| Definition | Phenylobacterium zucineum HLK1, complete genome. |
|---|---|
| Accession | NC_011144 |
| Length | 3,996,255 |
Click here to switch to the map view.
The map label for this gene is 197104431
Identifier: 197104431
GI number: 197104431
Start: 1062569
End: 1063246
Strand: Direct
Name: 197104431
Synonym: PHZ_c0965
Alternate gene names: NA
Gene position: 1062569-1063246 (Clockwise)
Preceding gene: 197104429
Following gene: 197104432
Centisome position: 26.59
GC content: 74.93
Gene sequence:
>678_bases ATGCACGCGCGCGACTTCCTGCCCAGGCTGGTCCTGGCCGCCGCCATCGCCGGCGGCGTCGGCTACATCTTCACCTGGGA CCTCGAGCTGCCGAAGGCCCTGCATGTGGCCGCCAAGGGGTCGGGCGTCGGCCTGCTGGCGCTCTACGCGGCCCTGCTCG CCAAGGACGCCGACGGGATCCGCATCGCCGCGGTGATGGCCTTCGGCGCCCTGGGCGACGTGCTGCTGGACGCCGTGGGC CTGCAGGTCGGGGCGGTGGCCTTCCTGGTCGGGCACGTCATCGCCATAACCCTCTACGCCCAGAACCTGCGCAGCCCGCT GAGCCCGGCGCGGATCGCCGGCGCGGCCGCGTTCGTGCTGCTGGTCTGCGCCGCCGCCTACAGCCTGCCCGCCGACCGGG CCGGGGCGCCGGCGGTGGCGCTCTACACCGCCGGCCTCGCCGCCATGGCCGCCATGGCCTGGATGAGCCGCTTCCCGCGG ACCTCCACGGGCGTGGGCGCCCTGATGTTCGTGGCCTCGGACCTGCTGATCTTCGGCCAGCTGGGGCCCTGGGACGGCGC GCCGGGGATCGGGCTCGGGATCTGGGGGCTCTACTTCGGCGGCCAGCTGCTGATCTGCCTGGGCGTGACCCGCACCCTGG CGGCGGCGCCGCGCACCTTCCGGCCCGTCACGGCCTAG
Upstream 100 bases:
>100_bases GGGGCGACCGAAGCGCGGCGCGGCTGCGGCGTCAATCCGTAGGCGTGGTACCAATCTTCGGCGAACGCGAGTCGGAAAGA CGTGATCGGGGGGACATGAC
Downstream 100 bases:
>100_bases CGACCCGCGCGGCGCCGGAAAACCGGGCGCCGGGCGCCCGGCCGGCAGGCGTTCGACGCGCCTGAGCGCCGATCGCGCCG AGGAGCGGCGGCCCGCCGGC
Product: hypothetical protein
Products: NA
Alternate protein names: YhhN-Like
Number of amino acids: Translated: 225; Mature: 225
Protein sequence:
>225_residues MHARDFLPRLVLAAAIAGGVGYIFTWDLELPKALHVAAKGSGVGLLALYAALLAKDADGIRIAAVMAFGALGDVLLDAVG LQVGAVAFLVGHVIAITLYAQNLRSPLSPARIAGAAAFVLLVCAAAYSLPADRAGAPAVALYTAGLAAMAAMAWMSRFPR TSTGVGALMFVASDLLIFGQLGPWDGAPGIGLGIWGLYFGGQLLICLGVTRTLAAAPRTFRPVTA
Sequences:
>Translated_225_residues MHARDFLPRLVLAAAIAGGVGYIFTWDLELPKALHVAAKGSGVGLLALYAALLAKDADGIRIAAVMAFGALGDVLLDAVG LQVGAVAFLVGHVIAITLYAQNLRSPLSPARIAGAAAFVLLVCAAAYSLPADRAGAPAVALYTAGLAAMAAMAWMSRFPR TSTGVGALMFVASDLLIFGQLGPWDGAPGIGLGIWGLYFGGQLLICLGVTRTLAAAPRTFRPVTA >Mature_225_residues MHARDFLPRLVLAAAIAGGVGYIFTWDLELPKALHVAAKGSGVGLLALYAALLAKDADGIRIAAVMAFGALGDVLLDAVG LQVGAVAFLVGHVIAITLYAQNLRSPLSPARIAGAAAFVLLVCAAAYSLPADRAGAPAVALYTAGLAAMAAMAWMSRFPR TSTGVGALMFVASDLLIFGQLGPWDGAPGIGLGIWGLYFGGQLLICLGVTRTLAAAPRTFRPVTA
Specific function: Unknown
COG id: COG3714
COG function: function code S; Predicted membrane protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 22929; Mature: 22929
Theoretical pI: Translated: 9.48; Mature: 9.48
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MHARDFLPRLVLAAAIAGGVGYIFTWDLELPKALHVAAKGSGVGLLALYAALLAKDADGI CCHHHHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHCCCCCCHHHHHHHHHHHCCCCCH RIAAVMAFGALGDVLLDAVGLQVGAVAFLVGHVIAITLYAQNLRSPLSPARIAGAAAFVL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHH LVCAAAYSLPADRAGAPAVALYTAGLAAMAAMAWMSRFPRTSTGVGALMFVASDLLIFGQ HHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCC LGPWDGAPGIGLGIWGLYFGGQLLICLGVTRTLAAAPRTFRPVTA CCCCCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCCCC >Mature Secondary Structure MHARDFLPRLVLAAAIAGGVGYIFTWDLELPKALHVAAKGSGVGLLALYAALLAKDADGI CCHHHHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHCCCCCCHHHHHHHHHHHCCCCCH RIAAVMAFGALGDVLLDAVGLQVGAVAFLVGHVIAITLYAQNLRSPLSPARIAGAAAFVL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHH LVCAAAYSLPADRAGAPAVALYTAGLAAMAAMAWMSRFPRTSTGVGALMFVASDLLIFGQ HHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCC LGPWDGAPGIGLGIWGLYFGGQLLICLGVTRTLAAAPRTFRPVTA CCCCCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA