| Definition | Geobacter bemidjiensis Bem chromosome, complete genome. |
|---|---|
| Accession | NC_011146 |
| Length | 4,615,150 |
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The map label for this gene is 197116952
Identifier: 197116952
GI number: 197116952
Start: 667345
End: 668775
Strand: Reverse
Name: 197116952
Synonym: Gbem_0554
Alternate gene names: NA
Gene position: 668775-667345 (Counterclockwise)
Preceding gene: 197116953
Following gene: 197116951
Centisome position: 14.49
GC content: 61.77
Gene sequence:
>1431_bases ATGAAAAGAACCCTGGCCCTCACCCTGATTCTCCTCAGTTCGCTGTTCTTCCCGCTCCTGGCCTCTGCCGAAAACATCCG CGCCTATGTCTCCGACTTCACCGTCTCCGGCGGCGACTCCGCCGACCTGAAGACCACCTTGAAGCGCCTCATGTCATCGC GGCTTTCCGGAGACGGGCTGGTCACCGTGGAGACGGCCGCCGAGGCGGACGTGGTCATCTCGGGTAGCTACACCATGCTG GGCAAGATGTTCAGCCTTGACGCCACCGCGAAAAACGCACAAGGAAAGCAGCTTGCCGCCGCCTACGAGCAGGGTGAAAG CATCGACGCCCTGATTCCCGCTGTCGGCAAGATTTCGAGCAAGCTCAAGGGCGAGATCGTGAAACAGTACCCGCAGGCAG CAGCCCCTGCTGCCGCCCCGCTCCAGTCTCCCGCGTTCGTGACCAAGGCGCCCGCCTCCGAGATCGTCCGCAGCGAAGCC GGCGCCGGCTGGGCCAGCCAGCGCATCGCCGGAGCCAAGAGCGCGATCGCCTCATGGGGCACCGAGGAAATGATCATCGC CGATGCGGACGCCCTCTACCTCTACAAAAAAGGCGACAAACTCGCCCTGCTCGGGCAAGCCGCGCTGCCCCAGCACCAAA AGCTGCTCGGTATCGACGCCATCGGCCCGGACCAAGAGGGCAAGGTGCTCGCCTTCGTGACCCTGATGGACCGCGAGGCG CCTTCATCACGCGTCTACTCCATCCAAAACGGCACACTGAAGGCGGTGGCGCAGGACCTCCCGTATATGTTCCGCGCGCT GGCGCCTTACGGCGGCAAGAAACAGCTCTTCGCCCAGGAGATGGGGCGCAGCGACGATTACTACGGCGACGTTTTCGAGG CGTCCTTCGTCGACGGAAAGGTGAAGCTTGCCAACCCGATCAAGATGCCGCGCTTCGCCAACATCTTCAACTTCAACCTG TTCCGCGACCGGTCCGGGAAATCCTTCCTCACCTGCTTCAACGACAGCGGCTACCTGCTGGTATATGCGGACGGCGACGA GATCTGGAGAAGCAGCGAGAAGTTCGGCGGCACCGAGACCTACTTCCAGCGCCGCGACATCGAGAACGAAAGGACCACTG GAACACCTTTCCGCACCAGGTTCATCGATCAGCGCATCACCGTAACCGACAAGGGCGAGGTGATTGTCCCCCAAAACGCA GGCTTCTTCGTGCTGGGCAACGCCCGTTCCTACTCCAGGTACTCCATGGTGGATTTTGCCTGGAACGGGTCGACGCTTGA GGAACTCTGGAGGACCAAGCCGAGCCAGAATTACCTGGCCGACTACGACTTCAACCAGAAAAGCCGCGAAATGGTGCTCA TGGAGGTGACCCAGAAGACCGGCCTGGGCGGCAAAGGCGGCAGTCTGGTCAGGATTCTCCGGGCGGAATAG
Upstream 100 bases:
>100_bases TTGGGTCAAGCCCTGTCTCTGGCGTGAAACCGTTTGACTAAAGCCTGCCGCTCTGCGATAATTCCGCGTCTTTTAATTCC AAGGAATAAGCGGAGTAATC
Downstream 100 bases:
>100_bases ACTATATGGCAGGGGGAATTAATCGTTGACTTCCCCCTGCCATACTGTTACGATTTCTCGTTTTTTCGCCAGCTTCAGCG GTACCGACATACCTTAGGAC
Product: hypothetical protein
Products: NA
Alternate protein names: FG-GAP Repeat Protein
Number of amino acids: Translated: 476; Mature: 476
Protein sequence:
>476_residues MKRTLALTLILLSSLFFPLLASAENIRAYVSDFTVSGGDSADLKTTLKRLMSSRLSGDGLVTVETAAEADVVISGSYTML GKMFSLDATAKNAQGKQLAAAYEQGESIDALIPAVGKISSKLKGEIVKQYPQAAAPAAAPLQSPAFVTKAPASEIVRSEA GAGWASQRIAGAKSAIASWGTEEMIIADADALYLYKKGDKLALLGQAALPQHQKLLGIDAIGPDQEGKVLAFVTLMDREA PSSRVYSIQNGTLKAVAQDLPYMFRALAPYGGKKQLFAQEMGRSDDYYGDVFEASFVDGKVKLANPIKMPRFANIFNFNL FRDRSGKSFLTCFNDSGYLLVYADGDEIWRSSEKFGGTETYFQRRDIENERTTGTPFRTRFIDQRITVTDKGEVIVPQNA GFFVLGNARSYSRYSMVDFAWNGSTLEELWRTKPSQNYLADYDFNQKSREMVLMEVTQKTGLGGKGGSLVRILRAE
Sequences:
>Translated_476_residues MKRTLALTLILLSSLFFPLLASAENIRAYVSDFTVSGGDSADLKTTLKRLMSSRLSGDGLVTVETAAEADVVISGSYTML GKMFSLDATAKNAQGKQLAAAYEQGESIDALIPAVGKISSKLKGEIVKQYPQAAAPAAAPLQSPAFVTKAPASEIVRSEA GAGWASQRIAGAKSAIASWGTEEMIIADADALYLYKKGDKLALLGQAALPQHQKLLGIDAIGPDQEGKVLAFVTLMDREA PSSRVYSIQNGTLKAVAQDLPYMFRALAPYGGKKQLFAQEMGRSDDYYGDVFEASFVDGKVKLANPIKMPRFANIFNFNL FRDRSGKSFLTCFNDSGYLLVYADGDEIWRSSEKFGGTETYFQRRDIENERTTGTPFRTRFIDQRITVTDKGEVIVPQNA GFFVLGNARSYSRYSMVDFAWNGSTLEELWRTKPSQNYLADYDFNQKSREMVLMEVTQKTGLGGKGGSLVRILRAE >Mature_476_residues MKRTLALTLILLSSLFFPLLASAENIRAYVSDFTVSGGDSADLKTTLKRLMSSRLSGDGLVTVETAAEADVVISGSYTML GKMFSLDATAKNAQGKQLAAAYEQGESIDALIPAVGKISSKLKGEIVKQYPQAAAPAAAPLQSPAFVTKAPASEIVRSEA GAGWASQRIAGAKSAIASWGTEEMIIADADALYLYKKGDKLALLGQAALPQHQKLLGIDAIGPDQEGKVLAFVTLMDREA PSSRVYSIQNGTLKAVAQDLPYMFRALAPYGGKKQLFAQEMGRSDDYYGDVFEASFVDGKVKLANPIKMPRFANIFNFNL FRDRSGKSFLTCFNDSGYLLVYADGDEIWRSSEKFGGTETYFQRRDIENERTTGTPFRTRFIDQRITVTDKGEVIVPQNA GFFVLGNARSYSRYSMVDFAWNGSTLEELWRTKPSQNYLADYDFNQKSREMVLMEVTQKTGLGGKGGSLVRILRAE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 52044; Mature: 52044
Theoretical pI: Translated: 8.94; Mature: 8.94
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKRTLALTLILLSSLFFPLLASAENIRAYVSDFTVSGGDSADLKTTLKRLMSSRLSGDGL CCHHHHHHHHHHHHHHHHHHHCHHHHHHEEHHEEECCCCCCHHHHHHHHHHHHHCCCCCE VTVETAAEADVVISGSYTMLGKMFSLDATAKNAQGKQLAAAYEQGESIDALIPAVGKISS EEEEECCCCCEEEECCHHHHHHHHCCCCCCCCCCCHHHHHHHHCCCCHHHHHHHHHHHHH KLKGEIVKQYPQAAAPAAAPLQSPAFVTKAPASEIVRSEAGAGWASQRIAGAKSAIASWG HHHHHHHHHCCHHCCCCCCCCCCCCEEECCCHHHHHHHHCCCCHHHHHHHHHHHHHHHCC TEEMIIADADALYLYKKGDKLALLGQAALPQHQKLLGIDAIGPDQEGKVLAFVTLMDREA CCEEEEECCCEEEEEECCCEEEEEECCCCCCCHHEEEECCCCCCCCCCEEEEEEEECCCC PSSRVYSIQNGTLKAVAQDLPYMFRALAPYGGKKQLFAQEMGRSDDYYGDVFEASFVDGK CCCEEEEECCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCCCCCCCEEEEECCCE VKLANPIKMPRFANIFNFNLFRDRSGKSFLTCFNDSGYLLVYADGDEIWRSSEKFGGTET EEECCCCCCCCCCCEEEEEEEECCCCCEEEEEECCCCEEEEEECCHHHHHCHHHCCCHHH YFQRRDIENERTTGTPFRTRFIDQRITVTDKGEVIVPQNAGFFVLGNARSYSRYSMVDFA HHHHHCCCCCCCCCCCHHHHHHCCEEEEECCCCEEEECCCCEEEEECCCCCCEEEEEEEE WNGSTLEELWRTKPSQNYLADYDFNQKSREMVLMEVTQKTGLGGKGGSLVRILRAE ECCCHHHHHHCCCCCCCCEECCCCCCCCHHEEEEEEHHHCCCCCCCCCEEEEEECC >Mature Secondary Structure MKRTLALTLILLSSLFFPLLASAENIRAYVSDFTVSGGDSADLKTTLKRLMSSRLSGDGL CCHHHHHHHHHHHHHHHHHHHCHHHHHHEEHHEEECCCCCCHHHHHHHHHHHHHCCCCCE VTVETAAEADVVISGSYTMLGKMFSLDATAKNAQGKQLAAAYEQGESIDALIPAVGKISS EEEEECCCCCEEEECCHHHHHHHHCCCCCCCCCCCHHHHHHHHCCCCHHHHHHHHHHHHH KLKGEIVKQYPQAAAPAAAPLQSPAFVTKAPASEIVRSEAGAGWASQRIAGAKSAIASWG HHHHHHHHHCCHHCCCCCCCCCCCCEEECCCHHHHHHHHCCCCHHHHHHHHHHHHHHHCC TEEMIIADADALYLYKKGDKLALLGQAALPQHQKLLGIDAIGPDQEGKVLAFVTLMDREA CCEEEEECCCEEEEEECCCEEEEEECCCCCCCHHEEEECCCCCCCCCCEEEEEEEECCCC PSSRVYSIQNGTLKAVAQDLPYMFRALAPYGGKKQLFAQEMGRSDDYYGDVFEASFVDGK CCCEEEEECCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCCCCCCCEEEEECCCE VKLANPIKMPRFANIFNFNLFRDRSGKSFLTCFNDSGYLLVYADGDEIWRSSEKFGGTET EEECCCCCCCCCCCEEEEEEEECCCCCEEEEEECCCCEEEEEECCHHHHHCHHHCCCHHH YFQRRDIENERTTGTPFRTRFIDQRITVTDKGEVIVPQNAGFFVLGNARSYSRYSMVDFA HHHHHCCCCCCCCCCCHHHHHHCCEEEEECCCCEEEECCCCEEEEECCCCCCEEEEEEEE WNGSTLEELWRTKPSQNYLADYDFNQKSREMVLMEVTQKTGLGGKGGSLVRILRAE ECCCHHHHHHCCCCCCCCEECCCCCCCCHHEEEEEEHHHCCCCCCCCCEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA