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The map label for this gene is ybiH [C]

Identifier: 197104442

GI number: 197104442

Start: 1078398

End: 1078973

Strand: Direct

Name: ybiH [C]

Synonym: PHZ_c0976

Alternate gene names: 197104442

Gene position: 1078398-1078973 (Clockwise)

Preceding gene: 197104438

Following gene: 197104443

Centisome position: 26.99

GC content: 73.09

Gene sequence:

>576_bases
ATGAGCCAGCCGGAATGCACGCCGCGGTCGCGCAACGCGGCGGCCACGCGCGCGGCGATCCTGGCGGCGGCCCGGGCCCG
GTTCGCCGAGGAGGGCTATGACGTGGCCAGCATCCGCGGCATCGCCGGCGAGGCCGGCATCGACCCGGCCCTGGTGCTGC
GCTACTTCGGCTCGAAGGAGGATCTCCTGGCCGAGGTGCTGGCCGACAGCGGCTCGGTGCGCGATCTGCTCGAGGGGCCG
CGGGAGGAATTCGGCGCCCGCGCGGCCCGCATGCTGCTGCTCGAGCCCATGGCCGACCACAAGCTGGCCGTGCTGCAGAT
CATCCTGCGCTCGGCCTCCTCGCCGAAGGCCGGCCCCATGATCCGGCGCAACACCCAGGTCGCCTTCTACGAACCCATGG
AGGAATGGCTGGGCGGCGAGGACGCGCCGATCCGAGCCCGCACCCTGGGCGCGATCATCATGGGCGCGGCGATGTCACGG
GCGATCGACAACAACGGCCTGGACGATCCCGCCGACCGCGAGCGGCTGTGCCAGCGCCTGGCCGAGGCGCTCCAGCAGGC
GGTGGAGCGGCCCTGA

Upstream 100 bases:

>100_bases
CGCGCGGGGAGGCGCGCGCGGCATCAAGTCAACGTGTGATGACTTATTGACTCGGACCGGCAACAAGTCAACGGTTGTTG
ACAACCATGGAGGATTTTTC

Downstream 100 bases:

>100_bases
GGCGATGGGATGGCCATTGTGATCTGACGCTGTGACCTGCCCCCTTCCTGATCCCTCGGTTTGAGTGAGAGTCCGTCACC
CTGAGGAGACGGACGTGAAG

Product: transcriptional regulator, TetR family

Products: NA

Alternate protein names: Transcriptional Regulator TetR Family; Transcriptional Regulator; Regulatory Protein TetR

Number of amino acids: Translated: 191; Mature: 190

Protein sequence:

>191_residues
MSQPECTPRSRNAAATRAAILAAARARFAEEGYDVASIRGIAGEAGIDPALVLRYFGSKEDLLAEVLADSGSVRDLLEGP
REEFGARAARMLLLEPMADHKLAVLQIILRSASSPKAGPMIRRNTQVAFYEPMEEWLGGEDAPIRARTLGAIIMGAAMSR
AIDNNGLDDPADRERLCQRLAEALQQAVERP

Sequences:

>Translated_191_residues
MSQPECTPRSRNAAATRAAILAAARARFAEEGYDVASIRGIAGEAGIDPALVLRYFGSKEDLLAEVLADSGSVRDLLEGP
REEFGARAARMLLLEPMADHKLAVLQIILRSASSPKAGPMIRRNTQVAFYEPMEEWLGGEDAPIRARTLGAIIMGAAMSR
AIDNNGLDDPADRERLCQRLAEALQQAVERP
>Mature_190_residues
SQPECTPRSRNAAATRAAILAAARARFAEEGYDVASIRGIAGEAGIDPALVLRYFGSKEDLLAEVLADSGSVRDLLEGPR
EEFGARAARMLLLEPMADHKLAVLQIILRSASSPKAGPMIRRNTQVAFYEPMEEWLGGEDAPIRARTLGAIIMGAAMSRA
IDNNGLDDPADRERLCQRLAEALQQAVERP

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 20656; Mature: 20525

Theoretical pI: Translated: 4.95; Mature: 4.95

Prosite motif: PS50977 HTH_TETR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSQPECTPRSRNAAATRAAILAAARARFAEEGYDVASIRGIAGEAGIDPALVLRYFGSKE
CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHCCCCCCCCCHHHHHHHHCCHH
DLLAEVLADSGSVRDLLEGPREEFGARAARMLLLEPMADHKLAVLQIILRSASSPKAGPM
HHHHHHHHCCCCHHHHHCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCCCC
IRRNTQVAFYEPMEEWLGGEDAPIRARTLGAIIMGAAMSRAIDNNGLDDPADRERLCQRL
EECCCCEEEECCHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHH
AEALQQAVERP
HHHHHHHHCCC
>Mature Secondary Structure 
SQPECTPRSRNAAATRAAILAAARARFAEEGYDVASIRGIAGEAGIDPALVLRYFGSKE
CCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHCCCCCCCCCHHHHHHHHCCHH
DLLAEVLADSGSVRDLLEGPREEFGARAARMLLLEPMADHKLAVLQIILRSASSPKAGPM
HHHHHHHHCCCCHHHHHCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCCCC
IRRNTQVAFYEPMEEWLGGEDAPIRARTLGAIIMGAAMSRAIDNNGLDDPADRERLCQRL
EECCCCEEEECCHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHH
AEALQQAVERP
HHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA