Definition Geobacter bemidjiensis Bem chromosome, complete genome.
Accession NC_011146
Length 4,615,150

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The map label for this gene is 197116819

Identifier: 197116819

GI number: 197116819

Start: 495529

End: 496731

Strand: Reverse

Name: 197116819

Synonym: Gbem_0421

Alternate gene names: NA

Gene position: 496731-495529 (Counterclockwise)

Preceding gene: 197116820

Following gene: 197116818

Centisome position: 10.76

GC content: 36.33

Gene sequence:

>1203_bases
ATGCCAGACAAAAATTATACTTTTCAATTACTGACAGTTGATAGCAGTCGTACAAGCAAAATACAAACAGAAGAACAAAT
GCTTTATTCATTAATGTCTAACAACGACTTGTGGAATTCGCCAAAACTCCATAAGAATAAAATTGAATGGGGTGGCCTTT
CCGTTACTGTCACCGAAGTTGACATGAAAGGCACATCCGAAAGCCCACAAAAAGCCTTCACTATAAGTTCTGTTGGACAC
ATTGAACCGTTAGAAAAATTCAGGTTACCGTTGACTTCACATATTCAAAAACAAGATTTTTCGCTTGTTTACATTTTGAC
TGATGAAATATCAGAACAGATCGCATGTGAGATATATCCAAAACTAAACAGGATTGAAAATAGGTTGAGACATTATTTAA
TAAAATTCTTTGTTACAAAACTTGGACCAGATTGGTGGAGACTCACAGCAGATGCTGAAATGCAAAAAAAAGCACATCAA
CGACGGAACAACGAAAGAGTTTTTTCTCAACATATTGATAACAAGGCGTATCTCATAGATTTTTTTGAACTAGGTAAAAT
TGTTTATGCCCAAACTTCAGGATATATAGAGAAAGATGACATTATAAGTAAGTTAATGAGTCTTGACGAGAGCGTGGAGG
CATTGAAAAGGTTCAAAGAAGAATTACAGAGTAACTATACAAAATATTTTAAAGAAACCTTCAAAGACAAAGGCTTCCAA
GATAAATGGATTCGTTTAGAAGAAATTAGACATAAAGTAGCACATAATAACTTGTTTGTGCATGAAGACCTAATAAAAGC
CAACGAATATATAGATAGCTTGCAATCTATAATAGATGAAGCTGAACAAAAAATAGACGAAGTCGCATTCAGCAAGGGCG
AGCAAGCGGCAATACAAGAATCAATAATGGAAAGCCTCTCTCAGCCTGTTACCTCCCCAACAGGTCAATTTTCAGCAATT
ACGAAAGAAATACTACTAGACGAACTTGAAAAACAGGAACGAATTGAAAGAGAACATGGCGGTTACGTTGGCTTATCTCG
ATTCGTCAAAATATGCCTTGGCGACCAAGGTTATGACTACGTATCTTCTTATAATATTATCAACGAATTAGTCGAGGCCA
AAGAACTTGAGCTATACGACAAATCAACAGCGGACGGTTATCCTGCGCGAGCAATAAGAAGGATGAAGATTGCAGAGGAC
TGA

Upstream 100 bases:

>100_bases
ACTGACACATAACAAGCGCTCGGACCGTGATCGGGCATAAAGCCGCCCGTCAGGTCAAGCGCGGCCCCGTTGAACAAGTA
AATATATTCGGAGGATGCGA

Downstream 100 bases:

>100_bases
CTATCTTTCACCTTGGCTCTTAGAACCAGCATTTATTAAGGAAACGAGTAAGATGTTCAACCAGCGGCAAGACCGGCTTA
GGTCCGGTCAGCCTTGTGAC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 400; Mature: 399

Protein sequence:

>400_residues
MPDKNYTFQLLTVDSSRTSKIQTEEQMLYSLMSNNDLWNSPKLHKNKIEWGGLSVTVTEVDMKGTSESPQKAFTISSVGH
IEPLEKFRLPLTSHIQKQDFSLVYILTDEISEQIACEIYPKLNRIENRLRHYLIKFFVTKLGPDWWRLTADAEMQKKAHQ
RRNNERVFSQHIDNKAYLIDFFELGKIVYAQTSGYIEKDDIISKLMSLDESVEALKRFKEELQSNYTKYFKETFKDKGFQ
DKWIRLEEIRHKVAHNNLFVHEDLIKANEYIDSLQSIIDEAEQKIDEVAFSKGEQAAIQESIMESLSQPVTSPTGQFSAI
TKEILLDELEKQERIEREHGGYVGLSRFVKICLGDQGYDYVSSYNIINELVEAKELELYDKSTADGYPARAIRRMKIAED

Sequences:

>Translated_400_residues
MPDKNYTFQLLTVDSSRTSKIQTEEQMLYSLMSNNDLWNSPKLHKNKIEWGGLSVTVTEVDMKGTSESPQKAFTISSVGH
IEPLEKFRLPLTSHIQKQDFSLVYILTDEISEQIACEIYPKLNRIENRLRHYLIKFFVTKLGPDWWRLTADAEMQKKAHQ
RRNNERVFSQHIDNKAYLIDFFELGKIVYAQTSGYIEKDDIISKLMSLDESVEALKRFKEELQSNYTKYFKETFKDKGFQ
DKWIRLEEIRHKVAHNNLFVHEDLIKANEYIDSLQSIIDEAEQKIDEVAFSKGEQAAIQESIMESLSQPVTSPTGQFSAI
TKEILLDELEKQERIEREHGGYVGLSRFVKICLGDQGYDYVSSYNIINELVEAKELELYDKSTADGYPARAIRRMKIAED
>Mature_399_residues
PDKNYTFQLLTVDSSRTSKIQTEEQMLYSLMSNNDLWNSPKLHKNKIEWGGLSVTVTEVDMKGTSESPQKAFTISSVGHI
EPLEKFRLPLTSHIQKQDFSLVYILTDEISEQIACEIYPKLNRIENRLRHYLIKFFVTKLGPDWWRLTADAEMQKKAHQR
RNNERVFSQHIDNKAYLIDFFELGKIVYAQTSGYIEKDDIISKLMSLDESVEALKRFKEELQSNYTKYFKETFKDKGFQD
KWIRLEEIRHKVAHNNLFVHEDLIKANEYIDSLQSIIDEAEQKIDEVAFSKGEQAAIQESIMESLSQPVTSPTGQFSAIT
KEILLDELEKQERIEREHGGYVGLSRFVKICLGDQGYDYVSSYNIINELVEAKELELYDKSTADGYPARAIRRMKIAED

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 46556; Mature: 46425

Theoretical pI: Translated: 5.28; Mature: 5.28

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPDKNYTFQLLTVDSSRTSKIQTEEQMLYSLMSNNDLWNSPKLHKNKIEWGGLSVTVTEV
CCCCCEEEEEEEECCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCEEEEEEEE
DMKGTSESPQKAFTISSVGHIEPLEKFRLPLTSHIQKQDFSLVYILTDEISEQIACEIYP
ECCCCCCCCCCEEEECCCCCCCHHHHHCCCHHHHHHHCCCCEEEEEEHHHHHHHHHHHHH
KLNRIENRLRHYLIKFFVTKLGPDWWRLTADAEMQKKAHQRRNNERVFSQHIDNKAYLID
HHHHHHHHHHHHHHHHHHHHHCCCCEEECCCHHHHHHHHHHCCCHHHHHHHCCCCCEEEE
FFELGKIVYAQTSGYIEKDDIISKLMSLDESVEALKRFKEELQSNYTKYFKETFKDKGFQ
HHHHCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
DKWIRLEEIRHKVAHNNLFVHEDLIKANEYIDSLQSIIDEAEQKIDEVAFSKGEQAAIQE
HHHHHHHHHHHHHHHCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHH
SIMESLSQPVTSPTGQFSAITKEILLDELEKQERIEREHGGYVGLSRFVKICLGDQGYDY
HHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCEECHHHHHHHHHCCCCCHH
VSSYNIINELVEAKELELYDKSTADGYPARAIRRMKIAED
HHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCC
>Mature Secondary Structure 
PDKNYTFQLLTVDSSRTSKIQTEEQMLYSLMSNNDLWNSPKLHKNKIEWGGLSVTVTEV
CCCCEEEEEEEECCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCEEEEEEEE
DMKGTSESPQKAFTISSVGHIEPLEKFRLPLTSHIQKQDFSLVYILTDEISEQIACEIYP
ECCCCCCCCCCEEEECCCCCCCHHHHHCCCHHHHHHHCCCCEEEEEEHHHHHHHHHHHHH
KLNRIENRLRHYLIKFFVTKLGPDWWRLTADAEMQKKAHQRRNNERVFSQHIDNKAYLID
HHHHHHHHHHHHHHHHHHHHHCCCCEEECCCHHHHHHHHHHCCCHHHHHHHCCCCCEEEE
FFELGKIVYAQTSGYIEKDDIISKLMSLDESVEALKRFKEELQSNYTKYFKETFKDKGFQ
HHHHCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
DKWIRLEEIRHKVAHNNLFVHEDLIKANEYIDSLQSIIDEAEQKIDEVAFSKGEQAAIQE
HHHHHHHHHHHHHHHCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHH
SIMESLSQPVTSPTGQFSAITKEILLDELEKQERIEREHGGYVGLSRFVKICLGDQGYDY
HHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCEECHHHHHHHHHCCCCCHH
VSSYNIINELVEAKELELYDKSTADGYPARAIRRMKIAED
HHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA