| Definition | Phenylobacterium zucineum HLK1, complete genome. |
|---|---|
| Accession | NC_011144 |
| Length | 3,996,255 |
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The map label for this gene is 197104452
Identifier: 197104452
GI number: 197104452
Start: 1093365
End: 1094294
Strand: Direct
Name: 197104452
Synonym: PHZ_c0986
Alternate gene names: NA
Gene position: 1093365-1094294 (Clockwise)
Preceding gene: 197104451
Following gene: 197104453
Centisome position: 27.36
GC content: 72.04
Gene sequence:
>930_bases TTGTTTCAGACTCAGTCGGACCACGCGCTTCTCGCCCTCCTCGGGGCTCTGGACCAGAGGGGCTACGACTTCGTCACGCC CCTCAACCCGACCTCCTGGCGGACACATCGCCGTCGCCGGCCTCTAGGCGAGCGCAACCTTCGGGACGTGCTGGGATGGG GGCTGCCCTTCCCGAGCGGCGCCATCGACGGCGAGATCGAGGCTCTGCTGGCGGAGGCCGGGGCGCTGCGTGAGGAAGAG GGCGGCTATCGCTCCACCCTTCGCGTATCGCGGCTCGCCGGGACGCTCTTCCTCCACTCGGCCCTCGGTTCGCGCGAGCC CGGCAAGGTGTTCCTCGGTCCCGACAGCTACCGATTCGCGGAATTCCTGCGCGTGGAGCTGACCGGCAAGGCCGCGGCGC GGAAGGTGGTCGAAATCGGCGCGGGGGCCGGGGTCGGCGGAGTGGTCGCGGCCCGGCTCGGCGGTGCGGAGCTGGTCCAG CTCGGCGACGTGAACGAGTGCGCCCTGCGCCTGGCGCGGATCAACGCCGCGCACGCCGGCGTCACCGCCGCCGCCGTGCG GTCCGACGGCCTCTCCGACTTGGACCCCGACGCGGACCTCGTCGTCGCCAATCCGCCCTTCATCGCGGCGAGCGGACTCA CCCACAGCGATGGCGGCGACCGGCATGGCACGGCCATCGCGCTTCGGTGGGCGGACGAGGCCATGAGCCGCCTGCCGCCG GGCGGACGCCTGCTGCTCTACACCGGTGCGCCCATGGTGGAGGGAACGGACATCCTGCTGGCCGGCCTGCGCAGGCACGC GCGCGAGCGGGCCTGCCGGCTGGGCTACCGCGAACTCGATCCGGACATCTTCGCCTCCGAGCTGCGCCGCGAGGTCTATG CGGACGTGGAGCGGATCGCAGCCGTCGGCGCTGTCGTGGAGAAGCTCTGA
Upstream 100 bases:
>100_bases CGCCCCCCAGGCGTCCTTTTTCGTTCCCGGCCATGCGCGAGCCGCGGGTGCAGCGAAAGCCCAGCTTGCGCGTTCCAGCC CGGCACAACCGGGCGGACCC
Downstream 100 bases:
>100_bases CGCGAAGAAGCTCTGAGCGCGGATCTGCGCCGGTTCCCACGCTTTCCCTTCACCCCCGTCTTCGCGTAAACGGACGCGGC CCCCACATGAGGGGGCCGAA
Product: DNA methylase
Products: NA
Alternate protein names: HemK Family Methylase; DNA Methylase; Methyltransferase
Number of amino acids: Translated: 309; Mature: 309
Protein sequence:
>309_residues MFQTQSDHALLALLGALDQRGYDFVTPLNPTSWRTHRRRRPLGERNLRDVLGWGLPFPSGAIDGEIEALLAEAGALREEE GGYRSTLRVSRLAGTLFLHSALGSREPGKVFLGPDSYRFAEFLRVELTGKAAARKVVEIGAGAGVGGVVAARLGGAELVQ LGDVNECALRLARINAAHAGVTAAAVRSDGLSDLDPDADLVVANPPFIAASGLTHSDGGDRHGTAIALRWADEAMSRLPP GGRLLLYTGAPMVEGTDILLAGLRRHARERACRLGYRELDPDIFASELRREVYADVERIAAVGAVVEKL
Sequences:
>Translated_309_residues MFQTQSDHALLALLGALDQRGYDFVTPLNPTSWRTHRRRRPLGERNLRDVLGWGLPFPSGAIDGEIEALLAEAGALREEE GGYRSTLRVSRLAGTLFLHSALGSREPGKVFLGPDSYRFAEFLRVELTGKAAARKVVEIGAGAGVGGVVAARLGGAELVQ LGDVNECALRLARINAAHAGVTAAAVRSDGLSDLDPDADLVVANPPFIAASGLTHSDGGDRHGTAIALRWADEAMSRLPP GGRLLLYTGAPMVEGTDILLAGLRRHARERACRLGYRELDPDIFASELRREVYADVERIAAVGAVVEKL >Mature_309_residues MFQTQSDHALLALLGALDQRGYDFVTPLNPTSWRTHRRRRPLGERNLRDVLGWGLPFPSGAIDGEIEALLAEAGALREEE GGYRSTLRVSRLAGTLFLHSALGSREPGKVFLGPDSYRFAEFLRVELTGKAAARKVVEIGAGAGVGGVVAARLGGAELVQ LGDVNECALRLARINAAHAGVTAAAVRSDGLSDLDPDADLVVANPPFIAASGLTHSDGGDRHGTAIALRWADEAMSRLPP GGRLLLYTGAPMVEGTDILLAGLRRHARERACRLGYRELDPDIFASELRREVYADVERIAAVGAVVEKL
Specific function: Unknown
COG id: COG2890
COG function: function code J; Methylase of polypeptide chain release factors
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 33014; Mature: 33014
Theoretical pI: Translated: 6.64; Mature: 6.64
Prosite motif: PS00092 N6_MTASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 1.6 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFQTQSDHALLALLGALDQRGYDFVTPLNPTSWRTHRRRRPLGERNLRDVLGWGLPFPSG CCCCCCCHHHHHHHHHHHHCCCEEECCCCCCCHHHHHHHCCCCCHHHHHHHHCCCCCCCC AIDGEIEALLAEAGALREEEGGYRSTLRVSRLAGTLFLHSALGSREPGKVFLGPDSYRFA CCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCHHHH EFLRVELTGKAAARKVVEIGAGAGVGGVVAARLGGAELVQLGDVNECALRLARINAAHAG HHHEEEECCHHHHHHHHHHCCCCCHHHHHHHHCCCCCEEEECCHHHHHHHHHHHHHHHCC VTAAAVRSDGLSDLDPDADLVVANPPFIAASGLTHSDGGDRHGTAIALRWADEAMSRLPP HHHHHHHCCCCCCCCCCCCEEEECCCEEEECCCCCCCCCCCCCCEEEEEEHHHHHHHCCC GGRLLLYTGAPMVEGTDILLAGLRRHARERACRLGYRELDPDIFASELRREVYADVERIA CCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHCCCHHCCHHHHHHHHHHHHHHHHHHHH AVGAVVEKL HHHHHHHCC >Mature Secondary Structure MFQTQSDHALLALLGALDQRGYDFVTPLNPTSWRTHRRRRPLGERNLRDVLGWGLPFPSG CCCCCCCHHHHHHHHHHHHCCCEEECCCCCCCHHHHHHHCCCCCHHHHHHHHCCCCCCCC AIDGEIEALLAEAGALREEEGGYRSTLRVSRLAGTLFLHSALGSREPGKVFLGPDSYRFA CCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCHHHH EFLRVELTGKAAARKVVEIGAGAGVGGVVAARLGGAELVQLGDVNECALRLARINAAHAG HHHEEEECCHHHHHHHHHHCCCCCHHHHHHHHCCCCCEEEECCHHHHHHHHHHHHHHHCC VTAAAVRSDGLSDLDPDADLVVANPPFIAASGLTHSDGGDRHGTAIALRWADEAMSRLPP HHHHHHHCCCCCCCCCCCCEEEECCCEEEECCCCCCCCCCCCCCEEEEEEHHHHHHHCCC GGRLLLYTGAPMVEGTDILLAGLRRHARERACRLGYRELDPDIFASELRREVYADVERIA CCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHCCCHHCCHHHHHHHHHHHHHHHHHHHH AVGAVVEKL HHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA