| Definition | Phenylobacterium zucineum HLK1, complete genome. |
|---|---|
| Accession | NC_011144 |
| Length | 3,996,255 |
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The map label for this gene is ubiG [H]
Identifier: 197104308
GI number: 197104308
Start: 929576
End: 930334
Strand: Direct
Name: ubiG [H]
Synonym: PHZ_c0842
Alternate gene names: 197104308
Gene position: 929576-930334 (Clockwise)
Preceding gene: 197104306
Following gene: 197104309
Centisome position: 23.26
GC content: 70.09
Gene sequence:
>759_bases ATGAGTTCGCCCACCGCCGCCCGTTCCAGCATCGATCCTGCCGAAGTCGAGCGCTTCTCGCGCATCGCCGCCGAATGGTG GGACCCGAACGGCAAGTTCGCGCCCCTGCACCGCTTCAACCCCGTGCGGTTGGCCTTCATCCGCGACCACGCCCTCTATC GCTTCGGCCGCGACGGCGCCCAGCGGCGGCCCTTCGAGGGCTTACGCCTGCTCGACATCGGCTGCGGCGGCGGCCTCCTG TCCGAGCCGATGGCGCGCCTGGGCTTCACCGTCACCGCCGTGGACGCCTCCGAGCGCAACATCCTCACCGCCAGCACGCA CGCGGCGGAGCAGGGGCTCGACATCGACTACCGCTGCACGACGGCCGAGGACCTGCTGGCCGCCGGCGAGTCGCCCTTCG ACGTGATCCTCAACATGGAGGTGATCGAGCACGTGGCCGACCCGGGCGCCTATCTGCGCGACTGCTCCCGGCTGCTGGCC CCCGGCGGGCTGATGATCGTCGCCACGCTCAACCGCACGCTCAAGGCCCTGGCCCTGGCCAAGATCGGCGCCGAGTACGT GCTGCGCTGGCTCCCGGCCGGCACCCACGACTGGAACAAGTTCCTCAAGCCGGACGAGATCCGCGGCTTCCTCGCCGGCG AGCCGGTCGCCGTGGACGGGCCCTACGGCGTGGTGTTCAATCCGCTGACCGGCCGGTGGACGGAGTCCGTCGATTCGGAC GTGAACTACATGATGACGGTCGTCCGCCCGGCAGCTTAG
Upstream 100 bases:
>100_bases TTGCTGCGCCGCGAAAGGGCGTCGCCTCATAGCGGCGCGCGCCGCCTGCGGCAACGCTCAGAATCTTTCGTTTCGGCTCG CGTCGGCGGTAGAAGGGGGC
Downstream 100 bases:
>100_bases GCGGACGATCCAGGCGGCGTCCGGGGGGACGGTCAGGAGCAGGGATGGCTTCGCTACGCGTGCTGGGGCACGCCTTCCGG GCCTGGCGGCGCAACCGCCG
Product: 3-demethylubiquinone-9 3-methyltransferase
Products: NA
Alternate protein names: 3,4-dihydroxy-5-hexaprenylbenzoate methyltransferase; DHHB methyltransferase [H]
Number of amino acids: Translated: 252; Mature: 251
Protein sequence:
>252_residues MSSPTAARSSIDPAEVERFSRIAAEWWDPNGKFAPLHRFNPVRLAFIRDHALYRFGRDGAQRRPFEGLRLLDIGCGGGLL SEPMARLGFTVTAVDASERNILTASTHAAEQGLDIDYRCTTAEDLLAAGESPFDVILNMEVIEHVADPGAYLRDCSRLLA PGGLMIVATLNRTLKALALAKIGAEYVLRWLPAGTHDWNKFLKPDEIRGFLAGEPVAVDGPYGVVFNPLTGRWTESVDSD VNYMMTVVRPAA
Sequences:
>Translated_252_residues MSSPTAARSSIDPAEVERFSRIAAEWWDPNGKFAPLHRFNPVRLAFIRDHALYRFGRDGAQRRPFEGLRLLDIGCGGGLL SEPMARLGFTVTAVDASERNILTASTHAAEQGLDIDYRCTTAEDLLAAGESPFDVILNMEVIEHVADPGAYLRDCSRLLA PGGLMIVATLNRTLKALALAKIGAEYVLRWLPAGTHDWNKFLKPDEIRGFLAGEPVAVDGPYGVVFNPLTGRWTESVDSD VNYMMTVVRPAA >Mature_251_residues SSPTAARSSIDPAEVERFSRIAAEWWDPNGKFAPLHRFNPVRLAFIRDHALYRFGRDGAQRRPFEGLRLLDIGCGGGLLS EPMARLGFTVTAVDASERNILTASTHAAEQGLDIDYRCTTAEDLLAAGESPFDVILNMEVIEHVADPGAYLRDCSRLLAP GGLMIVATLNRTLKALALAKIGAEYVLRWLPAGTHDWNKFLKPDEIRGFLAGEPVAVDGPYGVVFNPLTGRWTESVDSDV NYMMTVVRPAA
Specific function: Ubiquinone biosynthesis. [C]
COG id: COG2227
COG function: function code H; 2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1,4-benzoquinol methylase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the methyltransferase superfamily. UbiG/COQ3 family [H]
Homologues:
Organism=Homo sapiens, GI118600965, Length=248, Percent_Identity=35.4838709677419, Blast_Score=188, Evalue=4e-48, Organism=Escherichia coli, GI1788564, Length=244, Percent_Identity=38.9344262295082, Blast_Score=194, Evalue=5e-51, Organism=Caenorhabditis elegans, GI115533050, Length=248, Percent_Identity=34.2741935483871, Blast_Score=142, Evalue=1e-34, Organism=Saccharomyces cerevisiae, GI6324476, Length=277, Percent_Identity=31.4079422382672, Blast_Score=120, Evalue=3e-28, Organism=Drosophila melanogaster, GI281365311, Length=260, Percent_Identity=30.7692307692308, Blast_Score=127, Evalue=5e-30, Organism=Drosophila melanogaster, GI24585589, Length=220, Percent_Identity=34.0909090909091, Blast_Score=125, Evalue=3e-29,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013216 - InterPro: IPR010233 [H]
Pfam domain/function: PF08241 Methyltransf_11 [H]
EC number: =2.1.1.64 [H]
Molecular weight: Translated: 27613; Mature: 27482
Theoretical pI: Translated: 5.37; Mature: 5.37
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSSPTAARSSIDPAEVERFSRIAAEWWDPNGKFAPLHRFNPVRLAFIRDHALYRFGRDGA CCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEEHHHHHHHHCCCCC QRRPFEGLRLLDIGCGGGLLSEPMARLGFTVTAVDASERNILTASTHAAEQGLDIDYRCT CCCCCCCCEEEEECCCCCHHHHHHHHHCCEEEEECCCCCCEEEECCHHHHHCCCCEEEEC TAEDLLAAGESPFDVILNMEVIEHVADPGAYLRDCSRLLAPGGLMIVATLNRTLKALALA CHHHHHHCCCCCHHEEEEHHHHHHHCCCCHHHHHHHHHHCCCCEEEEEEHHHHHHHHHHH KIGAEYVLRWLPAGTHDWNKFLKPDEIRGFLAGEPVAVDGPYGVVFNPLTGRWTESVDSD HHHHHHHHHHCCCCCCCHHHCCCCHHHHHEECCCCEEECCCCCEEECCCCCCHHHHHCCC VNYMMTVVRPAA HHEEEEEEECCC >Mature Secondary Structure SSPTAARSSIDPAEVERFSRIAAEWWDPNGKFAPLHRFNPVRLAFIRDHALYRFGRDGA CCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEEHHHHHHHHCCCCC QRRPFEGLRLLDIGCGGGLLSEPMARLGFTVTAVDASERNILTASTHAAEQGLDIDYRCT CCCCCCCCEEEEECCCCCHHHHHHHHHCCEEEEECCCCCCEEEECCHHHHHCCCCEEEEC TAEDLLAAGESPFDVILNMEVIEHVADPGAYLRDCSRLLAPGGLMIVATLNRTLKALALA CHHHHHHCCCCCHHEEEEHHHHHHHCCCCHHHHHHHHHHCCCCEEEEEEHHHHHHHHHHH KIGAEYVLRWLPAGTHDWNKFLKPDEIRGFLAGEPVAVDGPYGVVFNPLTGRWTESVDSD HHHHHHHHHHCCCCCCCHHHCCCCHHHHHEECCCCEEECCCCCEEECCCCCCHHHHHCCC VNYMMTVVRPAA HHEEEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA