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The map label for this gene is yqfO [H]

Identifier: 197116876

GI number: 197116876

Start: 578592

End: 579710

Strand: Direct

Name: yqfO [H]

Synonym: Gbem_0478

Alternate gene names: 197116876

Gene position: 578592-579710 (Clockwise)

Preceding gene: 197116875

Following gene: 197116877

Centisome position: 12.54

GC content: 64.79

Gene sequence:

>1119_bases
ATGATTACTCCTAGAGTTTCAGATATATCCGGAATCACTGGCAAAATTGCCCCAACCCACCTCGCCGAGTCCTGGGACAA
CGTGGGGCTGCAGCTTGGGGATCCCTCCAGCCAGGTCTCGCGGATCATGGTCGCCCTGGATCCCGGCCGCCCCGCCGTCG
AGGCCGCGGTCGAGATCGGCTGCCAGCTTCTGATAACGCACCACCCCTTCATCTTCACCCCGCTTAAAAAGATCTCCACC
GCGGATGAAACCGGCCGCCTCGCCATACTCGCCCTGAAAAACGACCTCTCTATCATCTCGCTGCATACCAACTTCGACAT
AGCCCCCGGTGGCGTAAACGATCTCCTGGCCGGGCTGCTCGGCATCCAGGGGGCGCAGCCGCTCAGGATCACCGGCGGCG
ACGAGTACGTGAAGATGGTCCTTTTCGCGCCGTCCGGCTGCGAGGAGAAGCTTTTAGGAGCGCTTTCCCCCTTCATGCCT
CACATCGGCAACTACCGCGACTGCTCCTACCAGGGTGAGGGGACCGGGAGGTTCACCCCGCTTCCGGGGGCGCGCCCGTT
CGTTGGGGAGGTTGGGGCGAGCCATGCCGAGCCCGAGAGCCGGCTGGAGATCCTGCTGGTCAAGGAACGCATCGCCGCCG
CGGTCGCGGCCCTTAAGGGCGCGCATCCTTACGAGGAGCCGGCCTACGATCTTTACCCGGTGCTGAACCGGGGGGAGGCG
TACGGGCTCGGTAGAATCGGGAAGCTGGCGGAACCGGTCACTGCCGGCGCCTATGCGCTGCAGGTCAAGGAGCGGCTGGC
GGCGACCGGGGTGCGGCTGGTGGGCGACCCGGCTCGGCAGGTGAAGAAGGTGGCACTTTGCGGCGGCTCCGGCGCGTCGC
TCATCCACGAGGCGCAGCGCAAGGGGGCCGATCTTTTGGTCACCGCGGATGTGAAGTACCACGAGGCGCGCGAGGCTGAA
GCGCTGGGGCTGGCGCTGCTTGACGCCGGGCATTTCTCGACCGAGTACCCCATGGTTCAGGGGTTGGCCGGGCAGCTCAG
AGCCGCACTGCAGGCAAAGCGGTTCGAGGCAGAGGTTTTGGAGTACCAAGGAGAGCGCGAACCTTTCAGTTTCTGGTAG

Upstream 100 bases:

>100_bases
TAGGGATGCCCTTAAAGCACCTGGTCAGACGAAAAAATACACCTAAAGTGGGGAGAAAGAGTGCACACCAAGCGGTTGCA
CTCTTTTTCTTTTGTGCGCG

Downstream 100 bases:

>100_bases
GTCGCGCTCTTTGTGCACATAAAACAGGAAGTTGGGGAGGCGGATTTTGCGTAACAGTCTGAAGTCGTTATACGAATTGC
AGGAAATCGACCTGAGGATC

Product: dimetal-binding protein YqfO

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 372; Mature: 372

Protein sequence:

>372_residues
MITPRVSDISGITGKIAPTHLAESWDNVGLQLGDPSSQVSRIMVALDPGRPAVEAAVEIGCQLLITHHPFIFTPLKKIST
ADETGRLAILALKNDLSIISLHTNFDIAPGGVNDLLAGLLGIQGAQPLRITGGDEYVKMVLFAPSGCEEKLLGALSPFMP
HIGNYRDCSYQGEGTGRFTPLPGARPFVGEVGASHAEPESRLEILLVKERIAAAVAALKGAHPYEEPAYDLYPVLNRGEA
YGLGRIGKLAEPVTAGAYALQVKERLAATGVRLVGDPARQVKKVALCGGSGASLIHEAQRKGADLLVTADVKYHEAREAE
ALGLALLDAGHFSTEYPMVQGLAGQLRAALQAKRFEAEVLEYQGEREPFSFW

Sequences:

>Translated_372_residues
MITPRVSDISGITGKIAPTHLAESWDNVGLQLGDPSSQVSRIMVALDPGRPAVEAAVEIGCQLLITHHPFIFTPLKKIST
ADETGRLAILALKNDLSIISLHTNFDIAPGGVNDLLAGLLGIQGAQPLRITGGDEYVKMVLFAPSGCEEKLLGALSPFMP
HIGNYRDCSYQGEGTGRFTPLPGARPFVGEVGASHAEPESRLEILLVKERIAAAVAALKGAHPYEEPAYDLYPVLNRGEA
YGLGRIGKLAEPVTAGAYALQVKERLAATGVRLVGDPARQVKKVALCGGSGASLIHEAQRKGADLLVTADVKYHEAREAE
ALGLALLDAGHFSTEYPMVQGLAGQLRAALQAKRFEAEVLEYQGEREPFSFW
>Mature_372_residues
MITPRVSDISGITGKIAPTHLAESWDNVGLQLGDPSSQVSRIMVALDPGRPAVEAAVEIGCQLLITHHPFIFTPLKKIST
ADETGRLAILALKNDLSIISLHTNFDIAPGGVNDLLAGLLGIQGAQPLRITGGDEYVKMVLFAPSGCEEKLLGALSPFMP
HIGNYRDCSYQGEGTGRFTPLPGARPFVGEVGASHAEPESRLEILLVKERIAAAVAALKGAHPYEEPAYDLYPVLNRGEA
YGLGRIGKLAEPVTAGAYALQVKERLAATGVRLVGDPARQVKKVALCGGSGASLIHEAQRKGADLLVTADVKYHEAREAE
ALGLALLDAGHFSTEYPMVQGLAGQLRAALQAKRFEAEVLEYQGEREPFSFW

Specific function: Unknown

COG id: COG0327

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0135 (NIF3) family [H]

Homologues:

Organism=Homo sapiens, GI215272360, Length=373, Percent_Identity=26.2734584450402, Blast_Score=112, Evalue=8e-25,
Organism=Homo sapiens, GI56605983, Length=373, Percent_Identity=26.2734584450402, Blast_Score=112, Evalue=8e-25,
Organism=Homo sapiens, GI209862879, Length=373, Percent_Identity=26.2734584450402, Blast_Score=112, Evalue=8e-25,
Organism=Homo sapiens, GI215272362, Length=124, Percent_Identity=35.4838709677419, Blast_Score=78, Evalue=2e-14,
Organism=Drosophila melanogaster, GI19921430, Length=116, Percent_Identity=39.6551724137931, Blast_Score=86, Evalue=4e-17,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002678
- InterPro:   IPR017221 [H]

Pfam domain/function: PF01784 NIF3 [H]

EC number: NA

Molecular weight: Translated: 39658; Mature: 39658

Theoretical pI: Translated: 6.01; Mature: 6.01

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MITPRVSDISGITGKIAPTHLAESWDNVGLQLGDPSSQVSRIMVALDPGRPAVEAAVEIG
CCCCCCCCCCCCCCCCCHHHHHHHHHHCCEEECCCHHHHCEEEEEECCCCHHHHHHHHHC
CQLLITHHPFIFTPLKKISTADETGRLAILALKNDLSIISLHTNFDIAPGGVNDLLAGLL
EEEEEECCCEEECCHHHHCCCCCCCCEEEEEEECCCEEEEEECCCCCCCCCHHHHHHHHH
GIQGAQPLRITGGDEYVKMVLFAPSGCEEKLLGALSPFMPHIGNYRDCSYQGEGTGRFTP
HCCCCCCEEEECCCCEEEEEEECCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCC
LPGARPFVGEVGASHAEPESRLEILLVKERIAAAVAALKGAHPYEEPAYDLYPVLNRGEA
CCCCCCCHHHCCCCCCCCHHHEEEEEHHHHHHHHHHHHHCCCCCCCCCCHHHHHHCCCCC
YGLGRIGKLAEPVTAGAYALQVKERLAATGVRLVGDPARQVKKVALCGGSGASLIHEAQR
CCCCCHHHHCCCHHCCHHHHHHHHHHHHCCCEEECCHHHHHHHHEEECCCCHHHHHHHHH
KGADLLVTADVKYHEAREAEALGLALLDAGHFSTEYPMVQGLAGQLRAALQAKRFEAEVL
CCCCEEEEECCCHHHHHHHHHHEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
EYQGEREPFSFW
HHCCCCCCCCCC
>Mature Secondary Structure
MITPRVSDISGITGKIAPTHLAESWDNVGLQLGDPSSQVSRIMVALDPGRPAVEAAVEIG
CCCCCCCCCCCCCCCCCHHHHHHHHHHCCEEECCCHHHHCEEEEEECCCCHHHHHHHHHC
CQLLITHHPFIFTPLKKISTADETGRLAILALKNDLSIISLHTNFDIAPGGVNDLLAGLL
EEEEEECCCEEECCHHHHCCCCCCCCEEEEEEECCCEEEEEECCCCCCCCCHHHHHHHHH
GIQGAQPLRITGGDEYVKMVLFAPSGCEEKLLGALSPFMPHIGNYRDCSYQGEGTGRFTP
HCCCCCCEEEECCCCEEEEEEECCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCC
LPGARPFVGEVGASHAEPESRLEILLVKERIAAAVAALKGAHPYEEPAYDLYPVLNRGEA
CCCCCCCHHHCCCCCCCCHHHEEEEEHHHHHHHHHHHHHCCCCCCCCCCHHHHHHCCCCC
YGLGRIGKLAEPVTAGAYALQVKERLAATGVRLVGDPARQVKKVALCGGSGASLIHEAQR
CCCCCHHHHCCCHHCCHHHHHHHHHHHHCCCEEECCHHHHHHHHEEECCCCHHHHHHHHH
KGADLLVTADVKYHEAREAEALGLALLDAGHFSTEYPMVQGLAGQLRAALQAKRFEAEVL
CCCCEEEEECCCHHHHHHHHHHEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
EYQGEREPFSFW
HHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8969508; 9384377 [H]