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The map label for this gene is 197104365

Identifier: 197104365

GI number: 197104365

Start: 992706

End: 994139

Strand: Direct

Name: 197104365

Synonym: PHZ_c0899

Alternate gene names: NA

Gene position: 992706-994139 (Clockwise)

Preceding gene: 197104364

Following gene: 197104366

Centisome position: 24.84

GC content: 73.08

Gene sequence:

>1434_bases
ATGCAGGTGGTGCGCCTGGCCTCCGAGACCGACCTCGACGGCTGGCGCGCCGCGGCCCGGCGGCTGCGTGCGGCAGGAAC
GCCGCCCGAGGCGGTGCTCTGGACGGTGGACGGCGAGGCCGGCCTCTTTCCCGCCTCGGAGCCCGCGCCGGCGGGGAACT
CCGCGCGCCCCTTCACCGTGCCGCGGGAGTTCTTCGACCTGGCCGGCCAGGTGGTGCTGCACCGATCGGACGAACGGTTC
GCGCTGCTCTATCGGCTGCTCTGGCGGCTGCAGGACGCGCCGGACCTGCTGCGGATGACCACCGACCCCGACGTCGCCCG
GGCCCGGCAGTTCGCCCGCGACGTGGACAAGGCGGCCCACAAGATGAAGGCCTTCGTCCGCTTCCGGCAGGTCGAGGACG
AGGAGGGCGAGGCCTATGTGGCCTGGTTCGAGCCGGCGCACCGGGTCACCGAGCTGGTCGCCCCGTTCTTCGCGCGCCGC
TTCGCCAACATGCGCTTCTCGATCCTGACGCCGGACGTCTGCGCGCACTGGGACCTGAAGGCGCTGGCCTTTACCCCCGG
GGCCGACGCGGCCGACGCGCCCTCGTCCGACGCCCTGGAGGATTACTGGCGCACCTACTACGCCTCGATCTTCAACCCGG
CCCGGCTGAAGGTCGGGGCCATGACCAAGGAGATGCCTCGGCGCTACTGGCGGAACCTCCCCGAAGCCGGCCTCATTCCC
GAACTGATCGCCAAAGCCGAGGTGAGGACGAGCCAGATGGTGCGCCAGGCCCCCACCGAACCCGACCGCCGGATCGTGCG
CGCCGCCGCCCGCGCCAGCCGCGACGCGCCCTACGACGGCCAGCCGCCGGCGACGCTGGAGGAGGTGGCCGCGGGCGTGC
AGGTCTGCCGGCGGTGCGACCTCTACCGTGACGCGACCCAGGGCGTGCCCGGCGAGGGGCCTCGGCAGGCGCGGCTGATG
TTCGTGGGCGAGCAGCCGGGCGACCAGGAGGACCTGGCGGGACGGCCGTTCGTGGGCCCCGCGGGCGGAGTGCTGGACAA
GGCCCTGGCCGAGGCGGGCATCCCCCGGGCCGAGACGTTCGTCACCAACGCGGTGAAGCACTTCAAGCACGAGCCGCGCG
GCAAGCGCCGGCTGCACAAGACGCCTGACGCGGGCGAGGTCTCGGCCTGCCGCTGGTGGCTGGACGCCGAGCGGCGGATC
GTGCAGCCGCGGGTGGTGGTCGCCCTCGGGGCTACGGCGGCCCTGGCGGTGTTCGGCAAGCCGACGCCGATCGGCAAATT
CCGCCAGCAGGCGATCCAGCTTCCCGACCAGGCCCAGGGCGTGGTCACCTACCACCCCTCGTACCTGCTGCGCGTGCCCG
ACGCAGAGGCCAAGGCGAAGGCCTACGCCATGTTCCTGGACGACCTGCGGTTCGCCTGGACGCTCGCGGCCTGA

Upstream 100 bases:

>100_bases
CGTTCGTGGTGACCGACGACTGGCGGCCTGGCGCCCTGGCCGACGCGGCCGACCTTCGCGCCCGATTCGTTTCCCCGCCG
CAGCAGCTGGAGCTCTTCTG

Downstream 100 bases:

>100_bases
TTGACGGCGGGCGCAACTCCGGGTTTCTGCGAAGGCTGAAGTCACCCCGCGGAGTCGCCATGGCGTCGCTGTTACAGATG
ATGCGCCGCAAGCCTGCGGC

Product: phage SPO1 DNA polymerase-related protein

Products: diphosphate; DNAn+1

Alternate protein names: Uracil-DNA Glycosylase; DNA Polymerase Related Protein; Uracil-DNA Glycosylase Superfamily Protein; Phage SPO1 DNA Polymerase-Like Protein; Uracil DNA Glycosylase Superfamily Protein; Uracil-DNA Glycosylase Superfamily; DNA Polymerase Bacteriophage-Type; DNA Polymerase; DNA Polymerase-Related Protein Bacteriophage-Type; DNA-Directed DNA Polymerase Protein; DNA-Directed DNA Polymerase; Uracil-DNA Glycosylase Family 4 Protein; Phage DNA Polymerase; Helicase/Glycosylase; DNA Glycosylase; Uracil DNA Glycosylase Protein; Arginine Biosynthesis Bifunctional Protein ArgJ; Bacteriophage-Type DNA Polymerase; Uracil DNA Glycosylase; Phage DNA Polymerase-Related Protein; DNA-Directed DNA Polymerase Bacteriophage-Type; Uracil DNA Glycosylase Superfamily; Uracil-DNA Glycosylase Phage-Related Protein; Phage Spo1 DNA Polymerase-Related Protein; Phage SPO1 DNA Polymerase; Phage Spo1 DNA Polymerase Domain Protein; DNA Polymerase-Related Protein; Uracil-DNA Glycosylase-Like Protein; Uracil DNA Glycosylase Family Protein; Transcriptional Regulator Fis Family; Uracil-DNA Glycosylase-Related Protein; N-Terminus Of Phage SPO1 DNA Polymerase; Fis Family Transcriptional Regulator; DNA Polymerase-Like Protein; Leucyl-TRNA Synthetase

Number of amino acids: Translated: 477; Mature: 477

Protein sequence:

>477_residues
MQVVRLASETDLDGWRAAARRLRAAGTPPEAVLWTVDGEAGLFPASEPAPAGNSARPFTVPREFFDLAGQVVLHRSDERF
ALLYRLLWRLQDAPDLLRMTTDPDVARARQFARDVDKAAHKMKAFVRFRQVEDEEGEAYVAWFEPAHRVTELVAPFFARR
FANMRFSILTPDVCAHWDLKALAFTPGADAADAPSSDALEDYWRTYYASIFNPARLKVGAMTKEMPRRYWRNLPEAGLIP
ELIAKAEVRTSQMVRQAPTEPDRRIVRAAARASRDAPYDGQPPATLEEVAAGVQVCRRCDLYRDATQGVPGEGPRQARLM
FVGEQPGDQEDLAGRPFVGPAGGVLDKALAEAGIPRAETFVTNAVKHFKHEPRGKRRLHKTPDAGEVSACRWWLDAERRI
VQPRVVVALGATAALAVFGKPTPIGKFRQQAIQLPDQAQGVVTYHPSYLLRVPDAEAKAKAYAMFLDDLRFAWTLAA

Sequences:

>Translated_477_residues
MQVVRLASETDLDGWRAAARRLRAAGTPPEAVLWTVDGEAGLFPASEPAPAGNSARPFTVPREFFDLAGQVVLHRSDERF
ALLYRLLWRLQDAPDLLRMTTDPDVARARQFARDVDKAAHKMKAFVRFRQVEDEEGEAYVAWFEPAHRVTELVAPFFARR
FANMRFSILTPDVCAHWDLKALAFTPGADAADAPSSDALEDYWRTYYASIFNPARLKVGAMTKEMPRRYWRNLPEAGLIP
ELIAKAEVRTSQMVRQAPTEPDRRIVRAAARASRDAPYDGQPPATLEEVAAGVQVCRRCDLYRDATQGVPGEGPRQARLM
FVGEQPGDQEDLAGRPFVGPAGGVLDKALAEAGIPRAETFVTNAVKHFKHEPRGKRRLHKTPDAGEVSACRWWLDAERRI
VQPRVVVALGATAALAVFGKPTPIGKFRQQAIQLPDQAQGVVTYHPSYLLRVPDAEAKAKAYAMFLDDLRFAWTLAA
>Mature_477_residues
MQVVRLASETDLDGWRAAARRLRAAGTPPEAVLWTVDGEAGLFPASEPAPAGNSARPFTVPREFFDLAGQVVLHRSDERF
ALLYRLLWRLQDAPDLLRMTTDPDVARARQFARDVDKAAHKMKAFVRFRQVEDEEGEAYVAWFEPAHRVTELVAPFFARR
FANMRFSILTPDVCAHWDLKALAFTPGADAADAPSSDALEDYWRTYYASIFNPARLKVGAMTKEMPRRYWRNLPEAGLIP
ELIAKAEVRTSQMVRQAPTEPDRRIVRAAARASRDAPYDGQPPATLEEVAAGVQVCRRCDLYRDATQGVPGEGPRQARLM
FVGEQPGDQEDLAGRPFVGPAGGVLDKALAEAGIPRAETFVTNAVKHFKHEPRGKRRLHKTPDAGEVSACRWWLDAERRI
VQPRVVVALGATAALAVFGKPTPIGKFRQQAIQLPDQAQGVVTYHPSYLLRVPDAEAKAKAYAMFLDDLRFAWTLAA

Specific function: Unknown

COG id: COG1573

COG function: function code L; Uracil-DNA glycosylase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: 2.7.7.7

Molecular weight: Translated: 53076; Mature: 53076

Theoretical pI: Translated: 9.04; Mature: 9.04

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQVVRLASETDLDGWRAAARRLRAAGTPPEAVLWTVDGEAGLFPASEPAPAGNSARPFTV
CCEEEECCCCCCHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCC
PREFFDLAGQVVLHRSDERFALLYRLLWRLQDAPDLLRMTTDPDVARARQFARDVDKAAH
CHHHHHHHCCEEEECCCCHHHHHHHHHHHHCCCCHHHEECCCCHHHHHHHHHHHHHHHHH
KMKAFVRFRQVEDEEGEAYVAWFEPAHRVTELVAPFFARRFANMRFSILTPDVCAHWDLK
HHHHHHHHHHCCCCCCCEEEEEECHHHHHHHHHHHHHHHHHHCCEEEEECCHHHCCCCCE
ALAFTPGADAADAPSSDALEDYWRTYYASIFNPARLKVGAMTKEMPRRYWRNLPEAGLIP
EEEECCCCCCCCCCCCHHHHHHHHHHHHHHCCHHHEEHHHHHHHHHHHHHHCCCCCCCHH
ELIAKAEVRTSQMVRQAPTEPDRRIVRAAARASRDAPYDGQPPATLEEVAAGVQVCRRCD
HHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHH
LYRDATQGVPGEGPRQARLMFVGEQPGDQEDLAGRPFVGPAGGVLDKALAEAGIPRAETF
HHHHHHCCCCCCCCCCEEEEEEECCCCCHHHCCCCCCCCCCCHHHHHHHHHCCCCHHHHH
VTNAVKHFKHEPRGKRRLHKTPDAGEVSACRWWLDAERRIVQPRVVVALGATAALAVFGK
HHHHHHHHHCCCCHHHHCCCCCCCCCHHHHHHHHHHHHHHCCCEEEEEECCHHHHHCCCC
PTPIGKFRQQAIQLPDQAQGVVTYHPSYLLRVPDAEAKAKAYAMFLDDLRFAWTLAA
CCCHHHHHHHHHCCCCCCCCEEEECCCEEEECCCCHHHHHHHHHHHHHHHHHEEECC
>Mature Secondary Structure
MQVVRLASETDLDGWRAAARRLRAAGTPPEAVLWTVDGEAGLFPASEPAPAGNSARPFTV
CCEEEECCCCCCHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCC
PREFFDLAGQVVLHRSDERFALLYRLLWRLQDAPDLLRMTTDPDVARARQFARDVDKAAH
CHHHHHHHCCEEEECCCCHHHHHHHHHHHHCCCCHHHEECCCCHHHHHHHHHHHHHHHHH
KMKAFVRFRQVEDEEGEAYVAWFEPAHRVTELVAPFFARRFANMRFSILTPDVCAHWDLK
HHHHHHHHHHCCCCCCCEEEEEECHHHHHHHHHHHHHHHHHHCCEEEEECCHHHCCCCCE
ALAFTPGADAADAPSSDALEDYWRTYYASIFNPARLKVGAMTKEMPRRYWRNLPEAGLIP
EEEECCCCCCCCCCCCHHHHHHHHHHHHHHCCHHHEEHHHHHHHHHHHHHHCCCCCCCHH
ELIAKAEVRTSQMVRQAPTEPDRRIVRAAARASRDAPYDGQPPATLEEVAAGVQVCRRCD
HHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHH
LYRDATQGVPGEGPRQARLMFVGEQPGDQEDLAGRPFVGPAGGVLDKALAEAGIPRAETF
HHHHHHCCCCCCCCCCEEEEEEECCCCCHHHCCCCCCCCCCCHHHHHHHHHCCCCHHHHH
VTNAVKHFKHEPRGKRRLHKTPDAGEVSACRWWLDAERRIVQPRVVVALGATAALAVFGK
HHHHHHHHHCCCCHHHHCCCCCCCCCHHHHHHHHHHHHHHCCCEEEEEECCHHHHHCCCC
PTPIGKFRQQAIQLPDQAQGVVTYHPSYLLRVPDAEAKAKAYAMFLDDLRFAWTLAA
CCCHHHHHHHHHCCCCCCCCEEEECCCEEEECCCCHHHHHHHHHHHHHHHHHEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: deoxynucleoside triphosphate; DNAn

Specific reaction: deoxynucleoside triphosphate + DNA(n) = diphosphate + DNA(n+1)

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA