Definition Geobacter bemidjiensis Bem chromosome, complete genome.
Accession NC_011146
Length 4,615,150

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The map label for this gene is 197116924

Identifier: 197116924

GI number: 197116924

Start: 637608

End: 638072

Strand: Reverse

Name: 197116924

Synonym: Gbem_0526

Alternate gene names: NA

Gene position: 638072-637608 (Counterclockwise)

Preceding gene: 197116925

Following gene: 197116923

Centisome position: 13.83

GC content: 57.85

Gene sequence:

>465_bases
ATGTTCAATAAGATCCTCGCCACACGCGACGACATCAACCTGACCATCGTCAGAGTATTCCTGGGCTTAGTGTTCTTCCC
CCACGGTGCGCAGAAAATGCTGGGCTGGTTTGGCGGTCCAGGCTTCTCCGGCACCATGCAGATGTTTACCCAGAACATGA
AGGTCCCGATGGTCTTCGCCTTCCTGGCCATCTGCGCCGAATTCCTAGGCTCTTTGGGACTGCTCGTTGGCCTTTGCACC
AGGATCGCCGCCTTCGGCATCCTGAGCAACATGGCCGTAGCCATCTTCATGGTTCACCTCCCCAACGGCTTTTTCATGAA
CTGGACCGGCAAGCAGTCTGGAGAAGGGTTCGAGTACCACCTGCTGGTCCTGGGCATGGCATTGGCTCTCATCGTCGGCG
GCGGAGGGAAGGCATCGCTCGACCGGAAGATAGCCGTTGACCCGACATGGAGGACGCCGCATTGA

Upstream 100 bases:

>100_bases
AGCAGGAGTATGAGATCCGCAAAAATCAGATTGAGAAAGGCTCCCTTTTTCAGAAGTAATTGACAGGCAGAGGTACGGAA
GACAGCAAACGGAGATCGCC

Downstream 100 bases:

>100_bases
TCCTTCAAGTGCCGACTGGCAGGAGAAATTTTCTGAAACTCAATGAGGCCCGTTCCGATCAACCGGAGCGGGCTTTATTT
TTGACACAGCGCCAGCCCCA

Product: DoxX family protein

Products: NA

Alternate protein names: Membrane DoxD-Like Family Protein; DoxD-Like Family Protein; DoxX-Like; DoxX Subfamily; Doxx Family Protein; Integral Membrane Protein

Number of amino acids: Translated: 154; Mature: 154

Protein sequence:

>154_residues
MFNKILATRDDINLTIVRVFLGLVFFPHGAQKMLGWFGGPGFSGTMQMFTQNMKVPMVFAFLAICAEFLGSLGLLVGLCT
RIAAFGILSNMAVAIFMVHLPNGFFMNWTGKQSGEGFEYHLLVLGMALALIVGGGGKASLDRKIAVDPTWRTPH

Sequences:

>Translated_154_residues
MFNKILATRDDINLTIVRVFLGLVFFPHGAQKMLGWFGGPGFSGTMQMFTQNMKVPMVFAFLAICAEFLGSLGLLVGLCT
RIAAFGILSNMAVAIFMVHLPNGFFMNWTGKQSGEGFEYHLLVLGMALALIVGGGGKASLDRKIAVDPTWRTPH
>Mature_154_residues
MFNKILATRDDINLTIVRVFLGLVFFPHGAQKMLGWFGGPGFSGTMQMFTQNMKVPMVFAFLAICAEFLGSLGLLVGLCT
RIAAFGILSNMAVAIFMVHLPNGFFMNWTGKQSGEGFEYHLLVLGMALALIVGGGGKASLDRKIAVDPTWRTPH

Specific function: Unknown

COG id: COG2259

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 16760; Mature: 16760

Theoretical pI: Translated: 9.92; Mature: 9.92

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
6.5 %Met     (Translated Protein)
7.8 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
6.5 %Met     (Mature Protein)
7.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFNKILATRDDINLTIVRVFLGLVFFPHGAQKMLGWFGGPGFSGTMQMFTQNMKVPMVFA
CCCCCCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCHHHHHHHCCCCHHHHHH
FLAICAEFLGSLGLLVGLCTRIAAFGILSNMAVAIFMVHLPNGFFMNWTGKQSGEGFEYH
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCEEEECCCCCCCCCCHHH
LLVLGMALALIVGGGGKASLDRKIAVDPTWRTPH
HHHHHHHHHHHHCCCCCCCCCCEEECCCCCCCCC
>Mature Secondary Structure
MFNKILATRDDINLTIVRVFLGLVFFPHGAQKMLGWFGGPGFSGTMQMFTQNMKVPMVFA
CCCCCCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCHHHHHHHCCCCHHHHHH
FLAICAEFLGSLGLLVGLCTRIAAFGILSNMAVAIFMVHLPNGFFMNWTGKQSGEGFEYH
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCEEEECCCCCCCCCCHHH
LLVLGMALALIVGGGGKASLDRKIAVDPTWRTPH
HHHHHHHHHHHHCCCCCCCCCCEEECCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA