Definition Geobacter bemidjiensis Bem chromosome, complete genome.
Accession NC_011146
Length 4,615,150

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The map label for this gene is 197116791

Identifier: 197116791

GI number: 197116791

Start: 469074

End: 470057

Strand: Reverse

Name: 197116791

Synonym: Gbem_0393

Alternate gene names: NA

Gene position: 470057-469074 (Counterclockwise)

Preceding gene: 197116792

Following gene: 197116790

Centisome position: 10.19

GC content: 59.55

Gene sequence:

>984_bases
TTGCGCAGAGTAGGCTTTACCACCACCATCCCGCTCGAGGTGCTGATCGCGGCGGGCGTGGTTCCCATCGACCTGAACAA
CGTCTTCATCACCCACCATGACAACGCGTCGCTCATCGAAGATGCAGAACTCACCGGTTTCCCGAGGAATGTCTGCGCCT
GGATCAAGGGGATCTACGGCGCCGTGGTGCAAAGCGGCGTCACCGAACTGATCGCCGTCACCGAGGGGGACTGCAGCTAC
ACCAAGGCGCTCATGGAGGTGCTCTCCCTGAACGGGGTGCACGTCTACCCCTTCGCCTATCCTGCCGGGCGCGAGGCTGT
GCCGCTCAAAAAAGAGATCGAAAAGCTGATGGGACAGTTCGGCGTCGACTGGGACCATGTGGGCGAGGCGAAAAAGCGCC
TGGACCGGATCCGCGCCAAAGTCCACGAAATTGACCGCCTCTCCTGGCAGGAAGACAAGGTGACCGGGGAGGAGAACCAT
TACTTCCAGGTCTGCACCTCGGACATGAACGGCGACCCGGACGCGTTCGAGGCCGAGGTCGACGCCTTCATCGCCGCCGC
GGCCGTCCGTGCGCCGCGCCACGAGCGCTTAAGGCTCGCTTTCCTGGGGGTGCCGCCGATCATATCCGGACTTTACGGCT
TTCTGGAGGAGGTAGGCGCCAGGGTAGTCTTCAACGAGACCCAGCGGCAGTTCTCCATGCCTTTCGGGATCGAGGACCTG
GTGGAACAGTACCGAGCCTACAGCTATCCCTATGACATCTTCCATCGGCTCGCTGACATCTCGCGGGAGATAGAGAAGCG
CCGCATCGACGGCGTCATCCATTATGTTCAGTCTTTCTGCTTCCGGCAGATAGAGGACATGGTTCTCAGAAAAAGCATCA
AGCTTCCAATCATGACGCTCGAGGGTGACAAACCGGGCGCCATAGATGCCAGAACAAAGATCAGGGTGGAAGGATTTCTG
GAACTGCTTGAGGATCGTGACTGA

Upstream 100 bases:

>100_bases
GGACACCCTTTCGGTTTCCTCCACACTTCCCTTCGCATTCGGCGGCCTCGCCATAGGGGCGGTGCTCATCTACCTCAATT
TCATCAAGACGGAGTAAGTT

Downstream 100 bases:

>100_bases
GAGGAGGAGCCTCATCGTGTTGCAATCCTGTTCCGATACAGAGCCCATTTACTGACCCGTGACAAAATATACAATGCGAC
CTTGATTTCGCAAGTGTAGT

Product: (R)-2-hydroxyglutaryl-CoA dehydratase D component-like protein

Products: NA

Alternate protein names: Benzoyl-CoA Reductase/2-Hydroxyglutaryl-CoA Dehydratase; 2-Hydroxyglutaryl-Coa Dehydratase Subunit; 2-Hydroxyglutaryl-CoA Dehydratase Subunit; 2-Hydroxyglutaryl-CoA Dehydratase Subunit D

Number of amino acids: Translated: 327; Mature: 327

Protein sequence:

>327_residues
MRRVGFTTTIPLEVLIAAGVVPIDLNNVFITHHDNASLIEDAELTGFPRNVCAWIKGIYGAVVQSGVTELIAVTEGDCSY
TKALMEVLSLNGVHVYPFAYPAGREAVPLKKEIEKLMGQFGVDWDHVGEAKKRLDRIRAKVHEIDRLSWQEDKVTGEENH
YFQVCTSDMNGDPDAFEAEVDAFIAAAAVRAPRHERLRLAFLGVPPIISGLYGFLEEVGARVVFNETQRQFSMPFGIEDL
VEQYRAYSYPYDIFHRLADISREIEKRRIDGVIHYVQSFCFRQIEDMVLRKSIKLPIMTLEGDKPGAIDARTKIRVEGFL
ELLEDRD

Sequences:

>Translated_327_residues
MRRVGFTTTIPLEVLIAAGVVPIDLNNVFITHHDNASLIEDAELTGFPRNVCAWIKGIYGAVVQSGVTELIAVTEGDCSY
TKALMEVLSLNGVHVYPFAYPAGREAVPLKKEIEKLMGQFGVDWDHVGEAKKRLDRIRAKVHEIDRLSWQEDKVTGEENH
YFQVCTSDMNGDPDAFEAEVDAFIAAAAVRAPRHERLRLAFLGVPPIISGLYGFLEEVGARVVFNETQRQFSMPFGIEDL
VEQYRAYSYPYDIFHRLADISREIEKRRIDGVIHYVQSFCFRQIEDMVLRKSIKLPIMTLEGDKPGAIDARTKIRVEGFL
ELLEDRD
>Mature_327_residues
MRRVGFTTTIPLEVLIAAGVVPIDLNNVFITHHDNASLIEDAELTGFPRNVCAWIKGIYGAVVQSGVTELIAVTEGDCSY
TKALMEVLSLNGVHVYPFAYPAGREAVPLKKEIEKLMGQFGVDWDHVGEAKKRLDRIRAKVHEIDRLSWQEDKVTGEENH
YFQVCTSDMNGDPDAFEAEVDAFIAAAAVRAPRHERLRLAFLGVPPIISGLYGFLEEVGARVVFNETQRQFSMPFGIEDL
VEQYRAYSYPYDIFHRLADISREIEKRRIDGVIHYVQSFCFRQIEDMVLRKSIKLPIMTLEGDKPGAIDARTKIRVEGFL
ELLEDRD

Specific function: Unknown

COG id: COG1775

COG function: function code E; Benzoyl-CoA reductase/2-hydroxyglutaryl-CoA dehydratase subunit, BcrC/BadD/HgdB

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 37020; Mature: 37020

Theoretical pI: Translated: 5.06; Mature: 5.06

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRRVGFTTTIPLEVLIAAGVVPIDLNNVFITHHDNASLIEDAELTGFPRNVCAWIKGIYG
CCCCCCCCCHHHHHHHHCCCEEEECCCEEEEECCCCCHHCCCCCCCCCHHHHHHHHHHHH
AVVQSGVTELIAVTEGDCSYTKALMEVLSLNGVHVYPFAYPAGREAVPLKKEIEKLMGQF
HHHHHHHHHEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCHHHHHHHHHHHH
GVDWDHVGEAKKRLDRIRAKVHEIDRLSWQEDKVTGEENHYFQVCTSDMNGDPDAFEAEV
CCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEECCCCCCCCHHHHHH
DAFIAAAAVRAPRHERLRLAFLGVPPIISGLYGFLEEVGARVVFNETQRQFSMPFGIEDL
HHHHHHHHHHCCCHHCEEEEEECCCHHHHHHHHHHHHHCCEEEEEHHHHHHCCCCCHHHH
VEQYRAYSYPYDIFHRLADISREIEKRRIDGVIHYVQSFCFRQIEDMVLRKSIKLPIMTL
HHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEE
EGDKPGAIDARTKIRVEGFLELLEDRD
CCCCCCCCCCHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MRRVGFTTTIPLEVLIAAGVVPIDLNNVFITHHDNASLIEDAELTGFPRNVCAWIKGIYG
CCCCCCCCCHHHHHHHHCCCEEEECCCEEEEECCCCCHHCCCCCCCCCHHHHHHHHHHHH
AVVQSGVTELIAVTEGDCSYTKALMEVLSLNGVHVYPFAYPAGREAVPLKKEIEKLMGQF
HHHHHHHHHEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCHHHHHHHHHHHH
GVDWDHVGEAKKRLDRIRAKVHEIDRLSWQEDKVTGEENHYFQVCTSDMNGDPDAFEAEV
CCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEECCCCCCCCHHHHHH
DAFIAAAAVRAPRHERLRLAFLGVPPIISGLYGFLEEVGARVVFNETQRQFSMPFGIEDL
HHHHHHHHHHCCCHHCEEEEEECCCHHHHHHHHHHHHHCCEEEEEHHHHHHCCCCCHHHH
VEQYRAYSYPYDIFHRLADISREIEKRRIDGVIHYVQSFCFRQIEDMVLRKSIKLPIMTL
HHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEE
EGDKPGAIDARTKIRVEGFLELLEDRD
CCCCCCCCCCHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA