Definition Geobacter bemidjiensis Bem chromosome, complete genome.
Accession NC_011146
Length 4,615,150

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The map label for this gene is 197116815

Identifier: 197116815

GI number: 197116815

Start: 491894

End: 492571

Strand: Reverse

Name: 197116815

Synonym: Gbem_0417

Alternate gene names: NA

Gene position: 492571-491894 (Counterclockwise)

Preceding gene: 197116816

Following gene: 197116812

Centisome position: 10.67

GC content: 44.84

Gene sequence:

>678_bases
ATGATAATTCCTGACAGAAAAGAAAAATACGTCTGTAGAGCCTGTGACAACCAATGTTTTCACAGGCCGGCTTCCAATGG
CAAGTCTTTTGGAAAGAGATCTGGCACAGGCTCTGAATGGCACTATAAAACCTACGAGGTCCTACAGTGTGAGCATTGCG
AGAATGTCGTTCTTTGCATTCACCACTGGACAAACCCTGGCCCAATGATCGGTGACTCGTACATCACCAAGACCGAATTT
TTCCCACCTAAACAATTTTGGAAGAAACCGTTATGGTTCCCAAAGCTCTCAAAGGCATACCAAAAGATATTCTCTGAGGT
TTACTCAGCTCTAGATTCATCTCTTTTCATTCTTGCGGCAACTGGCATTAGGACAGCCCTAGATAAAGTAATGGTGGAAA
AAATAGGTGATATTGGACGGTTTGAGACAAAGGTCGACAGATTAGTGGAAAAAGAAATTATTACCCCCGCTGACAAAGAA
CTGTTAATGGCGGTTGTGAACGCCGGTAGTGCCTCAGCACACCGCGGCTACTCTCCCACTATCAAGGCCACAACCCACAT
GATGGAAATTACAGAACACATCTTTTATAAGCTGTGCTTCGAGCAGAACAAAACTGCTGACTTGCTATCAAAGGCGAGAA
CACTTAGGCGCGCAACTCCGGGAAGAAAGAAGGCATAA

Upstream 100 bases:

>100_bases
GAAAAGAAATAGCGAAATGTCCAACTTGCGGCACGACCAGACCGCCCGGAAAGGCTGGGCGGGCTGGTCAGCCTTATGGC
GTTATGCTTAAAGGAAAGAG

Downstream 100 bases:

>100_bases
CCAGCGCTAGGACCATGGCCGGGCAGAGCCCTGCCCGGCAGGTCAAGCACAAGACCGTTGGTCGGCGCGAACAGCCGGTT
CATGCAGCGTGTTTATGCTT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 225; Mature: 225

Protein sequence:

>225_residues
MIIPDRKEKYVCRACDNQCFHRPASNGKSFGKRSGTGSEWHYKTYEVLQCEHCENVVLCIHHWTNPGPMIGDSYITKTEF
FPPKQFWKKPLWFPKLSKAYQKIFSEVYSALDSSLFILAATGIRTALDKVMVEKIGDIGRFETKVDRLVEKEIITPADKE
LLMAVVNAGSASAHRGYSPTIKATTHMMEITEHIFYKLCFEQNKTADLLSKARTLRRATPGRKKA

Sequences:

>Translated_225_residues
MIIPDRKEKYVCRACDNQCFHRPASNGKSFGKRSGTGSEWHYKTYEVLQCEHCENVVLCIHHWTNPGPMIGDSYITKTEF
FPPKQFWKKPLWFPKLSKAYQKIFSEVYSALDSSLFILAATGIRTALDKVMVEKIGDIGRFETKVDRLVEKEIITPADKE
LLMAVVNAGSASAHRGYSPTIKATTHMMEITEHIFYKLCFEQNKTADLLSKARTLRRATPGRKKA
>Mature_225_residues
MIIPDRKEKYVCRACDNQCFHRPASNGKSFGKRSGTGSEWHYKTYEVLQCEHCENVVLCIHHWTNPGPMIGDSYITKTEF
FPPKQFWKKPLWFPKLSKAYQKIFSEVYSALDSSLFILAATGIRTALDKVMVEKIGDIGRFETKVDRLVEKEIITPADKE
LLMAVVNAGSASAHRGYSPTIKATTHMMEITEHIFYKLCFEQNKTADLLSKARTLRRATPGRKKA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 25697; Mature: 25697

Theoretical pI: Translated: 9.64; Mature: 9.64

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.1 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
5.8 %Cys+Met (Translated Protein)
3.1 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
5.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIIPDRKEKYVCRACDNQCFHRPASNGKSFGKRSGTGSEWHYKTYEVLQCEHCENVVLCI
CCCCCCCHHHHHHHHHHHHHCCCCCCCHHHCCCCCCCCCCCCHHHHHHHHHCCCCEEEEE
HHWTNPGPMIGDSYITKTEFFPPKQFWKKPLWFPKLSKAYQKIFSEVYSALDSSLFILAA
EECCCCCCCCCCCHHCCCCCCCCHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCEEEEEH
TGIRTALDKVMVEKIGDIGRFETKVDRLVEKEIITPADKELLMAVVNAGSASAHRGYSPT
HHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCCCCCC
IKATTHMMEITEHIFYKLCFEQNKTADLLSKARTLRRATPGRKKA
HHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCC
>Mature Secondary Structure
MIIPDRKEKYVCRACDNQCFHRPASNGKSFGKRSGTGSEWHYKTYEVLQCEHCENVVLCI
CCCCCCCHHHHHHHHHHHHHCCCCCCCHHHCCCCCCCCCCCCHHHHHHHHHCCCCEEEEE
HHWTNPGPMIGDSYITKTEFFPPKQFWKKPLWFPKLSKAYQKIFSEVYSALDSSLFILAA
EECCCCCCCCCCCHHCCCCCCCCHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCEEEEEH
TGIRTALDKVMVEKIGDIGRFETKVDRLVEKEIITPADKELLMAVVNAGSASAHRGYSPT
HHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCCCCCC
IKATTHMMEITEHIFYKLCFEQNKTADLLSKARTLRRATPGRKKA
HHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA