| Definition | Geobacter bemidjiensis Bem chromosome, complete genome. |
|---|---|
| Accession | NC_011146 |
| Length | 4,615,150 |
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The map label for this gene is ftsI [H]
Identifier: 197116883
GI number: 197116883
Start: 584180
End: 586162
Strand: Direct
Name: ftsI [H]
Synonym: Gbem_0485
Alternate gene names: 197116883
Gene position: 584180-586162 (Clockwise)
Preceding gene: 197116882
Following gene: 197116884
Centisome position: 12.66
GC content: 64.15
Gene sequence:
>1983_bases GTGATCGAGAAAAAGGAGAAATGGGCCAGAGTCCGGATGCGTTTCGTGGCCCTCTTGTTCGTGGTCGTCTTCGTGGCTAC CACGGGTCGCGCCTTTTACCTCCAGGTGCTCAACAACGACCGGCTGGTGAAGCTCGCGGAAAAACAGCACCAAAGGATCG TGGCGCTCACGCCTGCCCGCGGCGCCATCTACGACAGAACCAACGCCCCGTTCGCCGTCTCGATAGAGATGGATTCCTGC TACGCCGAGACGCGCAACATGGAAAACATCCCGCAGGAGGCGGCGCAGCTGGCGCCCCTTTTGGGTTACGGCGCGCAGGA GCTCGAGTCGAAGCTCAAGGGAGCCAAGAACTTCGTGTGGCTCGCGCGGCGCATCCCGCCGGAGCAGGCCGGGAAGGTGA AGGCGCTTGGGCTTGAGGGAGTCGGCTTCGTCAAGGAAAGCAAACGCTTCTACCCGAATTCCCAGGTGGCGGCCCATGTG GTGGGCTTTACCGGTGTCGATCCCGGCGGCCTGGAGGGGGTGGAGAAGAAGTACGACGCCACCATCCTCGGCAACACGGG ATTCCTGGTCACCGAGCGCGACGCCCTCGGGCGCGACATAGCACTCAAGAAGGGGAGCGAGGGCAAAAGCGGTTCCAAGG GAAACAACGTCGTCCTCACCCTGGATAAGAACGTTCAGTACATAGCGGAAAAGGAGCTGACCAACGCGGTGGTGAAAAAC GGCGCCAAGGCCGGCATCGCCATCGTGATGGAGCCCGACACCGGGCGGGTTTTGGCCATGGCCAACTACCCTTCCTTCAA CCCGAACAGCTTTGCCGAGTACGGGCAGGCGGCGCTTAGAAACCGCGCCATCGCCGACAGCTTCGAGCCCGGCTCCACCT TCAAGATCTTCCTGGTAGCTTCCGCACTCGAGGCGGGGGTGATCAGGCCCGGCGACATGTTCAACTGCGAAAACGGCAGC TACAGCGTGTACGGCAGGACCATTCACGATACGCACAAATACGGGGCGCTCAGCGTGCCCCAGATCCTCAAGTACTCCAG CAACATCGGCGCCGCCAAGATCGGCAGCCGGCTGGGGCCCGAAAGGCTCTACGCGGCCCTTACCGGCTTCGGTTTCGGCG AAAAGAGCAGCATCGATCTTCCGGGGGAGGCCTCCGGGATGTTGCGGCCGCAGTCCAAGTGGTACGGCATCGACCTCGCC ACCATCTCGTTCGGCCAGGGGGTGACGGCTACCGCGCTGCAGATCACCAACGCGGTGTCGGCTGTCGCCAACGGCGGCAA CCTGATGAAGCCGTACCTGGTGGATAGGATCGTCGACGACAACGGCGTGGTGCTGCAGCAGTTCGCACCCCAGGTGAAAA GGCGCATCATCTCGCCGGAGACGGCGAAGACGGTGGCCCGCATGCTGGAGGGGGTCGTGGTGGAAGGGGGGACCGGCACC GGGGCCGCGGTCGAAGGTTACCGCGTCGCGGGGAAAACCGGGACCGCCCAGAAGGTCGAGGGGCACGGCTACTCGGCCAG CAAGCGCACCGCCTCCTTTGTCGGTTTCGTTCCCCTGGACAAGCCGCGGCTCGCCATAATGGTCGTGGTGGACGAGCCGA CCACGAGCTCCTACGGCGGGGTGGTAGCGGCCCCGGCCTTCAGCGCCATAGCGCAGCAGACCCTCTGCTACCTGAACGTG GCACCGGACAAGAACGTCGTTGCCAAGAAGAAAAGCGGTGCCGCACCCGAGAAAAGCGCGCCCAAACCGGAGCCGGTGGC CGAGGGAGGGAGCGTCGAAGGGGGGAGCGTGGAAGGGACGGCGGCCGGTGCCATGCCGAACTTCCGGGGAATGAGCATGC GGCAGGTGCTCAAGGTGATGGAAAAGCGCGGTCTCAACGTCAAGCTGCAGGGAAGCGGCAGGGCGGTCGAGCAGAACCCG GCCCCCGGGAGCCGCATCACCACGCAGGATCAGGTCTGGGTCAAGTTCGTCCCTTCGGCCTGA
Upstream 100 bases:
>100_bases TCGAGGTGGCTTCGCTCAAGGCGCCGGCCCGGATCGAGGCGCTGGCCAAGGGTGAACTTGGCATGGCGCTCCCCTCCGAT CAGCAGGTGGTCCTGGTCAA
Downstream 100 bases:
>100_bases CAATGGGGGTAGCATGAAACTCGCACAACTTCTGAATTGCCTCGCCTCGCCCGAGCTCTCCGGAGACGCCGGTATCGAGA TAGAGTCGCTTTGCTACGAC
Product: bifunctional peptidoglycan transglycosylase/transpeptidase FtsI
Products: NA
Alternate protein names: PBP-2 [H]
Number of amino acids: Translated: 660; Mature: 660
Protein sequence:
>660_residues MIEKKEKWARVRMRFVALLFVVVFVATTGRAFYLQVLNNDRLVKLAEKQHQRIVALTPARGAIYDRTNAPFAVSIEMDSC YAETRNMENIPQEAAQLAPLLGYGAQELESKLKGAKNFVWLARRIPPEQAGKVKALGLEGVGFVKESKRFYPNSQVAAHV VGFTGVDPGGLEGVEKKYDATILGNTGFLVTERDALGRDIALKKGSEGKSGSKGNNVVLTLDKNVQYIAEKELTNAVVKN GAKAGIAIVMEPDTGRVLAMANYPSFNPNSFAEYGQAALRNRAIADSFEPGSTFKIFLVASALEAGVIRPGDMFNCENGS YSVYGRTIHDTHKYGALSVPQILKYSSNIGAAKIGSRLGPERLYAALTGFGFGEKSSIDLPGEASGMLRPQSKWYGIDLA TISFGQGVTATALQITNAVSAVANGGNLMKPYLVDRIVDDNGVVLQQFAPQVKRRIISPETAKTVARMLEGVVVEGGTGT GAAVEGYRVAGKTGTAQKVEGHGYSASKRTASFVGFVPLDKPRLAIMVVVDEPTTSSYGGVVAAPAFSAIAQQTLCYLNV APDKNVVAKKKSGAAPEKSAPKPEPVAEGGSVEGGSVEGTAAGAMPNFRGMSMRQVLKVMEKRGLNVKLQGSGRAVEQNP APGSRITTQDQVWVKFVPSA
Sequences:
>Translated_660_residues MIEKKEKWARVRMRFVALLFVVVFVATTGRAFYLQVLNNDRLVKLAEKQHQRIVALTPARGAIYDRTNAPFAVSIEMDSC YAETRNMENIPQEAAQLAPLLGYGAQELESKLKGAKNFVWLARRIPPEQAGKVKALGLEGVGFVKESKRFYPNSQVAAHV VGFTGVDPGGLEGVEKKYDATILGNTGFLVTERDALGRDIALKKGSEGKSGSKGNNVVLTLDKNVQYIAEKELTNAVVKN GAKAGIAIVMEPDTGRVLAMANYPSFNPNSFAEYGQAALRNRAIADSFEPGSTFKIFLVASALEAGVIRPGDMFNCENGS YSVYGRTIHDTHKYGALSVPQILKYSSNIGAAKIGSRLGPERLYAALTGFGFGEKSSIDLPGEASGMLRPQSKWYGIDLA TISFGQGVTATALQITNAVSAVANGGNLMKPYLVDRIVDDNGVVLQQFAPQVKRRIISPETAKTVARMLEGVVVEGGTGT GAAVEGYRVAGKTGTAQKVEGHGYSASKRTASFVGFVPLDKPRLAIMVVVDEPTTSSYGGVVAAPAFSAIAQQTLCYLNV APDKNVVAKKKSGAAPEKSAPKPEPVAEGGSVEGGSVEGTAAGAMPNFRGMSMRQVLKVMEKRGLNVKLQGSGRAVEQNP APGSRITTQDQVWVKFVPSA >Mature_660_residues MIEKKEKWARVRMRFVALLFVVVFVATTGRAFYLQVLNNDRLVKLAEKQHQRIVALTPARGAIYDRTNAPFAVSIEMDSC YAETRNMENIPQEAAQLAPLLGYGAQELESKLKGAKNFVWLARRIPPEQAGKVKALGLEGVGFVKESKRFYPNSQVAAHV VGFTGVDPGGLEGVEKKYDATILGNTGFLVTERDALGRDIALKKGSEGKSGSKGNNVVLTLDKNVQYIAEKELTNAVVKN GAKAGIAIVMEPDTGRVLAMANYPSFNPNSFAEYGQAALRNRAIADSFEPGSTFKIFLVASALEAGVIRPGDMFNCENGS YSVYGRTIHDTHKYGALSVPQILKYSSNIGAAKIGSRLGPERLYAALTGFGFGEKSSIDLPGEASGMLRPQSKWYGIDLA TISFGQGVTATALQITNAVSAVANGGNLMKPYLVDRIVDDNGVVLQQFAPQVKRRIISPETAKTVARMLEGVVVEGGTGT GAAVEGYRVAGKTGTAQKVEGHGYSASKRTASFVGFVPLDKPRLAIMVVVDEPTTSSYGGVVAAPAFSAIAQQTLCYLNV APDKNVVAKKKSGAAPEKSAPKPEPVAEGGSVEGGSVEGTAAGAMPNFRGMSMRQVLKVMEKRGLNVKLQGSGRAVEQNP APGSRITTQDQVWVKFVPSA
Specific function: Synthesis of cross-linked peptidoglycan from the lipid intermediates [H]
COG id: COG0768
COG function: function code M; Cell division protein FtsI/penicillin-binding protein 2
Gene ontology:
Cell location: Cell inner membrane; Peripheral membrane protein [H]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the transpeptidase family [H]
Homologues:
Organism=Escherichia coli, GI1786272, Length=565, Percent_Identity=34.5132743362832, Blast_Score=332, Evalue=6e-92, Organism=Escherichia coli, GI1786854, Length=617, Percent_Identity=24.9594813614263, Blast_Score=126, Evalue=4e-30,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR012338 - InterPro: IPR005311 - InterPro: IPR001460 [H]
Pfam domain/function: PF03717 PBP_dimer; PF00905 Transpeptidase [H]
EC number: NA
Molecular weight: Translated: 70304; Mature: 70304
Theoretical pI: Translated: 10.00; Mature: 10.00
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIEKKEKWARVRMRFVALLFVVVFVATTGRAFYLQVLNNDRLVKLAEKQHQRIVALTPAR CCCCHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCEEEEHHHCCCEEEEECCCC GAIYDRTNAPFAVSIEMDSCYAETRNMENIPQEAAQLAPLLGYGAQELESKLKGAKNFVW CCEEECCCCCEEEEEECHHHHHHHCCHHCCHHHHHHHHHHHCCCHHHHHHHHCCCCCEEE LARRIPPEQAGKVKALGLEGVGFVKESKRFYPNSQVAAHVVGFTGVDPGGLEGVEKKYDA EECCCCHHHCCCEEEECCCCCCCHHHCCCCCCCCCEEEEEEEECCCCCCCCCCHHHHCCE TILGNTGFLVTERDALGRDIALKKGSEGKSGSKGNNVVLTLDKNVQYIAEKELTNAVVKN EEECCCCEEEECHHHCCCCEEEECCCCCCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHC GAKAGIAIVMEPDTGRVLAMANYPSFNPNSFAEYGQAALRNRAIADSFEPGSTFKIFLVA CCCCCEEEEEECCCCCEEEEECCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCEEEEEEE SALEAGVIRPGDMFNCENGSYSVYGRTIHDTHKYGALSVPQILKYSSNIGAAKIGSRLGP EHHHCCCCCCCCCCCCCCCCEEEEECEECCCCCCCCCCHHHHHHHCCCCCHHHHHCCCCH ERLYAALTGFGFGEKSSIDLPGEASGMLRPQSKWYGIDLATISFGQGVTATALQITNAVS HHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEEEECCCCCCHHHHHHHHHHH AVANGGNLMKPYLVDRIVDDNGVVLQQFAPQVKRRIISPETAKTVARMLEGVVVEGGTGT HHHCCCCCCCHHHHHHEECCCCEEHHHHHHHHHHHHCCCHHHHHHHHHHCCEEEECCCCC GAAVEGYRVAGKTGTAQKVEGHGYSASKRTASFVGFVPLDKPRLAIMVVVDEPTTSSYGG CCEECCEEEECCCCCCCEECCCCCCCCCCCEEEEEEEECCCCCEEEEEEEECCCCCCCCC VVAAPAFSAIAQQTLCYLNVAPDKNVVAKKKSGAAPEKSAPKPEPVAEGGSVEGGSVEGT EEEHHHHHHHHHCEEEEEEECCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC AAGAMPNFRGMSMRQVLKVMEKRGLNVKLQGSGRAVEQNPAPGSRITTQDQVWVKFVPSA CCCCCCCCCCCCHHHHHHHHHHCCCEEEECCCCCEECCCCCCCCCCCCCCCEEEEEECCC >Mature Secondary Structure MIEKKEKWARVRMRFVALLFVVVFVATTGRAFYLQVLNNDRLVKLAEKQHQRIVALTPAR CCCCHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCEEEEHHHCCCEEEEECCCC GAIYDRTNAPFAVSIEMDSCYAETRNMENIPQEAAQLAPLLGYGAQELESKLKGAKNFVW CCEEECCCCCEEEEEECHHHHHHHCCHHCCHHHHHHHHHHHCCCHHHHHHHHCCCCCEEE LARRIPPEQAGKVKALGLEGVGFVKESKRFYPNSQVAAHVVGFTGVDPGGLEGVEKKYDA EECCCCHHHCCCEEEECCCCCCCHHHCCCCCCCCCEEEEEEEECCCCCCCCCCHHHHCCE TILGNTGFLVTERDALGRDIALKKGSEGKSGSKGNNVVLTLDKNVQYIAEKELTNAVVKN EEECCCCEEEECHHHCCCCEEEECCCCCCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHC GAKAGIAIVMEPDTGRVLAMANYPSFNPNSFAEYGQAALRNRAIADSFEPGSTFKIFLVA CCCCCEEEEEECCCCCEEEEECCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCEEEEEEE SALEAGVIRPGDMFNCENGSYSVYGRTIHDTHKYGALSVPQILKYSSNIGAAKIGSRLGP EHHHCCCCCCCCCCCCCCCCEEEEECEECCCCCCCCCCHHHHHHHCCCCCHHHHHCCCCH ERLYAALTGFGFGEKSSIDLPGEASGMLRPQSKWYGIDLATISFGQGVTATALQITNAVS HHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEEEECCCCCCHHHHHHHHHHH AVANGGNLMKPYLVDRIVDDNGVVLQQFAPQVKRRIISPETAKTVARMLEGVVVEGGTGT HHHCCCCCCCHHHHHHEECCCCEEHHHHHHHHHHHHCCCHHHHHHHHHHCCEEEECCCCC GAAVEGYRVAGKTGTAQKVEGHGYSASKRTASFVGFVPLDKPRLAIMVVVDEPTTSSYGG CCEECCEEEECCCCCCCEECCCCCCCCCCCEEEEEEEECCCCCEEEEEEEECCCCCCCCC VVAAPAFSAIAQQTLCYLNVAPDKNVVAKKKSGAAPEKSAPKPEPVAEGGSVEGGSVEGT EEEHHHHHHHHHCEEEEEEECCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC AAGAMPNFRGMSMRQVLKVMEKRGLNVKLQGSGRAVEQNPAPGSRITTQDQVWVKFVPSA CCCCCCCCCCCCHHHHHHHHHHCCCEEEECCCCCEECCCCCCCCCCCCCCCEEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 3126399 [H]