Definition Geobacter bemidjiensis Bem chromosome, complete genome.
Accession NC_011146
Length 4,615,150

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The map label for this gene is 197116942

Identifier: 197116942

GI number: 197116942

Start: 657341

End: 657997

Strand: Reverse

Name: 197116942

Synonym: Gbem_0544

Alternate gene names: NA

Gene position: 657997-657341 (Counterclockwise)

Preceding gene: 197116943

Following gene: 197116941

Centisome position: 14.26

GC content: 62.25

Gene sequence:

>657_bases
ATGCGGAAGGACCTGCACGATTTCTGGCATTTCTCCCGGCGCTACCGGCAGTTTCAAAGGATCTCCGCCCTGACGCAGGG
AATACTGGACAAGGACCATGAGGTCTCCGAGCCGACCAGGGGAGCCCTGCAAAAGCTGAACGGCAACCGCATCAAATGCC
AGGAGCGGATCGCTGGGCTCGACCTCCCTTCCTTCGCCGGCTGCCGCAGCTGCCAGGGGGCCTGCTGTGGCGAGCCGGCC
GAACACTACTTCACTGCCATCGATTTCTGGTTGAGGAAGTACAGCCATAAGCAGGTGACCGCCTTTTCTGAGCAGCCACT
CCAGCCGTTACCCGCCTATTACCGGCTCCGCATCGAGTCCGCGCTGGGTCTGGGAAAGCCCAGGACAACTGCACAAGGGA
GCCACTTGAGGCAGGACAGCAGATGCGCCCACCTGGGTGAGCGCGGCTGCCTGCTGCCGCACGCCGAGCGCCCGCTGCAA
TGCCTGATCTACGCCTGCCCAAGCCTCAAACAGTCGCTGGACCAAGCGACGCGGCTGGCATACCTCGAGTCGGTCCGGGA
GTTACTGGGGATTTCCCTGGCCACCTTCAATGCCCTGAAGTGCGAGGCGGGGTTTCCTCCCTATTACGGGCTGACCTCGC
TTTTACTCACCGTGTGA

Upstream 100 bases:

>100_bases
ATTCGTCGCACCTGGCCGCCTGGGCGATGATCTACGCGCTTTCGGGGATGGCGCAGCGCAAGCGCGACCGGCCGGGACCG
GACCGGTAAAGGATGCGGCC

Downstream 100 bases:

>100_bases
TTCCAGATCCCGGCCGAACCGGCCGTACGAGGCCCGCCCATGGAAGCGATCTTCAACGAGGAGCAGAGGAACTTCAAGCA
GATGGCGATCGAGTTCGCCC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 218; Mature: 218

Protein sequence:

>218_residues
MRKDLHDFWHFSRRYRQFQRISALTQGILDKDHEVSEPTRGALQKLNGNRIKCQERIAGLDLPSFAGCRSCQGACCGEPA
EHYFTAIDFWLRKYSHKQVTAFSEQPLQPLPAYYRLRIESALGLGKPRTTAQGSHLRQDSRCAHLGERGCLLPHAERPLQ
CLIYACPSLKQSLDQATRLAYLESVRELLGISLATFNALKCEAGFPPYYGLTSLLLTV

Sequences:

>Translated_218_residues
MRKDLHDFWHFSRRYRQFQRISALTQGILDKDHEVSEPTRGALQKLNGNRIKCQERIAGLDLPSFAGCRSCQGACCGEPA
EHYFTAIDFWLRKYSHKQVTAFSEQPLQPLPAYYRLRIESALGLGKPRTTAQGSHLRQDSRCAHLGERGCLLPHAERPLQ
CLIYACPSLKQSLDQATRLAYLESVRELLGISLATFNALKCEAGFPPYYGLTSLLLTV
>Mature_218_residues
MRKDLHDFWHFSRRYRQFQRISALTQGILDKDHEVSEPTRGALQKLNGNRIKCQERIAGLDLPSFAGCRSCQGACCGEPA
EHYFTAIDFWLRKYSHKQVTAFSEQPLQPLPAYYRLRIESALGLGKPRTTAQGSHLRQDSRCAHLGERGCLLPHAERPLQ
CLIYACPSLKQSLDQATRLAYLESVRELLGISLATFNALKCEAGFPPYYGLTSLLLTV

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 24670; Mature: 24670

Theoretical pI: Translated: 8.83; Mature: 8.83

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

4.6 %Cys     (Translated Protein)
0.5 %Met     (Translated Protein)
5.0 %Cys+Met (Translated Protein)
4.6 %Cys     (Mature Protein)
0.5 %Met     (Mature Protein)
5.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRKDLHDFWHFSRRYRQFQRISALTQGILDKDHEVSEPTRGALQKLNGNRIKCQERIAGL
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHCCCCEEEHHHHHHCC
DLPSFAGCRSCQGACCGEPAEHYFTAIDFWLRKYSHKQVTAFSEQPLQPLPAYYRLRIES
CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHCCCCCCCCCHHHHHHHHH
ALGLGKPRTTAQGSHLRQDSRCAHLGERGCLLPHAERPLQCLIYACPSLKQSLDQATRLA
HHCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHCHHHHHHHHHHHHHH
YLESVRELLGISLATFNALKCEAGFPPYYGLTSLLLTV
HHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCC
>Mature Secondary Structure
MRKDLHDFWHFSRRYRQFQRISALTQGILDKDHEVSEPTRGALQKLNGNRIKCQERIAGL
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHCCCCEEEHHHHHHCC
DLPSFAGCRSCQGACCGEPAEHYFTAIDFWLRKYSHKQVTAFSEQPLQPLPAYYRLRIES
CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHCCCCCCCCCHHHHHHHHH
ALGLGKPRTTAQGSHLRQDSRCAHLGERGCLLPHAERPLQCLIYACPSLKQSLDQATRLA
HHCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHCHHHHHHHHHHHHHH
YLESVRELLGISLATFNALKCEAGFPPYYGLTSLLLTV
HHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA