Definition Geobacter bemidjiensis Bem chromosome, complete genome.
Accession NC_011146
Length 4,615,150

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The map label for this gene is 197116952

Identifier: 197116952

GI number: 197116952

Start: 667345

End: 668775

Strand: Reverse

Name: 197116952

Synonym: Gbem_0554

Alternate gene names: NA

Gene position: 668775-667345 (Counterclockwise)

Preceding gene: 197116953

Following gene: 197116951

Centisome position: 14.49

GC content: 61.77

Gene sequence:

>1431_bases
ATGAAAAGAACCCTGGCCCTCACCCTGATTCTCCTCAGTTCGCTGTTCTTCCCGCTCCTGGCCTCTGCCGAAAACATCCG
CGCCTATGTCTCCGACTTCACCGTCTCCGGCGGCGACTCCGCCGACCTGAAGACCACCTTGAAGCGCCTCATGTCATCGC
GGCTTTCCGGAGACGGGCTGGTCACCGTGGAGACGGCCGCCGAGGCGGACGTGGTCATCTCGGGTAGCTACACCATGCTG
GGCAAGATGTTCAGCCTTGACGCCACCGCGAAAAACGCACAAGGAAAGCAGCTTGCCGCCGCCTACGAGCAGGGTGAAAG
CATCGACGCCCTGATTCCCGCTGTCGGCAAGATTTCGAGCAAGCTCAAGGGCGAGATCGTGAAACAGTACCCGCAGGCAG
CAGCCCCTGCTGCCGCCCCGCTCCAGTCTCCCGCGTTCGTGACCAAGGCGCCCGCCTCCGAGATCGTCCGCAGCGAAGCC
GGCGCCGGCTGGGCCAGCCAGCGCATCGCCGGAGCCAAGAGCGCGATCGCCTCATGGGGCACCGAGGAAATGATCATCGC
CGATGCGGACGCCCTCTACCTCTACAAAAAAGGCGACAAACTCGCCCTGCTCGGGCAAGCCGCGCTGCCCCAGCACCAAA
AGCTGCTCGGTATCGACGCCATCGGCCCGGACCAAGAGGGCAAGGTGCTCGCCTTCGTGACCCTGATGGACCGCGAGGCG
CCTTCATCACGCGTCTACTCCATCCAAAACGGCACACTGAAGGCGGTGGCGCAGGACCTCCCGTATATGTTCCGCGCGCT
GGCGCCTTACGGCGGCAAGAAACAGCTCTTCGCCCAGGAGATGGGGCGCAGCGACGATTACTACGGCGACGTTTTCGAGG
CGTCCTTCGTCGACGGAAAGGTGAAGCTTGCCAACCCGATCAAGATGCCGCGCTTCGCCAACATCTTCAACTTCAACCTG
TTCCGCGACCGGTCCGGGAAATCCTTCCTCACCTGCTTCAACGACAGCGGCTACCTGCTGGTATATGCGGACGGCGACGA
GATCTGGAGAAGCAGCGAGAAGTTCGGCGGCACCGAGACCTACTTCCAGCGCCGCGACATCGAGAACGAAAGGACCACTG
GAACACCTTTCCGCACCAGGTTCATCGATCAGCGCATCACCGTAACCGACAAGGGCGAGGTGATTGTCCCCCAAAACGCA
GGCTTCTTCGTGCTGGGCAACGCCCGTTCCTACTCCAGGTACTCCATGGTGGATTTTGCCTGGAACGGGTCGACGCTTGA
GGAACTCTGGAGGACCAAGCCGAGCCAGAATTACCTGGCCGACTACGACTTCAACCAGAAAAGCCGCGAAATGGTGCTCA
TGGAGGTGACCCAGAAGACCGGCCTGGGCGGCAAAGGCGGCAGTCTGGTCAGGATTCTCCGGGCGGAATAG

Upstream 100 bases:

>100_bases
TTGGGTCAAGCCCTGTCTCTGGCGTGAAACCGTTTGACTAAAGCCTGCCGCTCTGCGATAATTCCGCGTCTTTTAATTCC
AAGGAATAAGCGGAGTAATC

Downstream 100 bases:

>100_bases
ACTATATGGCAGGGGGAATTAATCGTTGACTTCCCCCTGCCATACTGTTACGATTTCTCGTTTTTTCGCCAGCTTCAGCG
GTACCGACATACCTTAGGAC

Product: hypothetical protein

Products: NA

Alternate protein names: FG-GAP Repeat Protein

Number of amino acids: Translated: 476; Mature: 476

Protein sequence:

>476_residues
MKRTLALTLILLSSLFFPLLASAENIRAYVSDFTVSGGDSADLKTTLKRLMSSRLSGDGLVTVETAAEADVVISGSYTML
GKMFSLDATAKNAQGKQLAAAYEQGESIDALIPAVGKISSKLKGEIVKQYPQAAAPAAAPLQSPAFVTKAPASEIVRSEA
GAGWASQRIAGAKSAIASWGTEEMIIADADALYLYKKGDKLALLGQAALPQHQKLLGIDAIGPDQEGKVLAFVTLMDREA
PSSRVYSIQNGTLKAVAQDLPYMFRALAPYGGKKQLFAQEMGRSDDYYGDVFEASFVDGKVKLANPIKMPRFANIFNFNL
FRDRSGKSFLTCFNDSGYLLVYADGDEIWRSSEKFGGTETYFQRRDIENERTTGTPFRTRFIDQRITVTDKGEVIVPQNA
GFFVLGNARSYSRYSMVDFAWNGSTLEELWRTKPSQNYLADYDFNQKSREMVLMEVTQKTGLGGKGGSLVRILRAE

Sequences:

>Translated_476_residues
MKRTLALTLILLSSLFFPLLASAENIRAYVSDFTVSGGDSADLKTTLKRLMSSRLSGDGLVTVETAAEADVVISGSYTML
GKMFSLDATAKNAQGKQLAAAYEQGESIDALIPAVGKISSKLKGEIVKQYPQAAAPAAAPLQSPAFVTKAPASEIVRSEA
GAGWASQRIAGAKSAIASWGTEEMIIADADALYLYKKGDKLALLGQAALPQHQKLLGIDAIGPDQEGKVLAFVTLMDREA
PSSRVYSIQNGTLKAVAQDLPYMFRALAPYGGKKQLFAQEMGRSDDYYGDVFEASFVDGKVKLANPIKMPRFANIFNFNL
FRDRSGKSFLTCFNDSGYLLVYADGDEIWRSSEKFGGTETYFQRRDIENERTTGTPFRTRFIDQRITVTDKGEVIVPQNA
GFFVLGNARSYSRYSMVDFAWNGSTLEELWRTKPSQNYLADYDFNQKSREMVLMEVTQKTGLGGKGGSLVRILRAE
>Mature_476_residues
MKRTLALTLILLSSLFFPLLASAENIRAYVSDFTVSGGDSADLKTTLKRLMSSRLSGDGLVTVETAAEADVVISGSYTML
GKMFSLDATAKNAQGKQLAAAYEQGESIDALIPAVGKISSKLKGEIVKQYPQAAAPAAAPLQSPAFVTKAPASEIVRSEA
GAGWASQRIAGAKSAIASWGTEEMIIADADALYLYKKGDKLALLGQAALPQHQKLLGIDAIGPDQEGKVLAFVTLMDREA
PSSRVYSIQNGTLKAVAQDLPYMFRALAPYGGKKQLFAQEMGRSDDYYGDVFEASFVDGKVKLANPIKMPRFANIFNFNL
FRDRSGKSFLTCFNDSGYLLVYADGDEIWRSSEKFGGTETYFQRRDIENERTTGTPFRTRFIDQRITVTDKGEVIVPQNA
GFFVLGNARSYSRYSMVDFAWNGSTLEELWRTKPSQNYLADYDFNQKSREMVLMEVTQKTGLGGKGGSLVRILRAE

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 52044; Mature: 52044

Theoretical pI: Translated: 8.94; Mature: 8.94

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKRTLALTLILLSSLFFPLLASAENIRAYVSDFTVSGGDSADLKTTLKRLMSSRLSGDGL
CCHHHHHHHHHHHHHHHHHHHCHHHHHHEEHHEEECCCCCCHHHHHHHHHHHHHCCCCCE
VTVETAAEADVVISGSYTMLGKMFSLDATAKNAQGKQLAAAYEQGESIDALIPAVGKISS
EEEEECCCCCEEEECCHHHHHHHHCCCCCCCCCCCHHHHHHHHCCCCHHHHHHHHHHHHH
KLKGEIVKQYPQAAAPAAAPLQSPAFVTKAPASEIVRSEAGAGWASQRIAGAKSAIASWG
HHHHHHHHHCCHHCCCCCCCCCCCCEEECCCHHHHHHHHCCCCHHHHHHHHHHHHHHHCC
TEEMIIADADALYLYKKGDKLALLGQAALPQHQKLLGIDAIGPDQEGKVLAFVTLMDREA
CCEEEEECCCEEEEEECCCEEEEEECCCCCCCHHEEEECCCCCCCCCCEEEEEEEECCCC
PSSRVYSIQNGTLKAVAQDLPYMFRALAPYGGKKQLFAQEMGRSDDYYGDVFEASFVDGK
CCCEEEEECCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCCCCCCCEEEEECCCE
VKLANPIKMPRFANIFNFNLFRDRSGKSFLTCFNDSGYLLVYADGDEIWRSSEKFGGTET
EEECCCCCCCCCCCEEEEEEEECCCCCEEEEEECCCCEEEEEECCHHHHHCHHHCCCHHH
YFQRRDIENERTTGTPFRTRFIDQRITVTDKGEVIVPQNAGFFVLGNARSYSRYSMVDFA
HHHHHCCCCCCCCCCCHHHHHHCCEEEEECCCCEEEECCCCEEEEECCCCCCEEEEEEEE
WNGSTLEELWRTKPSQNYLADYDFNQKSREMVLMEVTQKTGLGGKGGSLVRILRAE
ECCCHHHHHHCCCCCCCCEECCCCCCCCHHEEEEEEHHHCCCCCCCCCEEEEEECC
>Mature Secondary Structure
MKRTLALTLILLSSLFFPLLASAENIRAYVSDFTVSGGDSADLKTTLKRLMSSRLSGDGL
CCHHHHHHHHHHHHHHHHHHHCHHHHHHEEHHEEECCCCCCHHHHHHHHHHHHHCCCCCE
VTVETAAEADVVISGSYTMLGKMFSLDATAKNAQGKQLAAAYEQGESIDALIPAVGKISS
EEEEECCCCCEEEECCHHHHHHHHCCCCCCCCCCCHHHHHHHHCCCCHHHHHHHHHHHHH
KLKGEIVKQYPQAAAPAAAPLQSPAFVTKAPASEIVRSEAGAGWASQRIAGAKSAIASWG
HHHHHHHHHCCHHCCCCCCCCCCCCEEECCCHHHHHHHHCCCCHHHHHHHHHHHHHHHCC
TEEMIIADADALYLYKKGDKLALLGQAALPQHQKLLGIDAIGPDQEGKVLAFVTLMDREA
CCEEEEECCCEEEEEECCCEEEEEECCCCCCCHHEEEECCCCCCCCCCEEEEEEEECCCC
PSSRVYSIQNGTLKAVAQDLPYMFRALAPYGGKKQLFAQEMGRSDDYYGDVFEASFVDGK
CCCEEEEECCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCCCCCCCEEEEECCCE
VKLANPIKMPRFANIFNFNLFRDRSGKSFLTCFNDSGYLLVYADGDEIWRSSEKFGGTET
EEECCCCCCCCCCCEEEEEEEECCCCCEEEEEECCCCEEEEEECCHHHHHCHHHCCCHHH
YFQRRDIENERTTGTPFRTRFIDQRITVTDKGEVIVPQNAGFFVLGNARSYSRYSMVDFA
HHHHHCCCCCCCCCCCHHHHHHCCEEEEECCCCEEEECCCCEEEEECCCCCCEEEEEEEE
WNGSTLEELWRTKPSQNYLADYDFNQKSREMVLMEVTQKTGLGGKGGSLVRILRAE
ECCCHHHHHHCCCCCCCCEECCCCCCCCHHEEEEEEHHHCCCCCCCCCEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA