| Definition | Phenylobacterium zucineum HLK1, complete genome. |
|---|---|
| Accession | NC_011144 |
| Length | 3,996,255 |
Click here to switch to the map view.
The map label for this gene is 197104215
Identifier: 197104215
GI number: 197104215
Start: 821072
End: 822070
Strand: Direct
Name: 197104215
Synonym: PHZ_c0749
Alternate gene names: NA
Gene position: 821072-822070 (Clockwise)
Preceding gene: 197104214
Following gene: 197104220
Centisome position: 20.55
GC content: 69.17
Gene sequence:
>999_bases ATGGCGCTCAAGACCCGTTTCACCGAGACCTTCGGGGTCGAGCACCCCATCGTGCAGGGGGGCATGCAGTGGGTCGGCCG CGCCGAACTGGTGGCGGCGGTGGCCAACGCCGGCGGCCTGGGCTTCATCACCGCGCTGACGCAGCCGACGCCGGACGACC TGCGCCGCGAGATCGAGCGCTGCCAGAAGCTGACGGACAAGCCGTTCGGGGTGAACCTGACGATCCTGCCGGCGATCACG CCGCCGCCGTACGCCGAGTACCGGCAGGCGATCATCGACTCGGGGGTGAAGATCGTCGAGACGGCCGGCTACAAGCCGCA GGAGCACGTCGACCACTTCAAGGAGCACGGGATCAAGGTGATCCACAAGTGCACGGCGGTCCGCCACGCGCTGTCGGCCG AGCGGATGGGCGTGGACGCGATCTCCATCGACGGCTTCGAGTGCGCGGGCCATCCGGGCGAGGACGACATCCCGGGCCTG ATCCTGATCCCGGCGGCGGCCGACAAGGTGAAGATCCCGATGATCGCCTCGGGCGGCTTCGGCGACGCGCGCGGCCTGGT GGCGGCCCTGGCGCTGGGCGCCGACGGGGTGAACATGGGCACGCGCTTCATGTGCACCGCCGAGAGCCCGATCCACCAGA AGGTGAAGGAGCAGATCGTCGCCAACGACGAGCGGCAGACCAACCTGATCTTCCGCACGATGCACAACACCGCACGGGTG GCGAAGAACGCGGTCTCGGACGAGGTGGTGGCCATAGAGCGGCGCGGCGGGGCCAAGTTCGAGGACGTGAAGGACCTGGT GGCCGGCGCCCGCGGCAAGGTCGTCTACGAACAGGGCGACCCCGACTACGGCATCTGGTCGGCCGGCATGGTCCAGGGCC TGATCCACGACATTCCGACCTGCGCCGAGCTGATCCACCGCATGGTGCGCGAGGCCGAGGAGATCATCGAGGGGCGCCTG GCCCGCATGGTCGGCCACAAGAGCCTCCAGCCGGCCTGA
Upstream 100 bases:
>100_bases ACGCCATCGGCCGCTCGGGGCTGCAGTAGCTCAAGCCCTTGCCTGACGTGGCGTCTGCCGCTTCAGTGTCCTCCAAACAT CTGTTTGGAGGCGACGACCC
Downstream 100 bases:
>100_bases TCCCTCCCGACAGCCTCCGAAAACAAGAGAGCCGCCGGATCGCTCCGGCGGCTCTTTCGCTCTCCATGGCGCCGCCCGGA CCCGAAGGCCCGGGCGGTCG
Product: 2-nitropropane_dioxygenase
Products: NA
Alternate protein names: Nitroalkane oxidase [H]
Number of amino acids: Translated: 332; Mature: 331
Protein sequence:
>332_residues MALKTRFTETFGVEHPIVQGGMQWVGRAELVAAVANAGGLGFITALTQPTPDDLRREIERCQKLTDKPFGVNLTILPAIT PPPYAEYRQAIIDSGVKIVETAGYKPQEHVDHFKEHGIKVIHKCTAVRHALSAERMGVDAISIDGFECAGHPGEDDIPGL ILIPAAADKVKIPMIASGGFGDARGLVAALALGADGVNMGTRFMCTAESPIHQKVKEQIVANDERQTNLIFRTMHNTARV AKNAVSDEVVAIERRGGAKFEDVKDLVAGARGKVVYEQGDPDYGIWSAGMVQGLIHDIPTCAELIHRMVREAEEIIEGRL ARMVGHKSLQPA
Sequences:
>Translated_332_residues MALKTRFTETFGVEHPIVQGGMQWVGRAELVAAVANAGGLGFITALTQPTPDDLRREIERCQKLTDKPFGVNLTILPAIT PPPYAEYRQAIIDSGVKIVETAGYKPQEHVDHFKEHGIKVIHKCTAVRHALSAERMGVDAISIDGFECAGHPGEDDIPGL ILIPAAADKVKIPMIASGGFGDARGLVAALALGADGVNMGTRFMCTAESPIHQKVKEQIVANDERQTNLIFRTMHNTARV AKNAVSDEVVAIERRGGAKFEDVKDLVAGARGKVVYEQGDPDYGIWSAGMVQGLIHDIPTCAELIHRMVREAEEIIEGRL ARMVGHKSLQPA >Mature_331_residues ALKTRFTETFGVEHPIVQGGMQWVGRAELVAAVANAGGLGFITALTQPTPDDLRREIERCQKLTDKPFGVNLTILPAITP PPYAEYRQAIIDSGVKIVETAGYKPQEHVDHFKEHGIKVIHKCTAVRHALSAERMGVDAISIDGFECAGHPGEDDIPGLI LIPAAADKVKIPMIASGGFGDARGLVAALALGADGVNMGTRFMCTAESPIHQKVKEQIVANDERQTNLIFRTMHNTARVA KNAVSDEVVAIERRGGAKFEDVKDLVAGARGKVVYEQGDPDYGIWSAGMVQGLIHDIPTCAELIHRMVREAEEIIEGRLA RMVGHKSLQPA
Specific function: Catalyzes the oxidative denitrification of nitronates to their corresponding aldehydes and nitrites [H]
COG id: COG2070
COG function: function code R; Dioxygenases related to 2-nitropropane dioxygenase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the nitronate monooxygenase family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004136 - InterPro: IPR013785 [H]
Pfam domain/function: PF03060 NPD [H]
EC number: =1.13.12.16 [H]
Molecular weight: Translated: 35892; Mature: 35761
Theoretical pI: Translated: 6.51; Mature: 6.51
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MALKTRFTETFGVEHPIVQGGMQWVGRAELVAAVANAGGLGFITALTQPTPDDLRREIER CCCCCCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCHHHHHHHHHH CQKLTDKPFGVNLTILPAITPPPYAEYRQAIIDSGVKIVETAGYKPQEHVDHFKEHGIKV HHHHCCCCCCCEEEEEECCCCCCHHHHHHHHHHCCCEEEECCCCCCHHHHHHHHHCCHHH IHKCTAVRHALSAERMGVDAISIDGFECAGHPGEDDIPGLILIPAAADKVKIPMIASGGF HHHHHHHHHHHHHHHCCCCEEEECCEECCCCCCCCCCCCEEEEECCCCCEEEEEEECCCC GDARGLVAALALGADGVNMGTRFMCTAESPIHQKVKEQIVANDERQTNLIFRTMHNTARV CHHHHHHHHHHHCCCCCCCCCEEEEECCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHH AKNAVSDEVVAIERRGGAKFEDVKDLVAGARGKVVYEQGDPDYGIWSAGMVQGLIHDIPT HHHHHCCCEEEEECCCCCCHHHHHHHHCCCCCCEEEECCCCCCCCHHHHHHHHHHHCCHH CAELIHRMVREAEEIIEGRLARMVGHKSLQPA HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC >Mature Secondary Structure ALKTRFTETFGVEHPIVQGGMQWVGRAELVAAVANAGGLGFITALTQPTPDDLRREIER CCCCCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCHHHHHHHHHH CQKLTDKPFGVNLTILPAITPPPYAEYRQAIIDSGVKIVETAGYKPQEHVDHFKEHGIKV HHHHCCCCCCCEEEEEECCCCCCHHHHHHHHHHCCCEEEECCCCCCHHHHHHHHHCCHHH IHKCTAVRHALSAERMGVDAISIDGFECAGHPGEDDIPGLILIPAAADKVKIPMIASGGF HHHHHHHHHHHHHHHCCCCEEEECCEECCCCCCCCCCCCEEEEECCCCCEEEEEEECCCC GDARGLVAALALGADGVNMGTRFMCTAESPIHQKVKEQIVANDERQTNLIFRTMHNTARV CHHHHHHHHHHHCCCCCCCCCEEEEECCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHH AKNAVSDEVVAIERRGGAKFEDVKDLVAGARGKVVYEQGDPDYGIWSAGMVQGLIHDIPT HHHHHCCCEEEEECCCCCCHHHHHHHHCCCCCCEEEECCCCCCCCHHHHHHHHHHHCCHH CAELIHRMVREAEEIIEGRLARMVGHKSLQPA HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 10984043 [H]