Definition Hydrogenobaculum sp. Y04AAS1 chromosome, complete genome.
Accession NC_011126
Length 1,559,514

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The map label for this gene is 195952690

Identifier: 195952690

GI number: 195952690

Start: 272640

End: 273530

Strand: Direct

Name: 195952690

Synonym: HY04AAS1_0312

Alternate gene names: NA

Gene position: 272640-273530 (Clockwise)

Preceding gene: 195952689

Following gene: 195952696

Centisome position: 17.48

GC content: 33.33

Gene sequence:

>891_bases
ATGATTGATGCTTTTAACTCTTCTTGGGACAGCGATAAAATAAACGAAAACCAATGGGAAGAGACAGCGCAAGGTATAGA
TGAATATATAGAGACCTCTCATTGGACTCTTATAGAGGTTAAAGATTTTGATATTTCCGATGACATAGCTTTTCTTGATG
GTATAGTAAGACTTGATAGTGAAATTTTTTATAAAGAAAACAAGGCTAGGTGTAGGTTGTTTAGTTTGGCAAGTGGTATA
TGTGAGATGAAGCCCAATTTTTATAACGATTTTGAGGCTTTTAAAAGCATAAAAACAAAGAAAATAGCAATACCAGACAA
AGAAATACCAAAAAACCAAATCATTGTAAAAAACGCAAGATACGATTTGGTATCTAAAGACCAGGACCATCTTATTTTGT
TAAAACAATTAGAATACGAAACTTTAATAGATTATATAAAGCATTCACATACAAGATTTATAATATGGGATGGCTCGTTA
CCTATTACATTTTCAGGCTTGGGCAATGAGCTGGTGTTTGGGTTTATTAAATCTCACAGAAAATATTTTGTAAATCCTCA
AAACTTGGAGCTTTTGTATGAAATAAAGGCTTTTCAAAGAACACCTATTATACACTACACAAGTCAAGACCAAAAAAACT
TTTACTACACTTGGTATACCACATTAAACAACGATATAACTGGGCTTGTTAGAATTGAGACGCTGGCAAGTATGGATATA
AAAGAAGCCTCTTATTTGGCTAACGCAATTTGTGTTATTTTAAGAAAGTTTGCATCAAGTCCATTGTATGAACAAAGAGC
TCCTCAAAATTTAGCCCCCATAAGCGCTTTGGAACGCTATCTTAGAGCTTATCTTGGATATTACTTTTTCGATGCTCCGG
TGTTTTCTTGA

Upstream 100 bases:

>100_bases
CGGAAAGAAACACCGCAAAGATTTTAAATATAAAAACCAAATCAGAGTTTGTAAAAAACATTGTAGATAGCTCAAAGCAA
TTTATTAACAGATTTAAGCT

Downstream 100 bases:

>100_bases
TTTTTATAAACTTCCCATAAACATATAGCTCCAGCTGCACTTACATTAAGAGATGTTACTTTGCCTTTCATGGGTATGGA
GACTCTAACATCCGAATGCT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 296; Mature: 296

Protein sequence:

>296_residues
MIDAFNSSWDSDKINENQWEETAQGIDEYIETSHWTLIEVKDFDISDDIAFLDGIVRLDSEIFYKENKARCRLFSLASGI
CEMKPNFYNDFEAFKSIKTKKIAIPDKEIPKNQIIVKNARYDLVSKDQDHLILLKQLEYETLIDYIKHSHTRFIIWDGSL
PITFSGLGNELVFGFIKSHRKYFVNPQNLELLYEIKAFQRTPIIHYTSQDQKNFYYTWYTTLNNDITGLVRIETLASMDI
KEASYLANAICVILRKFASSPLYEQRAPQNLAPISALERYLRAYLGYYFFDAPVFS

Sequences:

>Translated_296_residues
MIDAFNSSWDSDKINENQWEETAQGIDEYIETSHWTLIEVKDFDISDDIAFLDGIVRLDSEIFYKENKARCRLFSLASGI
CEMKPNFYNDFEAFKSIKTKKIAIPDKEIPKNQIIVKNARYDLVSKDQDHLILLKQLEYETLIDYIKHSHTRFIIWDGSL
PITFSGLGNELVFGFIKSHRKYFVNPQNLELLYEIKAFQRTPIIHYTSQDQKNFYYTWYTTLNNDITGLVRIETLASMDI
KEASYLANAICVILRKFASSPLYEQRAPQNLAPISALERYLRAYLGYYFFDAPVFS
>Mature_296_residues
MIDAFNSSWDSDKINENQWEETAQGIDEYIETSHWTLIEVKDFDISDDIAFLDGIVRLDSEIFYKENKARCRLFSLASGI
CEMKPNFYNDFEAFKSIKTKKIAIPDKEIPKNQIIVKNARYDLVSKDQDHLILLKQLEYETLIDYIKHSHTRFIIWDGSL
PITFSGLGNELVFGFIKSHRKYFVNPQNLELLYEIKAFQRTPIIHYTSQDQKNFYYTWYTTLNNDITGLVRIETLASMDI
KEASYLANAICVILRKFASSPLYEQRAPQNLAPISALERYLRAYLGYYFFDAPVFS

Specific function: Unknown

COG id: COG2380

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 34657; Mature: 34657

Theoretical pI: Translated: 5.24; Mature: 5.24

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIDAFNSSWDSDKINENQWEETAQGIDEYIETSHWTLIEVKDFDISDDIAFLDGIVRLDS
CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCEEEEEEECCCCCCCHHHHHHHHHHCC
EIFYKENKARCRLFSLASGICEMKPNFYNDFEAFKSIKTKKIAIPDKEIPKNQIIVKNAR
HHEECCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCEEECCCCCCCCCCEEEECCC
YDLVSKDQDHLILLKQLEYETLIDYIKHSHTRFIIWDGSLPITFSGLGNELVFGFIKSHR
CCCCCCCCCCEEEEHHHHHHHHHHHHHCCCCEEEEECCCCCEEECCCCHHHHHHHHHHCH
KYFVNPQNLELLYEIKAFQRTPIIHYTSQDQKNFYYTWYTTLNNDITGLVRIETLASMDI
HEECCCCCCEEEEEEHHHCCCCEEEECCCCCCEEEEEEEEEECCCCEEEEEEEHHHCCCH
KEASYLANAICVILRKFASSPLYEQRAPQNLAPISALERYLRAYLGYYFFDAPVFS
HHHHHHHHHHHHHHHHHHCCCCHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCC
>Mature Secondary Structure
MIDAFNSSWDSDKINENQWEETAQGIDEYIETSHWTLIEVKDFDISDDIAFLDGIVRLDS
CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCEEEEEEECCCCCCCHHHHHHHHHHCC
EIFYKENKARCRLFSLASGICEMKPNFYNDFEAFKSIKTKKIAIPDKEIPKNQIIVKNAR
HHEECCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCEEECCCCCCCCCCEEEECCC
YDLVSKDQDHLILLKQLEYETLIDYIKHSHTRFIIWDGSLPITFSGLGNELVFGFIKSHR
CCCCCCCCCCEEEEHHHHHHHHHHHHHCCCCEEEEECCCCCEEECCCCHHHHHHHHHHCH
KYFVNPQNLELLYEIKAFQRTPIIHYTSQDQKNFYYTWYTTLNNDITGLVRIETLASMDI
HEECCCCCCEEEEEEHHHCCCCEEEECCCCCCEEEEEEEEEECCCCEEEEEEEHHHCCCH
KEASYLANAICVILRKFASSPLYEQRAPQNLAPISALERYLRAYLGYYFFDAPVFS
HHHHHHHHHHHHHHHHHHCCCCHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA