Definition Geobacter bemidjiensis Bem chromosome, complete genome.
Accession NC_011146
Length 4,615,150

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The map label for this gene is 197116780

Identifier: 197116780

GI number: 197116780

Start: 458805

End: 459440

Strand: Reverse

Name: 197116780

Synonym: Gbem_0382

Alternate gene names: NA

Gene position: 459440-458805 (Counterclockwise)

Preceding gene: 197116783

Following gene: 197116778

Centisome position: 9.96

GC content: 54.4

Gene sequence:

>636_bases
ATGAAAACGCGTATAACCAACATGCTGCGCCTGTCGTTCGCTGCAGTGTCTGCACTGGCCATACTCTGGACAGCCGTTCC
CGCAGGTGCGACCTTTGTCGTGGATCCCAATCCCGGTGGCATCAGCTTTTACCTAAACAACGAAATGATCAGCCCCAACC
ACTTCACAGGCAATGTCGGCGGCAATGACATTAGCTACCCCGCCATTGACGTGGTTACCATGGGAGCCGTCACTGTCGCC
AGTGGCTACGCTAACATCAAGCAGTCCGGGACCGATTTGCTAACCTCCCTCACCTTTACCCCTCTTGGCGAAGAGAAATA
TGGAGACTTCTCTTTCCGGGGCCAGCTTGTGTCAGCCGGGACAATCCAAGTCAACGTCACCAACCAAAACGGTGTTAACA
CCGGCCTCACCTTCGACATCGACCAAGCCAGGCGGAACTTCGAGCGGATAGGCATAGTGTCTCCCGACGGCGACTGGATC
GACGCGGTCAATATTTCCTTCGCCGAGGGATTCGAACAAGTCAAACAAATCGATTTTTCCCCGCAGGCTGCTCCCATTCC
AGAACCTTCCACCTTCATCCTGCTCGCTTTCGGGCTGGCAGGAGTTGGCTTGTTGAGAAAAAGAAGCAAAGCCTGA

Upstream 100 bases:

>100_bases
AGGCCGGTAGGTGACCATCCAGGCGCCCAAAGTTGCCGTTGGATTCCTGGAACAAACCAAATGTCCTTAAGAGGACGCCG
CAAGACGAAGGAGAAAGGTT

Downstream 100 bases:

>100_bases
TCAACAGCTGACCGACCGACACCTCACCTAGGCCTCCGCAAGGAGGCCTTTTTTTGCCCTCGCTTGGAATCTCCTCAAAA
AAAAGGCGGTCCAGGACCGC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 211; Mature: 211

Protein sequence:

>211_residues
MKTRITNMLRLSFAAVSALAILWTAVPAGATFVVDPNPGGISFYLNNEMISPNHFTGNVGGNDISYPAIDVVTMGAVTVA
SGYANIKQSGTDLLTSLTFTPLGEEKYGDFSFRGQLVSAGTIQVNVTNQNGVNTGLTFDIDQARRNFERIGIVSPDGDWI
DAVNISFAEGFEQVKQIDFSPQAAPIPEPSTFILLAFGLAGVGLLRKRSKA

Sequences:

>Translated_211_residues
MKTRITNMLRLSFAAVSALAILWTAVPAGATFVVDPNPGGISFYLNNEMISPNHFTGNVGGNDISYPAIDVVTMGAVTVA
SGYANIKQSGTDLLTSLTFTPLGEEKYGDFSFRGQLVSAGTIQVNVTNQNGVNTGLTFDIDQARRNFERIGIVSPDGDWI
DAVNISFAEGFEQVKQIDFSPQAAPIPEPSTFILLAFGLAGVGLLRKRSKA
>Mature_211_residues
MKTRITNMLRLSFAAVSALAILWTAVPAGATFVVDPNPGGISFYLNNEMISPNHFTGNVGGNDISYPAIDVVTMGAVTVA
SGYANIKQSGTDLLTSLTFTPLGEEKYGDFSFRGQLVSAGTIQVNVTNQNGVNTGLTFDIDQARRNFERIGIVSPDGDWI
DAVNISFAEGFEQVKQIDFSPQAAPIPEPSTFILLAFGLAGVGLLRKRSKA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 22495; Mature: 22495

Theoretical pI: Translated: 4.69; Mature: 4.69

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKTRITNMLRLSFAAVSALAILWTAVPAGATFVVDPNPGGISFYLNNEMISPNHFTGNVG
CCCHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCEEEEECCCEECCCCEECCCC
GNDISYPAIDVVTMGAVTVASGYANIKQSGTDLLTSLTFTPLGEEKYGDFSFRGQLVSAG
CCCCCCCEEEEEECCHHEECCCCHHHHHCCHHHHHHEECCCCCCCCCCCEEECCEEEECC
TIQVNVTNQNGVNTGLTFDIDQARRNFERIGIVSPDGDWIDAVNISFAEGFEQVKQIDFS
EEEEEEECCCCCCCCEEEEHHHHHCCHHHEEEECCCCCEEEEEECHHHHHHHHHHHCCCC
PQAAPIPEPSTFILLAFGLAGVGLLRKRSKA
CCCCCCCCCCCEEEEEHHHHHHHHHHHCCCC
>Mature Secondary Structure
MKTRITNMLRLSFAAVSALAILWTAVPAGATFVVDPNPGGISFYLNNEMISPNHFTGNVG
CCCHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCEEEEECCCEECCCCEECCCC
GNDISYPAIDVVTMGAVTVASGYANIKQSGTDLLTSLTFTPLGEEKYGDFSFRGQLVSAG
CCCCCCCEEEEEECCHHEECCCCHHHHHCCHHHHHHEECCCCCCCCCCCEEECCEEEECC
TIQVNVTNQNGVNTGLTFDIDQARRNFERIGIVSPDGDWIDAVNISFAEGFEQVKQIDFS
EEEEEEECCCCCCCCEEEEHHHHHCCHHHEEEECCCCCEEEEEECHHHHHHHHHHHCCCC
PQAAPIPEPSTFILLAFGLAGVGLLRKRSKA
CCCCCCCCCCCEEEEEHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA