Definition Phenylobacterium zucineum HLK1, complete genome.
Accession NC_011144
Length 3,996,255

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The map label for this gene is ubiG [H]

Identifier: 197104308

GI number: 197104308

Start: 929576

End: 930334

Strand: Direct

Name: ubiG [H]

Synonym: PHZ_c0842

Alternate gene names: 197104308

Gene position: 929576-930334 (Clockwise)

Preceding gene: 197104306

Following gene: 197104309

Centisome position: 23.26

GC content: 70.09

Gene sequence:

>759_bases
ATGAGTTCGCCCACCGCCGCCCGTTCCAGCATCGATCCTGCCGAAGTCGAGCGCTTCTCGCGCATCGCCGCCGAATGGTG
GGACCCGAACGGCAAGTTCGCGCCCCTGCACCGCTTCAACCCCGTGCGGTTGGCCTTCATCCGCGACCACGCCCTCTATC
GCTTCGGCCGCGACGGCGCCCAGCGGCGGCCCTTCGAGGGCTTACGCCTGCTCGACATCGGCTGCGGCGGCGGCCTCCTG
TCCGAGCCGATGGCGCGCCTGGGCTTCACCGTCACCGCCGTGGACGCCTCCGAGCGCAACATCCTCACCGCCAGCACGCA
CGCGGCGGAGCAGGGGCTCGACATCGACTACCGCTGCACGACGGCCGAGGACCTGCTGGCCGCCGGCGAGTCGCCCTTCG
ACGTGATCCTCAACATGGAGGTGATCGAGCACGTGGCCGACCCGGGCGCCTATCTGCGCGACTGCTCCCGGCTGCTGGCC
CCCGGCGGGCTGATGATCGTCGCCACGCTCAACCGCACGCTCAAGGCCCTGGCCCTGGCCAAGATCGGCGCCGAGTACGT
GCTGCGCTGGCTCCCGGCCGGCACCCACGACTGGAACAAGTTCCTCAAGCCGGACGAGATCCGCGGCTTCCTCGCCGGCG
AGCCGGTCGCCGTGGACGGGCCCTACGGCGTGGTGTTCAATCCGCTGACCGGCCGGTGGACGGAGTCCGTCGATTCGGAC
GTGAACTACATGATGACGGTCGTCCGCCCGGCAGCTTAG

Upstream 100 bases:

>100_bases
TTGCTGCGCCGCGAAAGGGCGTCGCCTCATAGCGGCGCGCGCCGCCTGCGGCAACGCTCAGAATCTTTCGTTTCGGCTCG
CGTCGGCGGTAGAAGGGGGC

Downstream 100 bases:

>100_bases
GCGGACGATCCAGGCGGCGTCCGGGGGGACGGTCAGGAGCAGGGATGGCTTCGCTACGCGTGCTGGGGCACGCCTTCCGG
GCCTGGCGGCGCAACCGCCG

Product: 3-demethylubiquinone-9 3-methyltransferase

Products: NA

Alternate protein names: 3,4-dihydroxy-5-hexaprenylbenzoate methyltransferase; DHHB methyltransferase [H]

Number of amino acids: Translated: 252; Mature: 251

Protein sequence:

>252_residues
MSSPTAARSSIDPAEVERFSRIAAEWWDPNGKFAPLHRFNPVRLAFIRDHALYRFGRDGAQRRPFEGLRLLDIGCGGGLL
SEPMARLGFTVTAVDASERNILTASTHAAEQGLDIDYRCTTAEDLLAAGESPFDVILNMEVIEHVADPGAYLRDCSRLLA
PGGLMIVATLNRTLKALALAKIGAEYVLRWLPAGTHDWNKFLKPDEIRGFLAGEPVAVDGPYGVVFNPLTGRWTESVDSD
VNYMMTVVRPAA

Sequences:

>Translated_252_residues
MSSPTAARSSIDPAEVERFSRIAAEWWDPNGKFAPLHRFNPVRLAFIRDHALYRFGRDGAQRRPFEGLRLLDIGCGGGLL
SEPMARLGFTVTAVDASERNILTASTHAAEQGLDIDYRCTTAEDLLAAGESPFDVILNMEVIEHVADPGAYLRDCSRLLA
PGGLMIVATLNRTLKALALAKIGAEYVLRWLPAGTHDWNKFLKPDEIRGFLAGEPVAVDGPYGVVFNPLTGRWTESVDSD
VNYMMTVVRPAA
>Mature_251_residues
SSPTAARSSIDPAEVERFSRIAAEWWDPNGKFAPLHRFNPVRLAFIRDHALYRFGRDGAQRRPFEGLRLLDIGCGGGLLS
EPMARLGFTVTAVDASERNILTASTHAAEQGLDIDYRCTTAEDLLAAGESPFDVILNMEVIEHVADPGAYLRDCSRLLAP
GGLMIVATLNRTLKALALAKIGAEYVLRWLPAGTHDWNKFLKPDEIRGFLAGEPVAVDGPYGVVFNPLTGRWTESVDSDV
NYMMTVVRPAA

Specific function: Ubiquinone biosynthesis. [C]

COG id: COG2227

COG function: function code H; 2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1,4-benzoquinol methylase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the methyltransferase superfamily. UbiG/COQ3 family [H]

Homologues:

Organism=Homo sapiens, GI118600965, Length=248, Percent_Identity=35.4838709677419, Blast_Score=188, Evalue=4e-48,
Organism=Escherichia coli, GI1788564, Length=244, Percent_Identity=38.9344262295082, Blast_Score=194, Evalue=5e-51,
Organism=Caenorhabditis elegans, GI115533050, Length=248, Percent_Identity=34.2741935483871, Blast_Score=142, Evalue=1e-34,
Organism=Saccharomyces cerevisiae, GI6324476, Length=277, Percent_Identity=31.4079422382672, Blast_Score=120, Evalue=3e-28,
Organism=Drosophila melanogaster, GI281365311, Length=260, Percent_Identity=30.7692307692308, Blast_Score=127, Evalue=5e-30,
Organism=Drosophila melanogaster, GI24585589, Length=220, Percent_Identity=34.0909090909091, Blast_Score=125, Evalue=3e-29,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013216
- InterPro:   IPR010233 [H]

Pfam domain/function: PF08241 Methyltransf_11 [H]

EC number: =2.1.1.64 [H]

Molecular weight: Translated: 27613; Mature: 27482

Theoretical pI: Translated: 5.37; Mature: 5.37

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSSPTAARSSIDPAEVERFSRIAAEWWDPNGKFAPLHRFNPVRLAFIRDHALYRFGRDGA
CCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEEHHHHHHHHCCCCC
QRRPFEGLRLLDIGCGGGLLSEPMARLGFTVTAVDASERNILTASTHAAEQGLDIDYRCT
CCCCCCCCEEEEECCCCCHHHHHHHHHCCEEEEECCCCCCEEEECCHHHHHCCCCEEEEC
TAEDLLAAGESPFDVILNMEVIEHVADPGAYLRDCSRLLAPGGLMIVATLNRTLKALALA
CHHHHHHCCCCCHHEEEEHHHHHHHCCCCHHHHHHHHHHCCCCEEEEEEHHHHHHHHHHH
KIGAEYVLRWLPAGTHDWNKFLKPDEIRGFLAGEPVAVDGPYGVVFNPLTGRWTESVDSD
HHHHHHHHHHCCCCCCCHHHCCCCHHHHHEECCCCEEECCCCCEEECCCCCCHHHHHCCC
VNYMMTVVRPAA
HHEEEEEEECCC
>Mature Secondary Structure 
SSPTAARSSIDPAEVERFSRIAAEWWDPNGKFAPLHRFNPVRLAFIRDHALYRFGRDGA
CCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEEHHHHHHHHCCCCC
QRRPFEGLRLLDIGCGGGLLSEPMARLGFTVTAVDASERNILTASTHAAEQGLDIDYRCT
CCCCCCCCEEEEECCCCCHHHHHHHHHCCEEEEECCCCCCEEEECCHHHHHCCCCEEEEC
TAEDLLAAGESPFDVILNMEVIEHVADPGAYLRDCSRLLAPGGLMIVATLNRTLKALALA
CHHHHHHCCCCCHHEEEEHHHHHHHCCCCHHHHHHHHHHCCCCEEEEEEHHHHHHHHHHH
KIGAEYVLRWLPAGTHDWNKFLKPDEIRGFLAGEPVAVDGPYGVVFNPLTGRWTESVDSD
HHHHHHHHHHCCCCCCCHHHCCCCHHHHHEECCCCEEECCCCCEEECCCCCCHHHHHCCC
VNYMMTVVRPAA
HHEEEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA