| Definition | Geobacter bemidjiensis Bem chromosome, complete genome. |
|---|---|
| Accession | NC_011146 |
| Length | 4,615,150 |
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The map label for this gene is 197116780
Identifier: 197116780
GI number: 197116780
Start: 458805
End: 459440
Strand: Reverse
Name: 197116780
Synonym: Gbem_0382
Alternate gene names: NA
Gene position: 459440-458805 (Counterclockwise)
Preceding gene: 197116783
Following gene: 197116778
Centisome position: 9.96
GC content: 54.4
Gene sequence:
>636_bases ATGAAAACGCGTATAACCAACATGCTGCGCCTGTCGTTCGCTGCAGTGTCTGCACTGGCCATACTCTGGACAGCCGTTCC CGCAGGTGCGACCTTTGTCGTGGATCCCAATCCCGGTGGCATCAGCTTTTACCTAAACAACGAAATGATCAGCCCCAACC ACTTCACAGGCAATGTCGGCGGCAATGACATTAGCTACCCCGCCATTGACGTGGTTACCATGGGAGCCGTCACTGTCGCC AGTGGCTACGCTAACATCAAGCAGTCCGGGACCGATTTGCTAACCTCCCTCACCTTTACCCCTCTTGGCGAAGAGAAATA TGGAGACTTCTCTTTCCGGGGCCAGCTTGTGTCAGCCGGGACAATCCAAGTCAACGTCACCAACCAAAACGGTGTTAACA CCGGCCTCACCTTCGACATCGACCAAGCCAGGCGGAACTTCGAGCGGATAGGCATAGTGTCTCCCGACGGCGACTGGATC GACGCGGTCAATATTTCCTTCGCCGAGGGATTCGAACAAGTCAAACAAATCGATTTTTCCCCGCAGGCTGCTCCCATTCC AGAACCTTCCACCTTCATCCTGCTCGCTTTCGGGCTGGCAGGAGTTGGCTTGTTGAGAAAAAGAAGCAAAGCCTGA
Upstream 100 bases:
>100_bases AGGCCGGTAGGTGACCATCCAGGCGCCCAAAGTTGCCGTTGGATTCCTGGAACAAACCAAATGTCCTTAAGAGGACGCCG CAAGACGAAGGAGAAAGGTT
Downstream 100 bases:
>100_bases TCAACAGCTGACCGACCGACACCTCACCTAGGCCTCCGCAAGGAGGCCTTTTTTTGCCCTCGCTTGGAATCTCCTCAAAA AAAAGGCGGTCCAGGACCGC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 211; Mature: 211
Protein sequence:
>211_residues MKTRITNMLRLSFAAVSALAILWTAVPAGATFVVDPNPGGISFYLNNEMISPNHFTGNVGGNDISYPAIDVVTMGAVTVA SGYANIKQSGTDLLTSLTFTPLGEEKYGDFSFRGQLVSAGTIQVNVTNQNGVNTGLTFDIDQARRNFERIGIVSPDGDWI DAVNISFAEGFEQVKQIDFSPQAAPIPEPSTFILLAFGLAGVGLLRKRSKA
Sequences:
>Translated_211_residues MKTRITNMLRLSFAAVSALAILWTAVPAGATFVVDPNPGGISFYLNNEMISPNHFTGNVGGNDISYPAIDVVTMGAVTVA SGYANIKQSGTDLLTSLTFTPLGEEKYGDFSFRGQLVSAGTIQVNVTNQNGVNTGLTFDIDQARRNFERIGIVSPDGDWI DAVNISFAEGFEQVKQIDFSPQAAPIPEPSTFILLAFGLAGVGLLRKRSKA >Mature_211_residues MKTRITNMLRLSFAAVSALAILWTAVPAGATFVVDPNPGGISFYLNNEMISPNHFTGNVGGNDISYPAIDVVTMGAVTVA SGYANIKQSGTDLLTSLTFTPLGEEKYGDFSFRGQLVSAGTIQVNVTNQNGVNTGLTFDIDQARRNFERIGIVSPDGDWI DAVNISFAEGFEQVKQIDFSPQAAPIPEPSTFILLAFGLAGVGLLRKRSKA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 22495; Mature: 22495
Theoretical pI: Translated: 4.69; Mature: 4.69
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKTRITNMLRLSFAAVSALAILWTAVPAGATFVVDPNPGGISFYLNNEMISPNHFTGNVG CCCHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCEEEEECCCEECCCCEECCCC GNDISYPAIDVVTMGAVTVASGYANIKQSGTDLLTSLTFTPLGEEKYGDFSFRGQLVSAG CCCCCCCEEEEEECCHHEECCCCHHHHHCCHHHHHHEECCCCCCCCCCCEEECCEEEECC TIQVNVTNQNGVNTGLTFDIDQARRNFERIGIVSPDGDWIDAVNISFAEGFEQVKQIDFS EEEEEEECCCCCCCCEEEEHHHHHCCHHHEEEECCCCCEEEEEECHHHHHHHHHHHCCCC PQAAPIPEPSTFILLAFGLAGVGLLRKRSKA CCCCCCCCCCCEEEEEHHHHHHHHHHHCCCC >Mature Secondary Structure MKTRITNMLRLSFAAVSALAILWTAVPAGATFVVDPNPGGISFYLNNEMISPNHFTGNVG CCCHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCEEEEECCCEECCCCEECCCC GNDISYPAIDVVTMGAVTVASGYANIKQSGTDLLTSLTFTPLGEEKYGDFSFRGQLVSAG CCCCCCCEEEEEECCHHEECCCCHHHHHCCHHHHHHEECCCCCCCCCCCEEECCEEEECC TIQVNVTNQNGVNTGLTFDIDQARRNFERIGIVSPDGDWIDAVNISFAEGFEQVKQIDFS EEEEEEECCCCCCCCEEEEHHHHHCCHHHEEEECCCCCEEEEEECHHHHHHHHHHHCCCC PQAAPIPEPSTFILLAFGLAGVGLLRKRSKA CCCCCCCCCCCEEEEEHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA