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The map label for this gene is flaN [H]

Identifier: 197104256

GI number: 197104256

Start: 870819

End: 872921

Strand: Direct

Name: flaN [H]

Synonym: PHZ_c0790

Alternate gene names: 197104256

Gene position: 870819-872921 (Clockwise)

Preceding gene: 197104251

Following gene: 197104257

Centisome position: 21.79

GC content: 71.42

Gene sequence:

>2103_bases
ATGTCGCTGAACGTCACCCTCCAGACCGCCGCCTCGGGGCTCAACGCCGCCCAGGCGTCCCTGCGCGCGGTCTCGGACAA
CATCGCCAACGTCAACACCCCGGGCTACGTCCGCAAGGCCGTGGTGCAGCAGCCCCTGGTGGTCGACGGCGTCGGCATGG
GCGTCCGCGTCCAGGGCATGAAGCGGATCACCGACGACTATCTCCAGTCGGCGAGCCTGACCGCCGCGTCGGACTCCAGC
CGCTGGGCGGCGGTGGCGCAGTATCTGGACAACGCCCAGAGCCTGTTCGGCGACCCCTCCAGCCCCGGCTTCTTCTTCAG
CCGGCTGGACGAGATCTACGGCGCGTTCGCGACGGCGGCGGACGATCCGTCCTCGAGCCTGCTGCGCAGCCAGTCGATCG
CCAATATCCAGGACTTCCTGGCCGAGGCCGACCGGATCAACAGCCAGCTCAGCGAACTGGGCGGAACCGTCGAGACCCGG
ATCACGGCCGACATCGACCGCGCCAACGACCTGCTCGCCCAGGTCGACCGGCTGAACGCCGAGATCAGCCGGGCGAAGAT
GGTCAACGCCGACGCCTCCGGTTCGGAGAACATCCAGAGCCAGCTCCTCGACGAGCTCTCCAGCCTGATGAACGTGCGCG
TCGCGCGGCGGGCGGAAGGCGGCGTGACGGTGCGCTCCACCGAGGGCGTGCTGCTGGCCGGCGAGGGCGGCTCGGCGACC
CTCAGCTACGTGCGCTCGGATTCCACACCCGGCTACATCAGCGCCAAGCCCTCGGGCGGCGGGACGGACGCCCAGCCGAT
CCAGATCGCGAGCGGGGAGATCCGCGGCCTGATGGACCTGCGCGACCAGGAGCTGCCCAAGCTGCAGGACCAGCTCGGCG
AGTTCCTGACGCGGGCCGTCGACCAGCTCAACGCGGCCCACAACGCCTCCGTCGCCTATCCGGCGCCGAGCACCCTTACC
GGGCGCAACACGGGGCTGGATCTGCCGACCGCCGTCGGCGGCTTCTCGGGCGCGACGACCCTCGCCGTCATGGACGCCAA
TGGCGTGCTCGTGCGCCGGGTGGACGTGGACTTCACCGCCGGCACGATGAGCGCCAACGGCGGCCCGGCCGTGGCCTTCA
CGCCCGGGACCTTCCTCGCCACCCTGAACACCCAGCTCGGCGGCCAGGCGACGGCCTCCTTCACCGGCGGGACGCTTTCG
ATCGCGGGCGCGGGCGCCAACACCCTGGCGGTGGACGAGGGCACGTCCCAGAAGGCCGGCCGCGGCTTCTCGCACTTCTT
CGGCCTGAACGACCTCGTCCGGTCGAACGGCTTCACCAACTACGACACGGGCCTGCGCCCGACCGACCCGCACGGCTTCA
CCGCGGGCGATCCCATCACCCTGCGGCTCTCCAGTCCCGACGGGCTGCCCCTGCGCGACATCACCATCCCGGTGCCCGCC
GGGACCCAGATGAGCGACCTGGTCAACGCCCTGAACAGCAGCGCCACGGGCGTGGGCCTCTACGGCAGCTTCAGCCTGGA
CGCGCAGGGGGCGCTGACCTTCCAGGGCGCGCCGCCGACCAACGCCCAGGTCTCGGTCGTCACCGACAACACCCAGCGCG
GCGCGGGCGGCCCCTCGATCAGCCAGCTCTTCGGCCTGGGCGCGGTGGAGCGCTCCAACCGCGCCGGCCGGTTCCAGGTC
GACGGGACGCTGGACGCCGATCCCACCCGCCTCGCGCTCGGCAAGCTGGACTTCTCGGGCGGCTTCACCCTGCCGGCCAT
CCGGCCCGGCGACGGGCGCGGGGCCCTGGCGCTGTCCCAGGCGGGAGACGTGGCCACGCGCTTCCAGGCCGCCGGCTCGC
TGGGCCAGGTCAACATGACCGTCTCGCGCTACGCCTCGGAGTTCGGGGGCTCGATCGGCCGCAACGCCGCCTCCGCCGAG
ACCCGCAAGGAGAGCGCCGCGGCCGTGCTGAACGAGGCCACCGCCCGCCGCCAGTCGGTCGAAGGCGTCAACCTCGACGA
GGAGCTGGTGAACATGACCACCTATCAGCAGGCCTTCAACGCCTCGGCGCGCATGGTGCAGGCCGCCAAGGACCTCTTCG
ACGTCCTGCTCGGAATGGTGTGA

Upstream 100 bases:

>100_bases
ATTGTTGAGGTTTTCCCGGCGCCTCACGCGCGCGTTCACTCTGATCCCGGCAGAATTGGCCGGGTCGAGGGTGAGCCTTT
GCCGGGCGGAGCGTTAAGCG

Downstream 100 bases:

>100_bases
GGAGACCCTAGATGGTGACCCGCGTCTCGACCCCCGGAAACTACGCCGCCGTGCTGGCCAACCTGCTGGGCGCCCAGCAG
CGCCAGATGCAGGCCGGCGA

Product: flagellar hook-associated protein

Products: NA

Alternate protein names: HAP1 [H]

Number of amino acids: Translated: 700; Mature: 699

Protein sequence:

>700_residues
MSLNVTLQTAASGLNAAQASLRAVSDNIANVNTPGYVRKAVVQQPLVVDGVGMGVRVQGMKRITDDYLQSASLTAASDSS
RWAAVAQYLDNAQSLFGDPSSPGFFFSRLDEIYGAFATAADDPSSSLLRSQSIANIQDFLAEADRINSQLSELGGTVETR
ITADIDRANDLLAQVDRLNAEISRAKMVNADASGSENIQSQLLDELSSLMNVRVARRAEGGVTVRSTEGVLLAGEGGSAT
LSYVRSDSTPGYISAKPSGGGTDAQPIQIASGEIRGLMDLRDQELPKLQDQLGEFLTRAVDQLNAAHNASVAYPAPSTLT
GRNTGLDLPTAVGGFSGATTLAVMDANGVLVRRVDVDFTAGTMSANGGPAVAFTPGTFLATLNTQLGGQATASFTGGTLS
IAGAGANTLAVDEGTSQKAGRGFSHFFGLNDLVRSNGFTNYDTGLRPTDPHGFTAGDPITLRLSSPDGLPLRDITIPVPA
GTQMSDLVNALNSSATGVGLYGSFSLDAQGALTFQGAPPTNAQVSVVTDNTQRGAGGPSISQLFGLGAVERSNRAGRFQV
DGTLDADPTRLALGKLDFSGGFTLPAIRPGDGRGALALSQAGDVATRFQAAGSLGQVNMTVSRYASEFGGSIGRNAASAE
TRKESAAAVLNEATARRQSVEGVNLDEELVNMTTYQQAFNASARMVQAAKDLFDVLLGMV

Sequences:

>Translated_700_residues
MSLNVTLQTAASGLNAAQASLRAVSDNIANVNTPGYVRKAVVQQPLVVDGVGMGVRVQGMKRITDDYLQSASLTAASDSS
RWAAVAQYLDNAQSLFGDPSSPGFFFSRLDEIYGAFATAADDPSSSLLRSQSIANIQDFLAEADRINSQLSELGGTVETR
ITADIDRANDLLAQVDRLNAEISRAKMVNADASGSENIQSQLLDELSSLMNVRVARRAEGGVTVRSTEGVLLAGEGGSAT
LSYVRSDSTPGYISAKPSGGGTDAQPIQIASGEIRGLMDLRDQELPKLQDQLGEFLTRAVDQLNAAHNASVAYPAPSTLT
GRNTGLDLPTAVGGFSGATTLAVMDANGVLVRRVDVDFTAGTMSANGGPAVAFTPGTFLATLNTQLGGQATASFTGGTLS
IAGAGANTLAVDEGTSQKAGRGFSHFFGLNDLVRSNGFTNYDTGLRPTDPHGFTAGDPITLRLSSPDGLPLRDITIPVPA
GTQMSDLVNALNSSATGVGLYGSFSLDAQGALTFQGAPPTNAQVSVVTDNTQRGAGGPSISQLFGLGAVERSNRAGRFQV
DGTLDADPTRLALGKLDFSGGFTLPAIRPGDGRGALALSQAGDVATRFQAAGSLGQVNMTVSRYASEFGGSIGRNAASAE
TRKESAAAVLNEATARRQSVEGVNLDEELVNMTTYQQAFNASARMVQAAKDLFDVLLGMV
>Mature_699_residues
SLNVTLQTAASGLNAAQASLRAVSDNIANVNTPGYVRKAVVQQPLVVDGVGMGVRVQGMKRITDDYLQSASLTAASDSSR
WAAVAQYLDNAQSLFGDPSSPGFFFSRLDEIYGAFATAADDPSSSLLRSQSIANIQDFLAEADRINSQLSELGGTVETRI
TADIDRANDLLAQVDRLNAEISRAKMVNADASGSENIQSQLLDELSSLMNVRVARRAEGGVTVRSTEGVLLAGEGGSATL
SYVRSDSTPGYISAKPSGGGTDAQPIQIASGEIRGLMDLRDQELPKLQDQLGEFLTRAVDQLNAAHNASVAYPAPSTLTG
RNTGLDLPTAVGGFSGATTLAVMDANGVLVRRVDVDFTAGTMSANGGPAVAFTPGTFLATLNTQLGGQATASFTGGTLSI
AGAGANTLAVDEGTSQKAGRGFSHFFGLNDLVRSNGFTNYDTGLRPTDPHGFTAGDPITLRLSSPDGLPLRDITIPVPAG
TQMSDLVNALNSSATGVGLYGSFSLDAQGALTFQGAPPTNAQVSVVTDNTQRGAGGPSISQLFGLGAVERSNRAGRFQVD
GTLDADPTRLALGKLDFSGGFTLPAIRPGDGRGALALSQAGDVATRFQAAGSLGQVNMTVSRYASEFGGSIGRNAASAET
RKESAAAVLNEATARRQSVEGVNLDEELVNMTTYQQAFNASARMVQAAKDLFDVLLGMV

Specific function: Unknown

COG id: COG1256

COG function: function code N; Flagellar hook-associated protein

Gene ontology:

Cell location: Secreted. Bacterial flagellum (By similarity) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the flagella basal body rod proteins family [H]

Homologues:

Organism=Escherichia coli, GI1787323, Length=318, Percent_Identity=24.8427672955975, Blast_Score=74, Evalue=3e-14,

Paralogues:

None

Copy number: 10-20 (rich media) [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010930
- InterPro:   IPR001444
- InterPro:   IPR019776
- InterPro:   IPR002371 [H]

Pfam domain/function: PF06429 DUF1078; PF00460 Flg_bb_rod [H]

EC number: NA

Molecular weight: Translated: 72414; Mature: 72283

Theoretical pI: Translated: 4.53; Mature: 4.53

Prosite motif: PS00588 FLAGELLA_BB_ROD

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSLNVTLQTAASGLNAAQASLRAVSDNIANVNTPGYVRKAVVQQPLVVDGVGMGVRVQGM
CCEEEEEHHHHCCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHCCCCEEECCCCCEEECHH
KRITDDYLQSASLTAASDSSRWAAVAQYLDNAQSLFGDPSSPGFFFSRLDEIYGAFATAA
HHHHHHHHHHCCCEECCCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCC
DDPSSSLLRSQSIANIQDFLAEADRINSQLSELGGTVETRITADIDRANDLLAQVDRLNA
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEECHHHHHHHHHHHHHHHH
EISRAKMVNADASGSENIQSQLLDELSSLMNVRVARRAEGGVTVRSTEGVLLAGEGGSAT
HHHHHHEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCEEEECCCCCEE
LSYVRSDSTPGYISAKPSGGGTDAQPIQIASGEIRGLMDLRDQELPKLQDQLGEFLTRAV
EEEEECCCCCCEEEECCCCCCCCCCCEEECCCCHHHHHHCCHHHHHHHHHHHHHHHHHHH
DQLNAAHNASVAYPAPSTLTGRNTGLDLPTAVGGFSGATTLAVMDANGVLVRRVDVDFTA
HHHHHHCCCEEECCCCCCCCCCCCCCCCCHHHCCCCCCEEEEEEECCCEEEEEEECEEEC
GTMSANGGPAVAFTPGTFLATLNTQLGGQATASFTGGTLSIAGAGANTLAVDEGTSQKAG
CEECCCCCCEEEECCCCEEEEECCCCCCCEEEEECCCEEEEECCCCCEEEECCCCCCCCC
RGFSHFFGLNDLVRSNGFTNYDTGLRPTDPHGFTAGDPITLRLSSPDGLPLRDITIPVPA
CCHHHHHCHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCEEEEEEECCC
GTQMSDLVNALNSSATGVGLYGSFSLDAQGALTFQGAPPTNAQVSVVTDNTQRGAGGPSI
CCCHHHHHHHHCCCCCCEEEEEEECCCCCCEEEECCCCCCCCEEEEEECCCCCCCCCCCH
SQLFGLGAVERSNRAGRFQVDGTLDADPTRLALGKLDFSGGFTLPAIRPGDGRGALALSQ
HHHHCCCCHHCCCCCCEEEECCCCCCCCCEEEEEEEECCCCEECCEECCCCCCCEEEECC
AGDVATRFQAAGSLGQVNMTVSRYASEFGGSIGRNAASAETRKESAAAVLNEATARRQSV
CCCHHHHHHHCCCCCEEEHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHC
EGVNLDEELVNMTTYQQAFNASARMVQAAKDLFDVLLGMV
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
SLNVTLQTAASGLNAAQASLRAVSDNIANVNTPGYVRKAVVQQPLVVDGVGMGVRVQGM
CEEEEEHHHHCCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHCCCCEEECCCCCEEECHH
KRITDDYLQSASLTAASDSSRWAAVAQYLDNAQSLFGDPSSPGFFFSRLDEIYGAFATAA
HHHHHHHHHHCCCEECCCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCC
DDPSSSLLRSQSIANIQDFLAEADRINSQLSELGGTVETRITADIDRANDLLAQVDRLNA
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEECHHHHHHHHHHHHHHHH
EISRAKMVNADASGSENIQSQLLDELSSLMNVRVARRAEGGVTVRSTEGVLLAGEGGSAT
HHHHHHEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCEEEECCCCCEE
LSYVRSDSTPGYISAKPSGGGTDAQPIQIASGEIRGLMDLRDQELPKLQDQLGEFLTRAV
EEEEECCCCCCEEEECCCCCCCCCCCEEECCCCHHHHHHCCHHHHHHHHHHHHHHHHHHH
DQLNAAHNASVAYPAPSTLTGRNTGLDLPTAVGGFSGATTLAVMDANGVLVRRVDVDFTA
HHHHHHCCCEEECCCCCCCCCCCCCCCCCHHHCCCCCCEEEEEEECCCEEEEEEECEEEC
GTMSANGGPAVAFTPGTFLATLNTQLGGQATASFTGGTLSIAGAGANTLAVDEGTSQKAG
CEECCCCCCEEEECCCCEEEEECCCCCCCEEEEECCCEEEEECCCCCEEEECCCCCCCCC
RGFSHFFGLNDLVRSNGFTNYDTGLRPTDPHGFTAGDPITLRLSSPDGLPLRDITIPVPA
CCHHHHHCHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCEEEEEEECCC
GTQMSDLVNALNSSATGVGLYGSFSLDAQGALTFQGAPPTNAQVSVVTDNTQRGAGGPSI
CCCHHHHHHHHCCCCCCEEEEEEECCCCCCEEEECCCCCCCCEEEEEECCCCCCCCCCCH
SQLFGLGAVERSNRAGRFQVDGTLDADPTRLALGKLDFSGGFTLPAIRPGDGRGALALSQ
HHHHCCCCHHCCCCCCEEEECCCCCCCCCEEEEEEEECCCCEECCEECCCCCCCEEEECC
AGDVATRFQAAGSLGQVNMTVSRYASEFGGSIGRNAASAETRKESAAAVLNEATARRQSV
CCCHHHHHHHCCCCCEEEHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHC
EGVNLDEELVNMTTYQQAFNASARMVQAAKDLFDVLLGMV
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 11677608; 12644504 [H]