| Definition | Geobacter bemidjiensis Bem chromosome, complete genome. |
|---|---|
| Accession | NC_011146 |
| Length | 4,615,150 |
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The map label for this gene is 197116924
Identifier: 197116924
GI number: 197116924
Start: 637608
End: 638072
Strand: Reverse
Name: 197116924
Synonym: Gbem_0526
Alternate gene names: NA
Gene position: 638072-637608 (Counterclockwise)
Preceding gene: 197116925
Following gene: 197116923
Centisome position: 13.83
GC content: 57.85
Gene sequence:
>465_bases ATGTTCAATAAGATCCTCGCCACACGCGACGACATCAACCTGACCATCGTCAGAGTATTCCTGGGCTTAGTGTTCTTCCC CCACGGTGCGCAGAAAATGCTGGGCTGGTTTGGCGGTCCAGGCTTCTCCGGCACCATGCAGATGTTTACCCAGAACATGA AGGTCCCGATGGTCTTCGCCTTCCTGGCCATCTGCGCCGAATTCCTAGGCTCTTTGGGACTGCTCGTTGGCCTTTGCACC AGGATCGCCGCCTTCGGCATCCTGAGCAACATGGCCGTAGCCATCTTCATGGTTCACCTCCCCAACGGCTTTTTCATGAA CTGGACCGGCAAGCAGTCTGGAGAAGGGTTCGAGTACCACCTGCTGGTCCTGGGCATGGCATTGGCTCTCATCGTCGGCG GCGGAGGGAAGGCATCGCTCGACCGGAAGATAGCCGTTGACCCGACATGGAGGACGCCGCATTGA
Upstream 100 bases:
>100_bases AGCAGGAGTATGAGATCCGCAAAAATCAGATTGAGAAAGGCTCCCTTTTTCAGAAGTAATTGACAGGCAGAGGTACGGAA GACAGCAAACGGAGATCGCC
Downstream 100 bases:
>100_bases TCCTTCAAGTGCCGACTGGCAGGAGAAATTTTCTGAAACTCAATGAGGCCCGTTCCGATCAACCGGAGCGGGCTTTATTT TTGACACAGCGCCAGCCCCA
Product: DoxX family protein
Products: NA
Alternate protein names: Membrane DoxD-Like Family Protein; DoxD-Like Family Protein; DoxX-Like; DoxX Subfamily; Doxx Family Protein; Integral Membrane Protein
Number of amino acids: Translated: 154; Mature: 154
Protein sequence:
>154_residues MFNKILATRDDINLTIVRVFLGLVFFPHGAQKMLGWFGGPGFSGTMQMFTQNMKVPMVFAFLAICAEFLGSLGLLVGLCT RIAAFGILSNMAVAIFMVHLPNGFFMNWTGKQSGEGFEYHLLVLGMALALIVGGGGKASLDRKIAVDPTWRTPH
Sequences:
>Translated_154_residues MFNKILATRDDINLTIVRVFLGLVFFPHGAQKMLGWFGGPGFSGTMQMFTQNMKVPMVFAFLAICAEFLGSLGLLVGLCT RIAAFGILSNMAVAIFMVHLPNGFFMNWTGKQSGEGFEYHLLVLGMALALIVGGGGKASLDRKIAVDPTWRTPH >Mature_154_residues MFNKILATRDDINLTIVRVFLGLVFFPHGAQKMLGWFGGPGFSGTMQMFTQNMKVPMVFAFLAICAEFLGSLGLLVGLCT RIAAFGILSNMAVAIFMVHLPNGFFMNWTGKQSGEGFEYHLLVLGMALALIVGGGGKASLDRKIAVDPTWRTPH
Specific function: Unknown
COG id: COG2259
COG function: function code S; Predicted membrane protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16760; Mature: 16760
Theoretical pI: Translated: 9.92; Mature: 9.92
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 6.5 %Met (Translated Protein) 7.8 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 6.5 %Met (Mature Protein) 7.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFNKILATRDDINLTIVRVFLGLVFFPHGAQKMLGWFGGPGFSGTMQMFTQNMKVPMVFA CCCCCCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCHHHHHHHCCCCHHHHHH FLAICAEFLGSLGLLVGLCTRIAAFGILSNMAVAIFMVHLPNGFFMNWTGKQSGEGFEYH HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCEEEECCCCCCCCCCHHH LLVLGMALALIVGGGGKASLDRKIAVDPTWRTPH HHHHHHHHHHHHCCCCCCCCCCEEECCCCCCCCC >Mature Secondary Structure MFNKILATRDDINLTIVRVFLGLVFFPHGAQKMLGWFGGPGFSGTMQMFTQNMKVPMVFA CCCCCCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCHHHHHHHCCCCHHHHHH FLAICAEFLGSLGLLVGLCTRIAAFGILSNMAVAIFMVHLPNGFFMNWTGKQSGEGFEYH HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCEEEECCCCCCCCCCHHH LLVLGMALALIVGGGGKASLDRKIAVDPTWRTPH HHHHHHHHHHHHCCCCCCCCCCEEECCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA