Definition | Hydrogenobaculum sp. Y04AAS1 chromosome, complete genome. |
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Accession | NC_011126 |
Length | 1,559,514 |
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The map label for this gene is thrC [H]
Identifier: 195952702
GI number: 195952702
Start: 282548
End: 283606
Strand: Direct
Name: thrC [H]
Synonym: HY04AAS1_0324
Alternate gene names: 195952702
Gene position: 282548-283606 (Clockwise)
Preceding gene: 195952701
Following gene: 195952717
Centisome position: 18.12
GC content: 40.79
Gene sequence:
>1059_bases ATGGGATATTGGAAAGGACTAATACACGCATATAGAGAATATTTGCCGGTTTCTGAAAAGACACCTATTATAACCCTTTA CGAAGGCAACACGCCTCTTATAAAAGCTCAAAGAATACCAGACATGCTAAAAGTAGGGGTGGAGCTTTATTTTAAGTTTG AAGGCCTAAACCCCACAGGTTCTTTTAAGGATAGAGGCATGACAATGGCTATATCAAAAGCCGCCGAATCTGGTAAAAGA GCCGTTATATGTGCATCCACTGGCAATACCTCAGCTTCGGCTGCTGCTTACGCTGCAAGAGCTGGTATGAAAGCTTTTGT GGTACTTCCAAAAGGTGCTGTAGCTCTTGGTAAACTATCCCAAGCTATCATATACGGTGCCAAGGTAATAGCGCTTCTTG GAAATTTTGATGATGCTTTGTTTATAGTAAGAAAAATAGGTGAGATATTACCAGTAGAAGTGGTAAATTCTGTAAACCCT TATCGTATAGAAGGTCAAAAAACCGCTGCCTTTGAAATAGTAGATGCTTTAGGGGATGCTCCCACTTATCATTTTATACC TGTTGGAAACGCTGGTAACATAACAGCCTATTGGAAAGGTTATAAAGAGTATCATGCTATAGGAAAATCAAAAAAACTTC CCATTATGATGGGTTATCAGGCAGAAGGATCGGCTCCTATAGTAAAAGGTTATCCTATAAAAAACCCTCAAACCATAGCC ACCGCTATAAAAATAGGCAATCCTTACAGCTGGAGAAATGCCATCCAAGCCGCCAAAGAATCAAACGGTAAAATTGATGC GGTTACCGATGATGAGATACTTTACGCTTACAACCTTGTGGCTTCTTGTGAAGGGGTTTTTTGTGAACCAGCTTCCGCTG CATCTGTGGCAGGCTTTATTAAAAGCGCCAAAGAAGGTATTTTTAAAGAAGGCGATGTGGTAGTCTGCACATTGACGGGT TCTGGCTTAAAAGACCCAGATACCGCTATGAAATCCGCCCAAAGCCCTATAGAAGTACCTCCAGATTTAAACCAGGTTTT GAAGCTTATAGAGATTTAA
Upstream 100 bases:
>100_bases AGAAGAGATAAGACAAAAGATAGGATAACAGTTTTTGTAGAAAAGGTGTAAGTCTCTTTTATGTATATAAAACATAAACG GTGTGGTAAAATATTTGGAT
Downstream 100 bases:
>100_bases AGCTTTTCTATTATAATGTCTCCGTAGTGTTCTTTTTGATATATATCTGCATGTTTGTCGTATTGGATAAACATAAGGGC TGTAAATTGGACTGAGGCTT
Product: threonine synthase
Products: NA
Alternate protein names: TS [H]
Number of amino acids: Translated: 352; Mature: 351
Protein sequence:
>352_residues MGYWKGLIHAYREYLPVSEKTPIITLYEGNTPLIKAQRIPDMLKVGVELYFKFEGLNPTGSFKDRGMTMAISKAAESGKR AVICASTGNTSASAAAYAARAGMKAFVVLPKGAVALGKLSQAIIYGAKVIALLGNFDDALFIVRKIGEILPVEVVNSVNP YRIEGQKTAAFEIVDALGDAPTYHFIPVGNAGNITAYWKGYKEYHAIGKSKKLPIMMGYQAEGSAPIVKGYPIKNPQTIA TAIKIGNPYSWRNAIQAAKESNGKIDAVTDDEILYAYNLVASCEGVFCEPASAASVAGFIKSAKEGIFKEGDVVVCTLTG SGLKDPDTAMKSAQSPIEVPPDLNQVLKLIEI
Sequences:
>Translated_352_residues MGYWKGLIHAYREYLPVSEKTPIITLYEGNTPLIKAQRIPDMLKVGVELYFKFEGLNPTGSFKDRGMTMAISKAAESGKR AVICASTGNTSASAAAYAARAGMKAFVVLPKGAVALGKLSQAIIYGAKVIALLGNFDDALFIVRKIGEILPVEVVNSVNP YRIEGQKTAAFEIVDALGDAPTYHFIPVGNAGNITAYWKGYKEYHAIGKSKKLPIMMGYQAEGSAPIVKGYPIKNPQTIA TAIKIGNPYSWRNAIQAAKESNGKIDAVTDDEILYAYNLVASCEGVFCEPASAASVAGFIKSAKEGIFKEGDVVVCTLTG SGLKDPDTAMKSAQSPIEVPPDLNQVLKLIEI >Mature_351_residues GYWKGLIHAYREYLPVSEKTPIITLYEGNTPLIKAQRIPDMLKVGVELYFKFEGLNPTGSFKDRGMTMAISKAAESGKRA VICASTGNTSASAAAYAARAGMKAFVVLPKGAVALGKLSQAIIYGAKVIALLGNFDDALFIVRKIGEILPVEVVNSVNPY RIEGQKTAAFEIVDALGDAPTYHFIPVGNAGNITAYWKGYKEYHAIGKSKKLPIMMGYQAEGSAPIVKGYPIKNPQTIAT AIKIGNPYSWRNAIQAAKESNGKIDAVTDDEILYAYNLVASCEGVFCEPASAASVAGFIKSAKEGIFKEGDVVVCTLTGS GLKDPDTAMKSAQSPIEVPPDLNQVLKLIEI
Specific function: Catalyzes the gamma-elimination of phosphate from L- phosphohomoserine and the beta-addition of water to produce L- threonine [H]
COG id: COG0498
COG function: function code E; Threonine synthase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the threonine synthase family [H]
Homologues:
Organism=Escherichia coli, GI2367138, Length=291, Percent_Identity=28.8659793814433, Blast_Score=72, Evalue=5e-14, Organism=Escherichia coli, GI1789505, Length=137, Percent_Identity=34.3065693430657, Blast_Score=65, Evalue=1e-11, Organism=Saccharomyces cerevisiae, GI6322631, Length=311, Percent_Identity=24.7588424437299, Blast_Score=64, Evalue=4e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001926 - InterPro: IPR000634 - InterPro: IPR004450 [H]
Pfam domain/function: PF00291 PALP [H]
EC number: =4.2.3.1 [H]
Molecular weight: Translated: 37667; Mature: 37536
Theoretical pI: Translated: 8.92; Mature: 8.92
Prosite motif: PS00165 DEHYDRATASE_SER_THR
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGYWKGLIHAYREYLPVSEKTPIITLYEGNTPLIKAQRIPDMLKVGVELYFKFEGLNPTG CCHHHHHHHHHHHHCCCCCCCCEEEEEECCCCEEEHHCCHHHHHCCEEEEEEEECCCCCC SFKDRGMTMAISKAAESGKRAVICASTGNTSASAAAYAARAGMKAFVVLPKGAVALGKLS CCCCCCEEEEEEHHHCCCCEEEEEEECCCCCHHHHHHHHHCCCEEEEEECCCCHHHHHHH QAIIYGAKVIALLGNFDDALFIVRKIGEILPVEVVNSVNPYRIEGQKTAAFEIVDALGDA HHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCHHHHCCCCCEEECCCCHHHHHHHHHHCCC PTYHFIPVGNAGNITAYWKGYKEYHAIGKSKKLPIMMGYQAEGSAPIVKGYPIKNPQTIA CCEEEEEECCCCCEEEEECCHHHHHHCCCCCCCCEEEEECCCCCCCEEECCCCCCCCEEE TAIKIGNPYSWRNAIQAAKESNGKIDAVTDDEILYAYNLVASCEGVFCEPASAASVAGFI EEEEECCCHHHHHHHHHHHHCCCEEEEECCCCEEEEEEHHHHCCCCEECCCCHHHHHHHH KSAKEGIFKEGDVVVCTLTGSGLKDPDTAMKSAQSPIEVPPDLNQVLKLIEI HHHHHCCCCCCCEEEEEEECCCCCCHHHHHHHCCCCCCCCCCHHHHHHHHCC >Mature Secondary Structure GYWKGLIHAYREYLPVSEKTPIITLYEGNTPLIKAQRIPDMLKVGVELYFKFEGLNPTG CHHHHHHHHHHHHCCCCCCCCEEEEEECCCCEEEHHCCHHHHHCCEEEEEEEECCCCCC SFKDRGMTMAISKAAESGKRAVICASTGNTSASAAAYAARAGMKAFVVLPKGAVALGKLS CCCCCCEEEEEEHHHCCCCEEEEEEECCCCCHHHHHHHHHCCCEEEEEECCCCHHHHHHH QAIIYGAKVIALLGNFDDALFIVRKIGEILPVEVVNSVNPYRIEGQKTAAFEIVDALGDA HHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCHHHHCCCCCEEECCCCHHHHHHHHHHCCC PTYHFIPVGNAGNITAYWKGYKEYHAIGKSKKLPIMMGYQAEGSAPIVKGYPIKNPQTIA CCEEEEEECCCCCEEEEECCHHHHHHCCCCCCCCEEEEECCCCCCCEEECCCCCCCCEEE TAIKIGNPYSWRNAIQAAKESNGKIDAVTDDEILYAYNLVASCEGVFCEPASAASVAGFI EEEEECCCHHHHHHHHHHHHCCCEEEEECCCCEEEEEEHHHHCCCCEECCCCHHHHHHHH KSAKEGIFKEGDVVVCTLTGSGLKDPDTAMKSAQSPIEVPPDLNQVLKLIEI HHHHHCCCCCCCEEEEEEECCCCCCHHHHHHHCCCCCCCCCCHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 3098560; 9384377; 3139660 [H]