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The map label for this gene is nrtC [H]

Identifier: 197104433

GI number: 197104433

Start: 1063946

End: 1064893

Strand: Direct

Name: nrtC [H]

Synonym: PHZ_c0967

Alternate gene names: 197104433

Gene position: 1063946-1064893 (Clockwise)

Preceding gene: 197104432

Following gene: 197104434

Centisome position: 26.62

GC content: 77.64

Gene sequence:

>948_bases
ATGAGGATCCGACTGGGCTTCGTGCCGCTGAGCGACGCTGCGCCGCTCATCGCCGCCCGCGCCTGCGGCTTCTTCGCGGA
GGAGGGGCTGCAGGTCGAGCTGAGCCGGGAAGCTTCCTGGGCCACGGTGCGCGACAAGGTGGCGGTGGGAGCGCTCGACG
GCGCCCACATGCTGGCGCCCATGGTGCTGGCGGCGGCGCTGGGGGTCGGCAGCGAGCCCGCGCCGCTGATCGTCCCCCTC
GCCCTGGCGCGGGGCGGCGCGGCGGTGGCGATCTCGTCCCGCATTCCGGCGGCCGGCCTGGCGCGGCTCGTCGCCCAGCG
GCGGGAGGCGGGCGCCAGCCCGCTCACCTTCGCCGTGGTGTTCCCCTATTCGATCCATGCCTACCTGCTGCGGGCCTGGC
TGGAGCAGGGGGGGATCGATCCCGATGCCGATGTCCGGCTCACCGTCGCGCCGCCGCCGCGCATGGCCGACTTGCTGGCG
GGGGGCGTGATCGAGGGCTTCTGCGCGGGCGAGCCGTGGGCCGCCGCCGCCGTGGCGGCCGGCGCCGGCCAGGTCGCCGT
GCGCGCCGGGCAGCTCTGGCCCGGCGCGCCCGACAAGGTGTTCGCCGTGACCCGGGCCTGGGCCGAGGCCGACCCGCCGC
GCCTGCAGGCGGTGCTCCGGGCCCTGTTGCGCGCCGCCGCCTGGGCCGAAGCGCCGGGGAACCGCGCCGCCGTCGCCGAC
CTGCTGGCCCGGCCGGAGCATTTGCGCCTGGAGCCCGAGCTGATCGCCGCCGGCCTCGATCACATCGTCTACGGCTCGGG
CGCGCCCGAGCCGCGGGACGCCGCCTGGCTGCTCGGCGAGATGAAGCGGTGGGGCCAGATTCCCGCCAGCCTGGACGCCG
CGGCGGCCGCCGCCCCCATCTACCGCCCGGACCTCCACGCCGCGGCGGCCGGGGCGCTCAGCGCCTGA

Upstream 100 bases:

>100_bases
ACCGCGTTCTGCGCAAGCTCTCCATGGACGCGGGCCGGCCCATCGCCGCCGTGGCCGCCGACCTCCTGGCGTTCGCCGGC
GTGCTGAAGGGAGAGGGGCC

Downstream 100 bases:

>100_bases
ATTCTGGTCATCGCGCCGCCTACGGCGCCGTGATTTTGCACTGCGGCATGGCCCCGTGGGCGCCGGGGCCGGTATCGGGG
TGACGAGCCGCCGAGGCGGC

Product: nitrate transport protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 315; Mature: 315

Protein sequence:

>315_residues
MRIRLGFVPLSDAAPLIAARACGFFAEEGLQVELSREASWATVRDKVAVGALDGAHMLAPMVLAAALGVGSEPAPLIVPL
ALARGGAAVAISSRIPAAGLARLVAQRREAGASPLTFAVVFPYSIHAYLLRAWLEQGGIDPDADVRLTVAPPPRMADLLA
GGVIEGFCAGEPWAAAAVAAGAGQVAVRAGQLWPGAPDKVFAVTRAWAEADPPRLQAVLRALLRAAAWAEAPGNRAAVAD
LLARPEHLRLEPELIAAGLDHIVYGSGAPEPRDAAWLLGEMKRWGQIPASLDAAAAAAPIYRPDLHAAAAGALSA

Sequences:

>Translated_315_residues
MRIRLGFVPLSDAAPLIAARACGFFAEEGLQVELSREASWATVRDKVAVGALDGAHMLAPMVLAAALGVGSEPAPLIVPL
ALARGGAAVAISSRIPAAGLARLVAQRREAGASPLTFAVVFPYSIHAYLLRAWLEQGGIDPDADVRLTVAPPPRMADLLA
GGVIEGFCAGEPWAAAAVAAGAGQVAVRAGQLWPGAPDKVFAVTRAWAEADPPRLQAVLRALLRAAAWAEAPGNRAAVAD
LLARPEHLRLEPELIAAGLDHIVYGSGAPEPRDAAWLLGEMKRWGQIPASLDAAAAAAPIYRPDLHAAAAGALSA
>Mature_315_residues
MRIRLGFVPLSDAAPLIAARACGFFAEEGLQVELSREASWATVRDKVAVGALDGAHMLAPMVLAAALGVGSEPAPLIVPL
ALARGGAAVAISSRIPAAGLARLVAQRREAGASPLTFAVVFPYSIHAYLLRAWLEQGGIDPDADVRLTVAPPPRMADLLA
GGVIEGFCAGEPWAAAAVAAGAGQVAVRAGQLWPGAPDKVFAVTRAWAEADPPRLQAVLRALLRAAAWAEAPGNRAAVAD
LLARPEHLRLEPELIAAGLDHIVYGSGAPEPRDAAWLLGEMKRWGQIPASLDAAAAAAPIYRPDLHAAAAGALSA

Specific function: Probably part of a high-affinity binding-protein- dependent transport system for nitrate. Probably responsible for energy coupling to the transport system [H]

COG id: COG0715

COG function: function code P; ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components

Gene ontology:

Cell location: Cell membrane; Peripheral membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transporter domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003439
- InterPro:   IPR017871
- InterPro:   IPR003593
- InterPro:   IPR015168
- InterPro:   IPR005890 [H]

Pfam domain/function: PF00005 ABC_tran; PF09084 NMT1 [H]

EC number: NA

Molecular weight: Translated: 32414; Mature: 32414

Theoretical pI: Translated: 6.37; Mature: 6.37

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRIRLGFVPLSDAAPLIAARACGFFAEEGLQVELSREASWATVRDKVAVGALDGAHMLAP
CEEEEEEEECCCCCHHHHHHHHHHHHHCCCEEEECCCCCHHHHHHHHEEECCCCHHHHHH
MVLAAALGVGSEPAPLIVPLALARGGAAVAISSRIPAAGLARLVAQRREAGASPLTFAVV
HHHHHHHCCCCCCCCEEEEHHHHCCCEEEEECCCCCHHHHHHHHHHHHHCCCCCEEEEEE
FPYSIHAYLLRAWLEQGGIDPDADVRLTVAPPPRMADLLAGGVIEGFCAGEPWAAAAVAA
ECHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCHHHHHHHHHHHHHHCCCCCHHHHHHHC
GAGQVAVRAGQLWPGAPDKVFAVTRAWAEADPPRLQAVLRALLRAAAWAEAPGNRAAVAD
CCCCEEEEECCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHH
LLARPEHLRLEPELIAAGLDHIVYGSGAPEPRDAAWLLGEMKRWGQIPASLDAAAAAAPI
HHCCCHHCCCCHHHHHHCHHHEEECCCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHCCC
YRPDLHAAAAGALSA
CCCCHHHHHHCCCCC
>Mature Secondary Structure
MRIRLGFVPLSDAAPLIAARACGFFAEEGLQVELSREASWATVRDKVAVGALDGAHMLAP
CEEEEEEEECCCCCHHHHHHHHHHHHHCCCEEEECCCCCHHHHHHHHEEECCCCHHHHHH
MVLAAALGVGSEPAPLIVPLALARGGAAVAISSRIPAAGLARLVAQRREAGASPLTFAVV
HHHHHHHCCCCCCCCEEEEHHHHCCCEEEEECCCCCHHHHHHHHHHHHHCCCCCEEEEEE
FPYSIHAYLLRAWLEQGGIDPDADVRLTVAPPPRMADLLAGGVIEGFCAGEPWAAAAVAA
ECHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCHHHHHHHHHHHHHHCCCCCHHHHHHHC
GAGQVAVRAGQLWPGAPDKVFAVTRAWAEADPPRLQAVLRALLRAAAWAEAPGNRAAVAD
CCCCEEEEECCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHH
LLARPEHLRLEPELIAAGLDHIVYGSGAPEPRDAAWLLGEMKRWGQIPASLDAAAAAAPI
HHCCCHHCCCCHHHHHHCHHHEEECCCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHCCC
YRPDLHAAAAGALSA
CCCCHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8905231 [H]