| Definition | Phenylobacterium zucineum HLK1, complete genome. |
|---|---|
| Accession | NC_011144 |
| Length | 3,996,255 |
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The map label for this gene is 197104359
Identifier: 197104359
GI number: 197104359
Start: 986695
End: 987726
Strand: Direct
Name: 197104359
Synonym: PHZ_c0893
Alternate gene names: NA
Gene position: 986695-987726 (Clockwise)
Preceding gene: 197104358
Following gene: 197104360
Centisome position: 24.69
GC content: 74.42
Gene sequence:
>1032_bases ATGAAGCGTATCGTCCTCGTCCTCATCGCCGCCCTCAGCCTGGCGGCCTGCAGCACCATGGCGGTGCAGCGGCCGGCCGA GCCGCCGGGCGGCTACCGCGGGCCCTACATCGGCGCCGACGTGGTCGCGAGCTTCGACGGGGCCCTGCTGGGACTGTCGA CCTGGGAGGCCGAGGGCGCGCATGCCGGGAACCCCTGGGCGGTGATCGTCGCGCTGCACGGGATGAACGACTACGCCAAC GCCTTCCACCTGGCCGCGCCGTGGTGGGCGCAGCAGGGCGTGACGACCTACGCCTACGACCAGCGCGGCTTCGGCCGCTC GCCCGGGCGGGGGATCTGGGCCGGCGAGGACCTGATGACCGAGGACCTGCGCACGGTGGTCGCCCTGGCCCGCCGCCGGC ACCCGGACGCGCTGATCGCGGTGGTTGGGGAGAGCATGGGCGGGGCGGTGGCCGCGGCGGCCTTCGCCTCGGACCGGCCG CCCGACGCCGACCGGCTGATCCTGCTGGCGCCGGCGGTCTGGGGTTGGCGCGACCAGCCGCTGCCGAACCGCACCATGCT GTGGCTCGCGGCCAACTTCACGGCCGCCAAGGTCTACACCCCGCCGCGCTGGCTCACCTCGCGGATCACGCCGACCGACA ACCGCGAGGAGCTGATCCGCATGGGCCGCGACCCGCTGATGATCTGGGGCGCGCGCTCGGACGCCCTCTATGGCCTCGTG GGCCTGATGGACCGGGGGGCCGAGACCGTCGGGGACGATCCCGTGCCGACGCTGTACCTCTACGGCGCCAACGACCAGAT CATCCCGAAGCACGCCGCCTTCCGCGCCGCCGCCAACCTGCGCCGCTCGGACCGCTCGGCCTACTACGCCAAGGGCTACC ACCTGCTGACCCGCGATCGGCAGGGGCCCGTGGTCTGGGCCGACGTCCTGGCCTTCCTGAAGGACCGGCGCGCGCCGCTG CCGTCGGGCGCCCCGCCGATCCCCACGGCGCCCGCGCCGGATGGAGCCGAACGCCGGGCTGCGGGGTTGTGA
Upstream 100 bases:
>100_bases ATCCTGGAGCGGCCGTCCTTCGCCGGGCTGATCGCCCAGGAAAAGGCGTTCCTGGCGGCGTGATCCGCCGGGCGCGGCGC CTGGAGGGTCCCGCCTGCCG
Downstream 100 bases:
>100_bases GGTGCGGCGCCAGGGCGTAGAGGCTGGCGAGAAAACCTTTCACGCGAAGGCAGAGTCTGCGGCATGACCTTGTTCGATTC CCCGGCTTTCGAAGGACACG
Product: lysophospholipase
Products: NA
Alternate protein names: Alpha/Beta Hydrolase Fold; Lysophospholipase; Esterase/Lipase; Acylglycerol Lipase; Alpha/Beta Fold Family Hydrolase; Hydrolase Alpha/Beta Fold Family Protein; Lysophospholipase-Like Protein
Number of amino acids: Translated: 343; Mature: 343
Protein sequence:
>343_residues MKRIVLVLIAALSLAACSTMAVQRPAEPPGGYRGPYIGADVVASFDGALLGLSTWEAEGAHAGNPWAVIVALHGMNDYAN AFHLAAPWWAQQGVTTYAYDQRGFGRSPGRGIWAGEDLMTEDLRTVVALARRRHPDALIAVVGESMGGAVAAAAFASDRP PDADRLILLAPAVWGWRDQPLPNRTMLWLAANFTAAKVYTPPRWLTSRITPTDNREELIRMGRDPLMIWGARSDALYGLV GLMDRGAETVGDDPVPTLYLYGANDQIIPKHAAFRAAANLRRSDRSAYYAKGYHLLTRDRQGPVVWADVLAFLKDRRAPL PSGAPPIPTAPAPDGAERRAAGL
Sequences:
>Translated_343_residues MKRIVLVLIAALSLAACSTMAVQRPAEPPGGYRGPYIGADVVASFDGALLGLSTWEAEGAHAGNPWAVIVALHGMNDYAN AFHLAAPWWAQQGVTTYAYDQRGFGRSPGRGIWAGEDLMTEDLRTVVALARRRHPDALIAVVGESMGGAVAAAAFASDRP PDADRLILLAPAVWGWRDQPLPNRTMLWLAANFTAAKVYTPPRWLTSRITPTDNREELIRMGRDPLMIWGARSDALYGLV GLMDRGAETVGDDPVPTLYLYGANDQIIPKHAAFRAAANLRRSDRSAYYAKGYHLLTRDRQGPVVWADVLAFLKDRRAPL PSGAPPIPTAPAPDGAERRAAGL >Mature_343_residues MKRIVLVLIAALSLAACSTMAVQRPAEPPGGYRGPYIGADVVASFDGALLGLSTWEAEGAHAGNPWAVIVALHGMNDYAN AFHLAAPWWAQQGVTTYAYDQRGFGRSPGRGIWAGEDLMTEDLRTVVALARRRHPDALIAVVGESMGGAVAAAAFASDRP PDADRLILLAPAVWGWRDQPLPNRTMLWLAANFTAAKVYTPPRWLTSRITPTDNREELIRMGRDPLMIWGARSDALYGLV GLMDRGAETVGDDPVPTLYLYGANDQIIPKHAAFRAAANLRRSDRSAYYAKGYHLLTRDRQGPVVWADVLAFLKDRRAPL PSGAPPIPTAPAPDGAERRAAGL
Specific function: Unknown
COG id: COG2267
COG function: function code I; Lysophospholipase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 37066; Mature: 37066
Theoretical pI: Translated: 9.17; Mature: 9.17
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKRIVLVLIAALSLAACSTMAVQRPAEPPGGYRGPYIGADVVASFDGALLGLSTWEAEGA CHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHCCCCEEECEECCCCCC HAGNPWAVIVALHGMNDYANAFHLAAPWWAQQGVTTYAYDQRGFGRSPGRGIWAGEDLMT CCCCCEEEEEEEECCCHHHCEEEECCCHHHHCCCEEEEECCCCCCCCCCCCCCCCCHHHH EDLRTVVALARRRHPDALIAVVGESMGGAVAAAAFASDRPPDADRLILLAPAVWGWRDQP HHHHHHHHHHHHCCCCEEEEEECCCCCCHHHHHHHHCCCCCCCCCEEEEECCCCCCCCCC LPNRTMLWLAANFTAAKVYTPPRWLTSRITPTDNREELIRMGRDPLMIWGARSDALYGLV CCCCEEEEEEECCEEEEEECCCHHHHCCCCCCCCHHHHHHCCCCCEEEEECCCCHHHHHH GLMDRGAETVGDDPVPTLYLYGANDQIIPKHAAFRAAANLRRSDRSAYYAKGYHLLTRDR HHHHCCCHHCCCCCCCEEEEECCCCCCCCHHHHHHHHHHHHHCCCCEEEECCEEEEECCC QGPVVWADVLAFLKDRRAPLPSGAPPIPTAPAPDGAERRAAGL CCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHCCC >Mature Secondary Structure MKRIVLVLIAALSLAACSTMAVQRPAEPPGGYRGPYIGADVVASFDGALLGLSTWEAEGA CHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHCCCCEEECEECCCCCC HAGNPWAVIVALHGMNDYANAFHLAAPWWAQQGVTTYAYDQRGFGRSPGRGIWAGEDLMT CCCCCEEEEEEEECCCHHHCEEEECCCHHHHCCCEEEEECCCCCCCCCCCCCCCCCHHHH EDLRTVVALARRRHPDALIAVVGESMGGAVAAAAFASDRPPDADRLILLAPAVWGWRDQP HHHHHHHHHHHHCCCCEEEEEECCCCCCHHHHHHHHCCCCCCCCCEEEEECCCCCCCCCC LPNRTMLWLAANFTAAKVYTPPRWLTSRITPTDNREELIRMGRDPLMIWGARSDALYGLV CCCCEEEEEEECCEEEEEECCCHHHHCCCCCCCCHHHHHHCCCCCEEEEECCCCHHHHHH GLMDRGAETVGDDPVPTLYLYGANDQIIPKHAAFRAAANLRRSDRSAYYAKGYHLLTRDR HHHHCCCHHCCCCCCCEEEEECCCCCCCCHHHHHHHHHHHHHCCCCEEEECCEEEEECCC QGPVVWADVLAFLKDRRAPLPSGAPPIPTAPAPDGAERRAAGL CCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA