| Definition | Phenylobacterium zucineum HLK1, complete genome. |
|---|---|
| Accession | NC_011144 |
| Length | 3,996,255 |
Click here to switch to the map view.
The map label for this gene is 197104187
Identifier: 197104187
GI number: 197104187
Start: 792150
End: 793058
Strand: Direct
Name: 197104187
Synonym: PHZ_c0721
Alternate gene names: NA
Gene position: 792150-793058 (Clockwise)
Preceding gene: 197104186
Following gene: 197104188
Centisome position: 19.82
GC content: 77.01
Gene sequence:
>909_bases ATGGCGACTGACCTGCTGGAGGCCCTGGCCCGCGCCAACCTGGCGGGCTCGCTGGTGCTCATCCTCGTCATGCTGCTGCG GGTCCCCGCGCGCCGGCTGTTCGGCGCCGAGGCGGCCTACATGCTCTGGGCGGCGCCGGTCGGCGCGGCCCTGCTCAGCC TCGCCCCCTGGCCCTTCGGCAATCCCTGGCCCGGCGCCGAGCGGATGACGCTCCGGCCGCTGGTCGAGGCCGCCGCGGGC CTGGACGCCCTCGCCGCCGTCTGGGCCGTGGGCGCGGCCGTGGGCGTGGCGCTCGCGTGGCGGGCGCAGGCGGCGTTCGA GCGCGACGCCCGCGCCGGGCGCGCCGGCCCCGCGGTCTCGGGTTTCATCAGCCCCCGGGTGATCATGCCCGCCGCCGACC CGTACTCCGACGAGGAGCGGGTGCTGATCCGGGCGCACGAGCGCGAGCACGTGCGCCGGGGCGATCCCAAGGCGAACGCC CTGGCCGCCGCCCTGCAGGTGGTGTTCTGGTTCAACCCGCTGGCGCACGCCGGCGCGCGGACGATGCGGATCGACCAGGA GCTGGCCTGCGACGCGGCCACCCTGCGCCGCTTCCCGAAGGCCCGCCGGACCTACGCCGAGGCGCTGCTGAAGACCGAGC TCGCCCGCGGCGCCCTGCCGTTCGGCTGCCGCTGGCCCGCCGCCGGGGCCCATCCGCTGGAGGTGCGCCTGGCCGCGCTG AAGGGGGGACCGCGCCATGACCTGATGGGCGCCTGGACCGCGATCGTCCTGACCCTCGCCGCCAGCACCCTGACCTGGGC GGCCAAGCCCCCGGTGCCCGAGCCGCCGGACAGGCCGCCGCCGGCCGACGACCAGCCCGCCATGTCGGTGATGCTGATCA GCGTTCCGGCCCCTGCGCCGACTCGTTAA
Upstream 100 bases:
>100_bases TCCGGCCAGGTGGCGCCGCTGGTGGCCCACTTCGCCGAGCACCGGGCGCTGTCGCCCGAGGACGTCGCCCGGCTGAAGCG CCTGATCGCGGAGCTGGACG
Downstream 100 bases:
>100_bases GGGAAGCGGCGGGACGTCGCGAACACGCGCGAAACGAATCATGTCCGAATCACTGACTCGGGCCGATTCAGTCTTTGTTC CCTACGAGATATGGTGGCTG
Product: hypothetical protein
Products: NA
Alternate protein names: NB-Like Protein; Transcriptional Regulator; NB Family Protein; Peptidase M; Antirepressor Regulating Drug Resistance Protein
Number of amino acids: Translated: 302; Mature: 301
Protein sequence:
>302_residues MATDLLEALARANLAGSLVLILVMLLRVPARRLFGAEAAYMLWAAPVGAALLSLAPWPFGNPWPGAERMTLRPLVEAAAG LDALAAVWAVGAAVGVALAWRAQAAFERDARAGRAGPAVSGFISPRVIMPAADPYSDEERVLIRAHEREHVRRGDPKANA LAAALQVVFWFNPLAHAGARTMRIDQELACDAATLRRFPKARRTYAEALLKTELARGALPFGCRWPAAGAHPLEVRLAAL KGGPRHDLMGAWTAIVLTLAASTLTWAAKPPVPEPPDRPPPADDQPAMSVMLISVPAPAPTR
Sequences:
>Translated_302_residues MATDLLEALARANLAGSLVLILVMLLRVPARRLFGAEAAYMLWAAPVGAALLSLAPWPFGNPWPGAERMTLRPLVEAAAG LDALAAVWAVGAAVGVALAWRAQAAFERDARAGRAGPAVSGFISPRVIMPAADPYSDEERVLIRAHEREHVRRGDPKANA LAAALQVVFWFNPLAHAGARTMRIDQELACDAATLRRFPKARRTYAEALLKTELARGALPFGCRWPAAGAHPLEVRLAAL KGGPRHDLMGAWTAIVLTLAASTLTWAAKPPVPEPPDRPPPADDQPAMSVMLISVPAPAPTR >Mature_301_residues ATDLLEALARANLAGSLVLILVMLLRVPARRLFGAEAAYMLWAAPVGAALLSLAPWPFGNPWPGAERMTLRPLVEAAAGL DALAAVWAVGAAVGVALAWRAQAAFERDARAGRAGPAVSGFISPRVIMPAADPYSDEERVLIRAHEREHVRRGDPKANAL AAALQVVFWFNPLAHAGARTMRIDQELACDAATLRRFPKARRTYAEALLKTELARGALPFGCRWPAAGAHPLEVRLAALK GGPRHDLMGAWTAIVLTLAASTLTWAAKPPVPEPPDRPPPADDQPAMSVMLISVPAPAPTR
Specific function: Unknown
COG id: COG4219
COG function: function code KT; Antirepressor regulating drug resistance, predicted signal transduction N-terminal membrane component
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 32136; Mature: 32005
Theoretical pI: Translated: 10.49; Mature: 10.49
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MATDLLEALARANLAGSLVLILVMLLRVPARRLFGAEAAYMLWAAPVGAALLSLAPWPFG CHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCC NPWPGAERMTLRPLVEAAAGLDALAAVWAVGAAVGVALAWRAQAAFERDARAGRAGPAVS CCCCCCCCHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHH GFISPRVIMPAADPYSDEERVLIRAHEREHVRRGDPKANALAAALQVVFWFNPLAHAGAR HCCCCEEEECCCCCCCCCCEEEEEEHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCH TMRIDQELACDAATLRRFPKARRTYAEALLKTELARGALPFGCRWPAAGAHPLEVRLAAL HEECCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHEEEEEC KGGPRHDLMGAWTAIVLTLAASTLTWAAKPPVPEPPDRPPPADDQPAMSVMLISVPAPAP CCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCEEEEEEEECCCCC TR CC >Mature Secondary Structure ATDLLEALARANLAGSLVLILVMLLRVPARRLFGAEAAYMLWAAPVGAALLSLAPWPFG HHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCC NPWPGAERMTLRPLVEAAAGLDALAAVWAVGAAVGVALAWRAQAAFERDARAGRAGPAVS CCCCCCCCHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHH GFISPRVIMPAADPYSDEERVLIRAHEREHVRRGDPKANALAAALQVVFWFNPLAHAGAR HCCCCEEEECCCCCCCCCCEEEEEEHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCH TMRIDQELACDAATLRRFPKARRTYAEALLKTELARGALPFGCRWPAAGAHPLEVRLAAL HEECCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHEEEEEC KGGPRHDLMGAWTAIVLTLAASTLTWAAKPPVPEPPDRPPPADDQPAMSVMLISVPAPAP CCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCEEEEEEEECCCCC TR CC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA