Definition Geobacter bemidjiensis Bem chromosome, complete genome.
Accession NC_011146
Length 4,615,150

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The map label for this gene is 197116787

Identifier: 197116787

GI number: 197116787

Start: 466429

End: 467082

Strand: Reverse

Name: 197116787

Synonym: Gbem_0389

Alternate gene names: NA

Gene position: 467082-466429 (Counterclockwise)

Preceding gene: 197116788

Following gene: 197116784

Centisome position: 10.12

GC content: 57.34

Gene sequence:

>654_bases
ATGTTAAAGCTTGATTACACCATTGCGAGGAAATTCGAGGAACTGGCCGAAAAGGGGAAGAAGGTCAATTCATCCCAGCA
GATAAACGATATTGCCGCGGTCGTGGACTCCAAGCTGTTCCAGGATTGGGCCAATTCCGCCCTGAGCCTGCTGCAGCAGG
TTTTCGGCGAGGAAAGCGCCTACTACCGCAACTTCGAGGCGATCTACGCCAAAATCATCAACATCACCTACAAGGAAAGC
TTCGACAACTGCCGCGCCATCGTGCAGTCTGCGCGCACCGAATTCGAACGAGGCGGGCTCACCGAGGTCAAGCTGTTCCT
GGACCATGCCGTTCTGGAGTACCTCGGGGGGCGGACGCTCGATTTCCTGCGCAGGGGGGAACTGGCAACAGCCAGCATCT
TGGCCTCGGTCCTGCTGGAGCAGGCGTTGACGTTGATCTGCGGGAGTAATTCCATTCCTGCCGGGGACCTCTCCAAGATG
AACGAGGCCCTCTACCAGGCAAAGGTGTACCAGGTGGGAACCTACCAGCGGGTGAAGGACTGGTGCTACATGAAGGAAGA
CTTCATTGCCGGGGATGGCTCCAGGTACCGCACCGCCGACGTCGAGGATATGCTGCGCGGGGTGCAGAAGTTCATCGCCA
AGGAGATTGGGTAA

Upstream 100 bases:

>100_bases
CCCCCGCATAAGCATTCCCCTCAAGTACCGTCAAGGTTCAGCCGATACGGTGAAGTGACCCTAAAGGTCTCCGTACTCCA
AGACAAGGAGTAAACACCTC

Downstream 100 bases:

>100_bases
AGCAAAAGGCGAGATTGAGATTAAGATTGAGTTTAAAATCCGAGACTGTGAGTTCAGACCTTGGATTCAGACTCACATCT
AAATCAGAGACATCGGGTTG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 217; Mature: 217

Protein sequence:

>217_residues
MLKLDYTIARKFEELAEKGKKVNSSQQINDIAAVVDSKLFQDWANSALSLLQQVFGEESAYYRNFEAIYAKIINITYKES
FDNCRAIVQSARTEFERGGLTEVKLFLDHAVLEYLGGRTLDFLRRGELATASILASVLLEQALTLICGSNSIPAGDLSKM
NEALYQAKVYQVGTYQRVKDWCYMKEDFIAGDGSRYRTADVEDMLRGVQKFIAKEIG

Sequences:

>Translated_217_residues
MLKLDYTIARKFEELAEKGKKVNSSQQINDIAAVVDSKLFQDWANSALSLLQQVFGEESAYYRNFEAIYAKIINITYKES
FDNCRAIVQSARTEFERGGLTEVKLFLDHAVLEYLGGRTLDFLRRGELATASILASVLLEQALTLICGSNSIPAGDLSKM
NEALYQAKVYQVGTYQRVKDWCYMKEDFIAGDGSRYRTADVEDMLRGVQKFIAKEIG
>Mature_217_residues
MLKLDYTIARKFEELAEKGKKVNSSQQINDIAAVVDSKLFQDWANSALSLLQQVFGEESAYYRNFEAIYAKIINITYKES
FDNCRAIVQSARTEFERGGLTEVKLFLDHAVLEYLGGRTLDFLRRGELATASILASVLLEQALTLICGSNSIPAGDLSKM
NEALYQAKVYQVGTYQRVKDWCYMKEDFIAGDGSRYRTADVEDMLRGVQKFIAKEIG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 24503; Mature: 24503

Theoretical pI: Translated: 5.16; Mature: 5.16

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLKLDYTIARKFEELAEKGKKVNSSQQINDIAAVVDSKLFQDWANSALSLLQQVFGEESA
CCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHH
YYRNFEAIYAKIINITYKESFDNCRAIVQSARTEFERGGLTEVKLFLDHAVLEYLGGRTL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCHH
DFLRRGELATASILASVLLEQALTLICGSNSIPAGDLSKMNEALYQAKVYQVGTYQRVKD
HHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHH
WCYMKEDFIAGDGSRYRTADVEDMLRGVQKFIAKEIG
HHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MLKLDYTIARKFEELAEKGKKVNSSQQINDIAAVVDSKLFQDWANSALSLLQQVFGEESA
CCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHH
YYRNFEAIYAKIINITYKESFDNCRAIVQSARTEFERGGLTEVKLFLDHAVLEYLGGRTL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCHH
DFLRRGELATASILASVLLEQALTLICGSNSIPAGDLSKMNEALYQAKVYQVGTYQRVKD
HHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHH
WCYMKEDFIAGDGSRYRTADVEDMLRGVQKFIAKEIG
HHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA