVLGIASNVASNYTVWLTGAKVAGQFI
HHHHHHHHCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCEEEEECHHHHHHHH
ADRLVKTKTRG
HHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA