Definition | Phenylobacterium zucineum HLK1, complete genome. |
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Accession | NC_011144 |
Length | 3,996,255 |
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The map label for this gene is serB [C]
Identifier: 197104341
GI number: 197104341
Start: 968414
End: 969283
Strand: Direct
Name: serB [C]
Synonym: PHZ_c0875
Alternate gene names: 197104341
Gene position: 968414-969283 (Clockwise)
Preceding gene: 197104336
Following gene: 197104342
Centisome position: 24.23
GC content: 73.1
Gene sequence:
>870_bases ATGGAGCTTGTCCTTACACTCGTGGGCCGCGACGCCCCCGCCGCGGCCGAAGCGCTCGCAGCCGCCGGCCTTCCCGTCAA GTCGCCCCGGCCGCTGGGCCCGGACGCCCTCGACGCCTCGCTCACCGGCGACCTGAAGACCCTGCGCGCCGCCGCCTCGG AGGCGCTCGCGGACCTCGCCGTCGACGCCTGCCTCCAGCGCGCCGAGGGTCGCCGCAAGCGGCTGTTCGTGGCCGACATG GACTCCACCATCATCGACGTCGAGTGCCTGGACGAACTGGCCGACTTCGCGGGCAGAAAGGCCGAGATCGCGGCCATCAC CGAGCGGGCGATGCGCGGCGAGCTGGAGTTCGAGGGCGCCCTGCGCGAGCGGGTGGGCATGCTGGCCGGCCTCTCCGCCG AGGCGCTGCAGCAGGCCTATGACGAACGGGTCCGGCTCAATCCCGGCGCCCGCACCCTCGTCCGCACCATGGCCGCCAAC GGGACGCGCTGCCTGCTGGTCTCGGGCGGCTTCACCTTCTTCACCAGCCGGGTGGCGCAGGCCGCGGGCTTCCACGACAA CCGCGCCAACACCCTCATCGAGGAGGGCGGGCGCCTGACGGGGCGCGTGGGCGAGCCGATCCTCGGCAAGGCCGCCAAGC TCTCGGCCCTGCTGTCCGAGGCCGAGGCCCTGAGCCTGCCGCTGCACGAGACGATGGCGGTCGGCGACGGCGCCAACGAC CTGGCGATGATCGAGGCCGCCGGCCTGGGGGTCGCCTATCGCGCCAAGCCGATCGTCGCGGCCCAGGCCGACGCCAAGGT GGACCACGCCGACCTGACCGCGCTGCTCTACTTCCAGGGCTACCGGGCCGACGAGTTCGTCACGGATTGA
Upstream 100 bases:
>100_bases GGCGTTGACGATCTCGGCCCCGCTCGCCTCGGCCAGCCGGAGCGCCAGCGCCGACTTGCCGCTTGCCGTGGGCCCGGCGA TCAGCCAGATGCGGGGCTCC
Downstream 100 bases:
>100_bases AACGGCAGGTGACTTGCCGCCCGGCCGAACCGGCTTAAATCCACGGGCATGGCCCTCCCGCGTCCCGTCAAAGCCGTCGT CTTCGACATGGACGGCCTGC
Product: phosphoserine phosphatase
Products: NA
Alternate protein names: PSP; PSPase; O-phosphoserine phosphohydrolase [H]
Number of amino acids: Translated: 289; Mature: 289
Protein sequence:
>289_residues MELVLTLVGRDAPAAAEALAAAGLPVKSPRPLGPDALDASLTGDLKTLRAAASEALADLAVDACLQRAEGRRKRLFVADM DSTIIDVECLDELADFAGRKAEIAAITERAMRGELEFEGALRERVGMLAGLSAEALQQAYDERVRLNPGARTLVRTMAAN GTRCLLVSGGFTFFTSRVAQAAGFHDNRANTLIEEGGRLTGRVGEPILGKAAKLSALLSEAEALSLPLHETMAVGDGAND LAMIEAAGLGVAYRAKPIVAAQADAKVDHADLTALLYFQGYRADEFVTD
Sequences:
>Translated_289_residues MELVLTLVGRDAPAAAEALAAAGLPVKSPRPLGPDALDASLTGDLKTLRAAASEALADLAVDACLQRAEGRRKRLFVADM DSTIIDVECLDELADFAGRKAEIAAITERAMRGELEFEGALRERVGMLAGLSAEALQQAYDERVRLNPGARTLVRTMAAN GTRCLLVSGGFTFFTSRVAQAAGFHDNRANTLIEEGGRLTGRVGEPILGKAAKLSALLSEAEALSLPLHETMAVGDGAND LAMIEAAGLGVAYRAKPIVAAQADAKVDHADLTALLYFQGYRADEFVTD >Mature_289_residues MELVLTLVGRDAPAAAEALAAAGLPVKSPRPLGPDALDASLTGDLKTLRAAASEALADLAVDACLQRAEGRRKRLFVADM DSTIIDVECLDELADFAGRKAEIAAITERAMRGELEFEGALRERVGMLAGLSAEALQQAYDERVRLNPGARTLVRTMAAN GTRCLLVSGGFTFFTSRVAQAAGFHDNRANTLIEEGGRLTGRVGEPILGKAAKLSALLSEAEALSLPLHETMAVGDGAND LAMIEAAGLGVAYRAKPIVAAQADAKVDHADLTALLYFQGYRADEFVTD
Specific function: Unknown
COG id: COG0560
COG function: function code E; Phosphoserine phosphatase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 ACT domain [H]
Homologues:
Organism=Escherichia coli, GI1790849, Length=206, Percent_Identity=44.1747572815534, Blast_Score=157, Evalue=9e-40, Organism=Saccharomyces cerevisiae, GI6321647, Length=244, Percent_Identity=33.6065573770492, Blast_Score=145, Evalue=5e-36, Organism=Drosophila melanogaster, GI24661601, Length=190, Percent_Identity=26.3157894736842, Blast_Score=68, Evalue=9e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002912 - InterPro: IPR005834 - InterPro: IPR023214 - InterPro: IPR006383 - InterPro: IPR023190 - InterPro: IPR004469 [H]
Pfam domain/function: PF01842 ACT; PF00702 Hydrolase [H]
EC number: =3.1.3.3 [H]
Molecular weight: Translated: 30406; Mature: 30406
Theoretical pI: Translated: 4.64; Mature: 4.64
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MELVLTLVGRDAPAAAEALAAAGLPVKSPRPLGPDALDASLTGDLKTLRAAASEALADLA CCEEEEEECCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHH VDACLQRAEGRRKRLFVADMDSTIIDVECLDELADFAGRKAEIAAITERAMRGELEFEGA HHHHHHHHCCCCCEEEEEECCCCEEHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCHHHHH LRERVGMLAGLSAEALQQAYDERVRLNPGARTLVRTMAANGTRCLLVSGGFTFFTSRVAQ HHHHHHHHHCCCHHHHHHHHHHCEECCCCHHHHHHHHHCCCCEEEEEECCHHHHHHHHHH AAGFHDNRANTLIEEGGRLTGRVGEPILGKAAKLSALLSEAEALSLPLHETMAVGDGAND HCCCCCCHHHHHHHCCCCEECCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHCCCCCCCC LAMIEAAGLGVAYRAKPIVAAQADAKVDHADLTALLYFQGYRADEFVTD EEEEEECCCCEEEECCCEEEECCCCCCCHHHHHEEEEEECCCCCCCCCC >Mature Secondary Structure MELVLTLVGRDAPAAAEALAAAGLPVKSPRPLGPDALDASLTGDLKTLRAAASEALADLA CCEEEEEECCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHH VDACLQRAEGRRKRLFVADMDSTIIDVECLDELADFAGRKAEIAAITERAMRGELEFEGA HHHHHHHHCCCCCEEEEEECCCCEEHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCHHHHH LRERVGMLAGLSAEALQQAYDERVRLNPGARTLVRTMAANGTRCLLVSGGFTFFTSRVAQ HHHHHHHHHCCCHHHHHHHHHHCEECCCCHHHHHHHHHCCCCEEEEEECCHHHHHHHHHH AAGFHDNRANTLIEEGGRLTGRVGEPILGKAAKLSALLSEAEALSLPLHETMAVGDGAND HCCCCCCHHHHHHHCCCCEECCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHCCCCCCCC LAMIEAAGLGVAYRAKPIVAAQADAKVDHADLTALLYFQGYRADEFVTD EEEEEECCCCEEEECCCEEEECCCCCCCHHHHHEEEEEECCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9389475 [H]