| Definition | Geobacter bemidjiensis Bem chromosome, complete genome. |
|---|---|
| Accession | NC_011146 |
| Length | 4,615,150 |
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The map label for this gene is 197116791
Identifier: 197116791
GI number: 197116791
Start: 469074
End: 470057
Strand: Reverse
Name: 197116791
Synonym: Gbem_0393
Alternate gene names: NA
Gene position: 470057-469074 (Counterclockwise)
Preceding gene: 197116792
Following gene: 197116790
Centisome position: 10.19
GC content: 59.55
Gene sequence:
>984_bases TTGCGCAGAGTAGGCTTTACCACCACCATCCCGCTCGAGGTGCTGATCGCGGCGGGCGTGGTTCCCATCGACCTGAACAA CGTCTTCATCACCCACCATGACAACGCGTCGCTCATCGAAGATGCAGAACTCACCGGTTTCCCGAGGAATGTCTGCGCCT GGATCAAGGGGATCTACGGCGCCGTGGTGCAAAGCGGCGTCACCGAACTGATCGCCGTCACCGAGGGGGACTGCAGCTAC ACCAAGGCGCTCATGGAGGTGCTCTCCCTGAACGGGGTGCACGTCTACCCCTTCGCCTATCCTGCCGGGCGCGAGGCTGT GCCGCTCAAAAAAGAGATCGAAAAGCTGATGGGACAGTTCGGCGTCGACTGGGACCATGTGGGCGAGGCGAAAAAGCGCC TGGACCGGATCCGCGCCAAAGTCCACGAAATTGACCGCCTCTCCTGGCAGGAAGACAAGGTGACCGGGGAGGAGAACCAT TACTTCCAGGTCTGCACCTCGGACATGAACGGCGACCCGGACGCGTTCGAGGCCGAGGTCGACGCCTTCATCGCCGCCGC GGCCGTCCGTGCGCCGCGCCACGAGCGCTTAAGGCTCGCTTTCCTGGGGGTGCCGCCGATCATATCCGGACTTTACGGCT TTCTGGAGGAGGTAGGCGCCAGGGTAGTCTTCAACGAGACCCAGCGGCAGTTCTCCATGCCTTTCGGGATCGAGGACCTG GTGGAACAGTACCGAGCCTACAGCTATCCCTATGACATCTTCCATCGGCTCGCTGACATCTCGCGGGAGATAGAGAAGCG CCGCATCGACGGCGTCATCCATTATGTTCAGTCTTTCTGCTTCCGGCAGATAGAGGACATGGTTCTCAGAAAAAGCATCA AGCTTCCAATCATGACGCTCGAGGGTGACAAACCGGGCGCCATAGATGCCAGAACAAAGATCAGGGTGGAAGGATTTCTG GAACTGCTTGAGGATCGTGACTGA
Upstream 100 bases:
>100_bases GGACACCCTTTCGGTTTCCTCCACACTTCCCTTCGCATTCGGCGGCCTCGCCATAGGGGCGGTGCTCATCTACCTCAATT TCATCAAGACGGAGTAAGTT
Downstream 100 bases:
>100_bases GAGGAGGAGCCTCATCGTGTTGCAATCCTGTTCCGATACAGAGCCCATTTACTGACCCGTGACAAAATATACAATGCGAC CTTGATTTCGCAAGTGTAGT
Product: (R)-2-hydroxyglutaryl-CoA dehydratase D component-like protein
Products: NA
Alternate protein names: Benzoyl-CoA Reductase/2-Hydroxyglutaryl-CoA Dehydratase; 2-Hydroxyglutaryl-Coa Dehydratase Subunit; 2-Hydroxyglutaryl-CoA Dehydratase Subunit; 2-Hydroxyglutaryl-CoA Dehydratase Subunit D
Number of amino acids: Translated: 327; Mature: 327
Protein sequence:
>327_residues MRRVGFTTTIPLEVLIAAGVVPIDLNNVFITHHDNASLIEDAELTGFPRNVCAWIKGIYGAVVQSGVTELIAVTEGDCSY TKALMEVLSLNGVHVYPFAYPAGREAVPLKKEIEKLMGQFGVDWDHVGEAKKRLDRIRAKVHEIDRLSWQEDKVTGEENH YFQVCTSDMNGDPDAFEAEVDAFIAAAAVRAPRHERLRLAFLGVPPIISGLYGFLEEVGARVVFNETQRQFSMPFGIEDL VEQYRAYSYPYDIFHRLADISREIEKRRIDGVIHYVQSFCFRQIEDMVLRKSIKLPIMTLEGDKPGAIDARTKIRVEGFL ELLEDRD
Sequences:
>Translated_327_residues MRRVGFTTTIPLEVLIAAGVVPIDLNNVFITHHDNASLIEDAELTGFPRNVCAWIKGIYGAVVQSGVTELIAVTEGDCSY TKALMEVLSLNGVHVYPFAYPAGREAVPLKKEIEKLMGQFGVDWDHVGEAKKRLDRIRAKVHEIDRLSWQEDKVTGEENH YFQVCTSDMNGDPDAFEAEVDAFIAAAAVRAPRHERLRLAFLGVPPIISGLYGFLEEVGARVVFNETQRQFSMPFGIEDL VEQYRAYSYPYDIFHRLADISREIEKRRIDGVIHYVQSFCFRQIEDMVLRKSIKLPIMTLEGDKPGAIDARTKIRVEGFL ELLEDRD >Mature_327_residues MRRVGFTTTIPLEVLIAAGVVPIDLNNVFITHHDNASLIEDAELTGFPRNVCAWIKGIYGAVVQSGVTELIAVTEGDCSY TKALMEVLSLNGVHVYPFAYPAGREAVPLKKEIEKLMGQFGVDWDHVGEAKKRLDRIRAKVHEIDRLSWQEDKVTGEENH YFQVCTSDMNGDPDAFEAEVDAFIAAAAVRAPRHERLRLAFLGVPPIISGLYGFLEEVGARVVFNETQRQFSMPFGIEDL VEQYRAYSYPYDIFHRLADISREIEKRRIDGVIHYVQSFCFRQIEDMVLRKSIKLPIMTLEGDKPGAIDARTKIRVEGFL ELLEDRD
Specific function: Unknown
COG id: COG1775
COG function: function code E; Benzoyl-CoA reductase/2-hydroxyglutaryl-CoA dehydratase subunit, BcrC/BadD/HgdB
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 37020; Mature: 37020
Theoretical pI: Translated: 5.06; Mature: 5.06
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRRVGFTTTIPLEVLIAAGVVPIDLNNVFITHHDNASLIEDAELTGFPRNVCAWIKGIYG CCCCCCCCCHHHHHHHHCCCEEEECCCEEEEECCCCCHHCCCCCCCCCHHHHHHHHHHHH AVVQSGVTELIAVTEGDCSYTKALMEVLSLNGVHVYPFAYPAGREAVPLKKEIEKLMGQF HHHHHHHHHEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCHHHHHHHHHHHH GVDWDHVGEAKKRLDRIRAKVHEIDRLSWQEDKVTGEENHYFQVCTSDMNGDPDAFEAEV CCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEECCCCCCCCHHHHHH DAFIAAAAVRAPRHERLRLAFLGVPPIISGLYGFLEEVGARVVFNETQRQFSMPFGIEDL HHHHHHHHHHCCCHHCEEEEEECCCHHHHHHHHHHHHHCCEEEEEHHHHHHCCCCCHHHH VEQYRAYSYPYDIFHRLADISREIEKRRIDGVIHYVQSFCFRQIEDMVLRKSIKLPIMTL HHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEE EGDKPGAIDARTKIRVEGFLELLEDRD CCCCCCCCCCHHHHHHHHHHHHHHCCC >Mature Secondary Structure MRRVGFTTTIPLEVLIAAGVVPIDLNNVFITHHDNASLIEDAELTGFPRNVCAWIKGIYG CCCCCCCCCHHHHHHHHCCCEEEECCCEEEEECCCCCHHCCCCCCCCCHHHHHHHHHHHH AVVQSGVTELIAVTEGDCSYTKALMEVLSLNGVHVYPFAYPAGREAVPLKKEIEKLMGQF HHHHHHHHHEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCHHHHHHHHHHHH GVDWDHVGEAKKRLDRIRAKVHEIDRLSWQEDKVTGEENHYFQVCTSDMNGDPDAFEAEV CCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEECCCCCCCCHHHHHH DAFIAAAAVRAPRHERLRLAFLGVPPIISGLYGFLEEVGARVVFNETQRQFSMPFGIEDL HHHHHHHHHHCCCHHCEEEEEECCCHHHHHHHHHHHHHCCEEEEEHHHHHHCCCCCHHHH VEQYRAYSYPYDIFHRLADISREIEKRRIDGVIHYVQSFCFRQIEDMVLRKSIKLPIMTL HHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEE EGDKPGAIDARTKIRVEGFLELLEDRD CCCCCCCCCCHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA