| Definition | Phenylobacterium zucineum HLK1, complete genome. |
|---|---|
| Accession | NC_011144 |
| Length | 3,996,255 |
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The map label for this gene is nasA [H]
Identifier: 197104437
GI number: 197104437
Start: 1069135
End: 1071777
Strand: Direct
Name: nasA [H]
Synonym: PHZ_c0971
Alternate gene names: 197104437
Gene position: 1069135-1071777 (Clockwise)
Preceding gene: 197104436
Following gene: 197104438
Centisome position: 26.75
GC content: 76.01
Gene sequence:
>2643_bases GTGAGGACGACCTGCCCCTACTGCGGCGTCGGGTGCGGGATCTCGGCTGAGGCCGAGGGCCGAGCGCTGTCGGTGGCGGG CGATCCGGCGCATCCGGCCAACCTCGGGCGGCTGTGCTCGAAGGGGAGCGCCCTGGGGGCCACGGTCGGCCTGGAGGGGC GGCTGCTGCATCCGACGATCGGCGATCGCCCCGCGACTTGGGCCGAGGCGACCGGGCTGGTCGCGCGCCGGTTACGGGAG GCCATCGCCCGCCACGGGCCGGACTCGGTCGCCTTCTACGTCTCGGGCCAGCTGCTGACCGAGGACTACTACGCCGCCAA CAAGCTGATGAAGGGCTTCATCGGCTCGGCCAACATCGACACCAACTCGCGGCTGTGCATGGCCTCGGCGGTTGTGGCCC ACAAGCTCGCCTTCGGCGCCGACCTCGTCCCGGGCTGCTACGAGGACCTGGACCTGGCCGACCTCGTGGTCCTGTCCGGA CACAACGCCGCCTGGACCCACCCCGTGCTCTTCCGCCGCCTGGAAGCCGCCCGCGCCCGCGGCCAGCGCCATGTGGTGAT CGACCCGCGCCGCACCGACACGGCCGAAGCCGCCGACCTGCACCTGCCCATCGCCCCGCAGACCGACGTGAGGCTGTGGA ACGGCCTGCTGGCCGACCTCATCCGGCGGGGCGCGATCGACCTGGCGTTCCTCTCGGCCCACGTCGGGGGCTTCGCCGAG ACCGAGGCCGAGCTCGCACGCGCCGACCAGTCGCCCGCCGCCGTCGCCGCCGACTGCGGCGTGCCGCTCGCCGACCTCGA GCGCTTCTTCCGCTGGTTCGCCGCCACGCCGCGGACCGTCAGCCTCTTCTCCATGGGGGCCAACCAGTCGGCGCAGGGCG TGGCCAAGGGCCTGGCCATCCTGAACGTCCACCTCGCCACCGGCCGCATCGGCAAGCCCGGGGCCTGCCCGTTCTCGATC ACCGGCCAGCCCAACGCCATGGGCGGGCGCGAGACCGGCGGCATGGCCACCACGCTGGCCGCCCACATGGATTTCGAAGA GGCCGCCCGCGCCCGGGTCCGGCGCTTCTGGGGCGCGCCGACGATCGCCGAGCGGCCCGGCCTGAGGGCCGTCGAGATGT TCGAGGCGGTGCGCGAGGGCCGCATCAAGGCGCTGTGGATCATGGCCACCAATCCGGCGGTCAGCCTCCCCGACGCCGGC CGCGTCCGCGAGGCGCTCGCCGCCTGTCCGTTCGTCGTGGTGTCCGACGTCATGGCCGCGACCGACACCTCGGCCTTCGC CCACGTGCGCCTGCCCGCCCTGGCCTGGGGCGAGAAGGACGGGACCGTCACCAACTCCGAGCGCCGCATCTCGCGCCAGC GGCCGCTGCTTCCCCCGCCCGGCGAGGCGCGCGCGGACTGGCGGATCGTCGCCGACGTGGCGACGGCCATGGGCTTCGGC GAGGCCTTCGGCTGGCGCACGCCGGCGCAGGTGTTCCGCGAATGGGCGCGGCTGACCGCCTACGACAATCCGGACCGGGT GCTGAACCTCGGCCCGCTCGCCGCCCTCACGCCCGAGGCCTACGACGCCCTGGAGCCGGTCCAGTGGCCGGTGACGGCCG CCGGGGGCGCGCCGCGCCTGTTCACGGACGGGCGGTTCCAGACGCCTGACGGGCGGGGGCGCATGCATCCGGTGGCGGCC GAGGGGCCGGCCGAGCCGGTGGATCCCGGCTATCCGCTGGCGCTCAACACCGGCCGGGTCCGCGACCACTGGCATACGCT CACCCGCACCGGGCTGGCCCCCGAGCTGTGCCGCCATGCGCCCGAGCCCTATGTGGAGATCCACCCCGCCGACGCCGCGC CCCTGGGGATCGCCGAGGGCGCGCTGACCCGGATCGTCACCCGGCAGGGCGAGGCCGTGGCGACCGCCCGCCTTTCCGAT CGCCAGCGGCCGGGCTCGGTCTTCCTGCCGATGCACTGGACGCAGGCCTTCGCCCCGGCCGGCCGCGCCAACCCGCTGGT CGCGGCGCGCACCGATCCCCGCTCGGGCCAGCCCGAGTTCAAGCACACGCCGGCCCGCGTGCGGCCCTATCGCGAGACCT GGCGCGGCTTCCTGCTCGCCCCAGCGGCCGTCGAGCCGCCGCGAGGCTGCGACCTGGTCTGGCGGCGCATCCCACAGCCG GCCTGCCAGCTGCACGAGTTCGCCGGCCGGGGGGACGGCGCCGAGCGCGAAGCGGTGCGCCGGGCGCTGGCCCGCGGCGC GCCGGCCGAGGTGCTGCGCTTCGAGGACCCGGCCGCCGGCGTCCTGCGCGAGGCCTTCCTGGCGGAGGGGCGGCTCGAGC GGGTGCTGTTCCTGGCGGCGGCCGGCGAGCTGCCGCCCCGGGACTGGCTGGCGGAGCTGTTCGCCGGCGGCGTGCTCGAC CCCCTCCAGCGGGCGGCCCTGCTGGTCGGCCGCGCGCCCGGCCGCGCGGTGGAGGCCGGCCCCGTGGTCTGCGCCTGCCG CGGCGTGCGCCAGCCGCGCATCGAGGCCGCCATCGCCGACGGGGCCCGCGACCTCGACGCCGTGGCCGGGGCGACCGGAG CCGGCGCGTCCTGCGGCTCGTGCCGGCCCGAGATCGCCCGTCTCCTTTCCGCAACCAGTCCGCAGGTGCGCCATGCCGCC TGA
Upstream 100 bases:
>100_bases ACCTGGCCACCGGCGAGCCGCTGGGGGCCGACCGCGGCAAGGGCTGCGCGCCGGTGGCGCGGGTCCGGGTGGAGGGCGGT CGCGTCCTCGTGGGGCGGGT
Downstream 100 bases:
>100_bases TCCCGTTCCCGGCCGCGTCCGCCTAGTGGGCGCCGGCCCCGGCGCCGCCGACCTCCTGACCGTGCGCGCCCTGCGGGCGG TGCAGTCGGCGCAGGCCCTG
Product: nitrate reductase catalytic subunit
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 880; Mature: 880
Protein sequence:
>880_residues MRTTCPYCGVGCGISAEAEGRALSVAGDPAHPANLGRLCSKGSALGATVGLEGRLLHPTIGDRPATWAEATGLVARRLRE AIARHGPDSVAFYVSGQLLTEDYYAANKLMKGFIGSANIDTNSRLCMASAVVAHKLAFGADLVPGCYEDLDLADLVVLSG HNAAWTHPVLFRRLEAARARGQRHVVIDPRRTDTAEAADLHLPIAPQTDVRLWNGLLADLIRRGAIDLAFLSAHVGGFAE TEAELARADQSPAAVAADCGVPLADLERFFRWFAATPRTVSLFSMGANQSAQGVAKGLAILNVHLATGRIGKPGACPFSI TGQPNAMGGRETGGMATTLAAHMDFEEAARARVRRFWGAPTIAERPGLRAVEMFEAVREGRIKALWIMATNPAVSLPDAG RVREALAACPFVVVSDVMAATDTSAFAHVRLPALAWGEKDGTVTNSERRISRQRPLLPPPGEARADWRIVADVATAMGFG EAFGWRTPAQVFREWARLTAYDNPDRVLNLGPLAALTPEAYDALEPVQWPVTAAGGAPRLFTDGRFQTPDGRGRMHPVAA EGPAEPVDPGYPLALNTGRVRDHWHTLTRTGLAPELCRHAPEPYVEIHPADAAPLGIAEGALTRIVTRQGEAVATARLSD RQRPGSVFLPMHWTQAFAPAGRANPLVAARTDPRSGQPEFKHTPARVRPYRETWRGFLLAPAAVEPPRGCDLVWRRIPQP ACQLHEFAGRGDGAEREAVRRALARGAPAEVLRFEDPAAGVLREAFLAEGRLERVLFLAAAGELPPRDWLAELFAGGVLD PLQRAALLVGRAPGRAVEAGPVVCACRGVRQPRIEAAIADGARDLDAVAGATGAGASCGSCRPEIARLLSATSPQVRHAA
Sequences:
>Translated_880_residues MRTTCPYCGVGCGISAEAEGRALSVAGDPAHPANLGRLCSKGSALGATVGLEGRLLHPTIGDRPATWAEATGLVARRLRE AIARHGPDSVAFYVSGQLLTEDYYAANKLMKGFIGSANIDTNSRLCMASAVVAHKLAFGADLVPGCYEDLDLADLVVLSG HNAAWTHPVLFRRLEAARARGQRHVVIDPRRTDTAEAADLHLPIAPQTDVRLWNGLLADLIRRGAIDLAFLSAHVGGFAE TEAELARADQSPAAVAADCGVPLADLERFFRWFAATPRTVSLFSMGANQSAQGVAKGLAILNVHLATGRIGKPGACPFSI TGQPNAMGGRETGGMATTLAAHMDFEEAARARVRRFWGAPTIAERPGLRAVEMFEAVREGRIKALWIMATNPAVSLPDAG RVREALAACPFVVVSDVMAATDTSAFAHVRLPALAWGEKDGTVTNSERRISRQRPLLPPPGEARADWRIVADVATAMGFG EAFGWRTPAQVFREWARLTAYDNPDRVLNLGPLAALTPEAYDALEPVQWPVTAAGGAPRLFTDGRFQTPDGRGRMHPVAA EGPAEPVDPGYPLALNTGRVRDHWHTLTRTGLAPELCRHAPEPYVEIHPADAAPLGIAEGALTRIVTRQGEAVATARLSD RQRPGSVFLPMHWTQAFAPAGRANPLVAARTDPRSGQPEFKHTPARVRPYRETWRGFLLAPAAVEPPRGCDLVWRRIPQP ACQLHEFAGRGDGAEREAVRRALARGAPAEVLRFEDPAAGVLREAFLAEGRLERVLFLAAAGELPPRDWLAELFAGGVLD PLQRAALLVGRAPGRAVEAGPVVCACRGVRQPRIEAAIADGARDLDAVAGATGAGASCGSCRPEIARLLSATSPQVRHAA >Mature_880_residues MRTTCPYCGVGCGISAEAEGRALSVAGDPAHPANLGRLCSKGSALGATVGLEGRLLHPTIGDRPATWAEATGLVARRLRE AIARHGPDSVAFYVSGQLLTEDYYAANKLMKGFIGSANIDTNSRLCMASAVVAHKLAFGADLVPGCYEDLDLADLVVLSG HNAAWTHPVLFRRLEAARARGQRHVVIDPRRTDTAEAADLHLPIAPQTDVRLWNGLLADLIRRGAIDLAFLSAHVGGFAE TEAELARADQSPAAVAADCGVPLADLERFFRWFAATPRTVSLFSMGANQSAQGVAKGLAILNVHLATGRIGKPGACPFSI TGQPNAMGGRETGGMATTLAAHMDFEEAARARVRRFWGAPTIAERPGLRAVEMFEAVREGRIKALWIMATNPAVSLPDAG RVREALAACPFVVVSDVMAATDTSAFAHVRLPALAWGEKDGTVTNSERRISRQRPLLPPPGEARADWRIVADVATAMGFG EAFGWRTPAQVFREWARLTAYDNPDRVLNLGPLAALTPEAYDALEPVQWPVTAAGGAPRLFTDGRFQTPDGRGRMHPVAA EGPAEPVDPGYPLALNTGRVRDHWHTLTRTGLAPELCRHAPEPYVEIHPADAAPLGIAEGALTRIVTRQGEAVATARLSD RQRPGSVFLPMHWTQAFAPAGRANPLVAARTDPRSGQPEFKHTPARVRPYRETWRGFLLAPAAVEPPRGCDLVWRRIPQP ACQLHEFAGRGDGAEREAVRRALARGAPAEVLRFEDPAAGVLREAFLAEGRLERVLFLAAAGELPPRDWLAELFAGGVLD PLQRAALLVGRAPGRAVEAGPVVCACRGVRQPRIEAAIADGARDLDAVAGATGAGASCGSCRPEIARLLSATSPQVRHAA
Specific function: Nitrate reductase is a key enzyme involved in the first step of nitrate assimilation in plants, fungi and bacteria [H]
COG id: COG0243
COG function: function code C; Anaerobic dehydrogenases, typically selenocysteine-containing
Gene ontology:
Cell location: Periplasmic Protein [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. NasA/napA/narB subfamily [H]
Homologues:
Organism=Escherichia coli, GI1788534, Length=790, Percent_Identity=29.873417721519, Blast_Score=303, Evalue=3e-83, Organism=Escherichia coli, GI3868721, Length=704, Percent_Identity=27.6988636363636, Blast_Score=282, Evalue=6e-77, Organism=Escherichia coli, GI3868719, Length=614, Percent_Identity=23.7785016286645, Blast_Score=143, Evalue=5e-35, Organism=Escherichia coli, GI3868720, Length=612, Percent_Identity=23.6928104575163, Blast_Score=142, Evalue=7e-35, Organism=Escherichia coli, GI1787778, Length=693, Percent_Identity=22.7994227994228, Blast_Score=107, Evalue=3e-24, Organism=Escherichia coli, GI87081797, Length=731, Percent_Identity=22.7086183310534, Blast_Score=97, Evalue=6e-21, Organism=Escherichia coli, GI1787870, Length=720, Percent_Identity=22.6388888888889, Blast_Score=89, Evalue=1e-18, Organism=Escherichia coli, GI87081994, Length=354, Percent_Identity=26.8361581920904, Blast_Score=66, Evalue=9e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR009010 - InterPro: IPR007419 - InterPro: IPR006657 - InterPro: IPR006656 - InterPro: IPR006963 - InterPro: IPR006655 [H]
Pfam domain/function: PF04324 Fer2_BFD; PF04879 Molybdop_Fe4S4; PF00384 Molybdopterin; PF01568 Molydop_binding [H]
EC number: =1.7.99.4 [H]
Molecular weight: Translated: 93772; Mature: 93772
Theoretical pI: Translated: 8.16; Mature: 8.16
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRTTCPYCGVGCGISAEAEGRALSVAGDPAHPANLGRLCSKGSALGATVGLEGRLLHPTI CCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCHHHHHHHCCCCCCEEEECCCCEEECCCC GDRPATWAEATGLVARRLREAIARHGPDSVAFYVSGQLLTEDYYAANKLMKGFIGSANID CCCCCCHHHHHHHHHHHHHHHHHHCCCCCEEEEEECEEEHHHHHHHHHHHHHHCCCCCCC TNSRLCMASAVVAHKLAFGADLVPGCYEDLDLADLVVLSGHNAAWTHPVLFRRLEAARAR CCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEECCCCCCCCHHHHHHHHHHHHHC GQRHVVIDPRRTDTAEAADLHLPIAPQTDVRLWNGLLADLIRRGAIDLAFLSAHVGGFAE CCEEEEECCCCCCCCCCCCEEECCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCHH TEAELARADQSPAAVAADCGVPLADLERFFRWFAATPRTVSLFSMGANQSAQGVAKGLAI HHHHHHHCCCCCCEEECCCCCCHHHHHHHHHHHHCCCCEEEEEECCCCCCHHHHHHCEEE LNVHLATGRIGKPGACPFSITGQPNAMGGRETGGMATTLAAHMDFEEAARARVRRFWGAP EEEEEECCCCCCCCCCCEEECCCCCCCCCCCCCCHHHHHHHHCCHHHHHHHHHHHHHCCC TIAERPGLRAVEMFEAVREGRIKALWIMATNPAVSLPDAGRVREALAACPFVVVSDVMAA CCCCCCCCHHHHHHHHHHCCCEEEEEEEECCCCCCCCCCHHHHHHHHHCHHHHHHHHHHH TDTSAFAHVRLPALAWGEKDGTVTNSERRISRQRPLLPPPGEARADWRIVADVATAMGFG CCCCCEEEEECCCEEECCCCCCCCCHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHH EAFGWRTPAQVFREWARLTAYDNPDRVLNLGPLAALTPEAYDALEPVQWPVTAAGGAPRL HHCCCCCHHHHHHHHHHHCCCCCCCCEEECCCCHHCCCHHHHHCCCCCCCEEECCCCCCE FTDGRFQTPDGRGRMHPVAAEGPAEPVDPGYPLALNTGRVRDHWHTLTRTGLAPELCRHA ECCCCEECCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCHHHHHHHHHCCCCHHHHHCC PEPYVEIHPADAAPLGIAEGALTRIVTRQGEAVATARLSDRQRPGSVFLPMHWTQAFAPA CCCCEEEECCCCCCCCHHHHHHHHHHHCCCCEEEEEHHHCCCCCCCEEEEEHHHHHHCCC GRANPLVAARTDPRSGQPEFKHTPARVRPYRETWRGFLLAPAAVEPPRGCDLVWRRIPQP CCCCCEEEECCCCCCCCCCCCCCCCCCCCHHHHCCCEEECCCCCCCCCCHHHHHHHCCHH ACQLHEFAGRGDGAEREAVRRALARGAPAEVLRFEDPAAGVLREAFLAEGRLERVLFLAA HHHHHHHHCCCCCHHHHHHHHHHHCCCCHHHEEECCCHHHHHHHHHHHCCHHHHEEEEEE AGELPPRDWLAELFAGGVLDPLQRAALLVGRAPGRAVEAGPVVCACRGVRQPRIEAAIAD CCCCCHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCCCCCCCEEEEECCCCCCHHHHHHHC GARDLDAVAGATGAGASCGSCRPEIARLLSATSPQVRHAA CCHHHHHHHCCCCCCCCCCCCCHHHHHHHHCCCCCHHCCC >Mature Secondary Structure MRTTCPYCGVGCGISAEAEGRALSVAGDPAHPANLGRLCSKGSALGATVGLEGRLLHPTI CCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCHHHHHHHCCCCCCEEEECCCCEEECCCC GDRPATWAEATGLVARRLREAIARHGPDSVAFYVSGQLLTEDYYAANKLMKGFIGSANID CCCCCCHHHHHHHHHHHHHHHHHHCCCCCEEEEEECEEEHHHHHHHHHHHHHHCCCCCCC TNSRLCMASAVVAHKLAFGADLVPGCYEDLDLADLVVLSGHNAAWTHPVLFRRLEAARAR CCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEECCCCCCCCHHHHHHHHHHHHHC GQRHVVIDPRRTDTAEAADLHLPIAPQTDVRLWNGLLADLIRRGAIDLAFLSAHVGGFAE CCEEEEECCCCCCCCCCCCEEECCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCHH TEAELARADQSPAAVAADCGVPLADLERFFRWFAATPRTVSLFSMGANQSAQGVAKGLAI HHHHHHHCCCCCCEEECCCCCCHHHHHHHHHHHHCCCCEEEEEECCCCCCHHHHHHCEEE LNVHLATGRIGKPGACPFSITGQPNAMGGRETGGMATTLAAHMDFEEAARARVRRFWGAP EEEEEECCCCCCCCCCCEEECCCCCCCCCCCCCCHHHHHHHHCCHHHHHHHHHHHHHCCC TIAERPGLRAVEMFEAVREGRIKALWIMATNPAVSLPDAGRVREALAACPFVVVSDVMAA CCCCCCCCHHHHHHHHHHCCCEEEEEEEECCCCCCCCCCHHHHHHHHHCHHHHHHHHHHH TDTSAFAHVRLPALAWGEKDGTVTNSERRISRQRPLLPPPGEARADWRIVADVATAMGFG CCCCCEEEEECCCEEECCCCCCCCCHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHH EAFGWRTPAQVFREWARLTAYDNPDRVLNLGPLAALTPEAYDALEPVQWPVTAAGGAPRL HHCCCCCHHHHHHHHHHHCCCCCCCCEEECCCCHHCCCHHHHHCCCCCCCEEECCCCCCE FTDGRFQTPDGRGRMHPVAAEGPAEPVDPGYPLALNTGRVRDHWHTLTRTGLAPELCRHA ECCCCEECCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCHHHHHHHHHCCCCHHHHHCC PEPYVEIHPADAAPLGIAEGALTRIVTRQGEAVATARLSDRQRPGSVFLPMHWTQAFAPA CCCCEEEECCCCCCCCHHHHHHHHHHHCCCCEEEEEHHHCCCCCCCEEEEEHHHHHHCCC GRANPLVAARTDPRSGQPEFKHTPARVRPYRETWRGFLLAPAAVEPPRGCDLVWRRIPQP CCCCCEEEECCCCCCCCCCCCCCCCCCCCHHHHCCCEEECCCCCCCCCCHHHHHHHCCHH ACQLHEFAGRGDGAEREAVRRALARGAPAEVLRFEDPAAGVLREAFLAEGRLERVLFLAA HHHHHHHHCCCCCHHHHHHHHHHHCCCCHHHEEECCCHHHHHHHHHHHCCHHHHEEEEEE AGELPPRDWLAELFAGGVLDPLQRAALLVGRAPGRAVEAGPVVCACRGVRQPRIEAAIAD CCCCCHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCCCCCCCEEEEECCCCCCHHHHHHHC GARDLDAVAGATGAGASCGSCRPEIARLLSATSPQVRHAA CCHHHHHHHCCCCCCCCCCCCCHHHHHHHHCCCCCHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8468296 [H]