Definition | Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633 chromosome, complete genome. |
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Accession | NC_011094 |
Length | 4,709,075 |
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The map label for this gene is yhcX [H]
Identifier: 194738362
GI number: 194738362
Start: 3193140
End: 3194018
Strand: Reverse
Name: yhcX [H]
Synonym: SeSA_A3311
Alternate gene names: 194738362
Gene position: 3194018-3193140 (Counterclockwise)
Preceding gene: 194737268
Following gene: 194737725
Centisome position: 67.83
GC content: 43.34
Gene sequence:
>879_bases ATGTCACGTAATTTTACTGTTTCAGCCTGTCAGTATATTGTTACTGAAATAAACACTTTTGAAGATTTCATAACAAAGGT AAGGATACTTCTTAATAAAAGTCAGGGAGCTGATGTCGTTATCTTCCCGGAGCTATTTACCATTGAGCTATTTACACTAT TGAAAAAATGGCAAGAAAGACCCATTTCACACCTTACTTTAATTGATCAGTTCACGGATGCCTATAAGCAGCTTTTTCAA CAGGAAGCGAAAGAAAGAGGACAGTTCATTATTGCTGGCTCTCATCTGGAGCAGACCGGAGCAGATCGCTATGAGAATGT TGCGCATATATGGGGACCCGATGGCGAACATTATGCTCACAGTAAGACGCATATCTTTCCGGCTGAACGGGGTTGGTATA CTCAGGAAGGCGATAAAATGGCTGTTTTTCAACTGCCATTTGCAAAGGTGGGTTTTAATATTTGTTATGAAGCAGAAATA CCGGAGTGTGCCGCGACGCTGGTGGAACAGGGTGTGGAGTTAATTTTAACGCCTTCCGCTACGTTTACTGAACAGGGATT TTGGCGAGTCAGGCATTGTTGCCACGCACGTTGTATTGAAAATCAAATTTATCTTGTTCACTGTTGCCTGGGCGGAAACC CGGGTGGACCACTGCCAGGCTGCTGGGCCCGAAGTTCAATTTTAAGCCCCTGTGATGTCGTGTGGAAAAATCCACAAGGT ATTATCGCAGAGGCGCACGTCAATCAAGAGGATGTCATTTCAGGAGAAATTAACCTCGATGTTCTATATGAAAATAGACT TGGGGGGGCAGCAACAACGTTCAAGGACAGACGCAGAAAAGCAGGCATATATAATATCTGGCCATCACACATTAAATAA
Upstream 100 bases:
>100_bases GCTTCACAAAAAATAACCTGATGTCGTAATGCCCACTCCCTAATATTCTCCATGCGCTATACGTTAATTTAAGTTTAAAT TTCATGCTGGGGATATCACG
Downstream 100 bases:
>100_bases CAGAATGTGTCCCTTCTATGTATTAGCTGGAGGTCGTTATGGGATATTTAAAATTACCTGAGGGTAAAAGGATTGCGGTC AATCTTGGTGTCGATGTAGA
Product: putative amidohydrolase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 292; Mature: 291
Protein sequence:
>292_residues MSRNFTVSACQYIVTEINTFEDFITKVRILLNKSQGADVVIFPELFTIELFTLLKKWQERPISHLTLIDQFTDAYKQLFQ QEAKERGQFIIAGSHLEQTGADRYENVAHIWGPDGEHYAHSKTHIFPAERGWYTQEGDKMAVFQLPFAKVGFNICYEAEI PECAATLVEQGVELILTPSATFTEQGFWRVRHCCHARCIENQIYLVHCCLGGNPGGPLPGCWARSSILSPCDVVWKNPQG IIAEAHVNQEDVISGEINLDVLYENRLGGAATTFKDRRRKAGIYNIWPSHIK
Sequences:
>Translated_292_residues MSRNFTVSACQYIVTEINTFEDFITKVRILLNKSQGADVVIFPELFTIELFTLLKKWQERPISHLTLIDQFTDAYKQLFQ QEAKERGQFIIAGSHLEQTGADRYENVAHIWGPDGEHYAHSKTHIFPAERGWYTQEGDKMAVFQLPFAKVGFNICYEAEI PECAATLVEQGVELILTPSATFTEQGFWRVRHCCHARCIENQIYLVHCCLGGNPGGPLPGCWARSSILSPCDVVWKNPQG IIAEAHVNQEDVISGEINLDVLYENRLGGAATTFKDRRRKAGIYNIWPSHIK >Mature_291_residues SRNFTVSACQYIVTEINTFEDFITKVRILLNKSQGADVVIFPELFTIELFTLLKKWQERPISHLTLIDQFTDAYKQLFQQ EAKERGQFIIAGSHLEQTGADRYENVAHIWGPDGEHYAHSKTHIFPAERGWYTQEGDKMAVFQLPFAKVGFNICYEAEIP ECAATLVEQGVELILTPSATFTEQGFWRVRHCCHARCIENQIYLVHCCLGGNPGGPLPGCWARSSILSPCDVVWKNPQGI IAEAHVNQEDVISGEINLDVLYENRLGGAATTFKDRRRKAGIYNIWPSHIK
Specific function: Unknown
COG id: COG0388
COG function: function code R; Predicted amidohydrolase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 1 N-acetyltransferase domain [H]
Homologues:
Organism=Homo sapiens, GI9910460, Length=275, Percent_Identity=23.2727272727273, Blast_Score=67, Evalue=2e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000182 - InterPro: IPR016181 - InterPro: IPR003010 - InterPro: IPR001110 [H]
Pfam domain/function: PF00583 Acetyltransf_1; PF00795 CN_hydrolase [H]
EC number: NA
Molecular weight: Translated: 33134; Mature: 33003
Theoretical pI: Translated: 6.28; Mature: 6.28
Prosite motif: PS50263 CN_HYDROLASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.4 %Cys (Translated Protein) 0.7 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 3.4 %Cys (Mature Protein) 0.3 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSRNFTVSACQYIVTEINTFEDFITKVRILLNKSQGADVVIFPELFTIELFTLLKKWQER CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEECHHHHHHHHHHHHHHHHC PISHLTLIDQFTDAYKQLFQQEAKERGQFIIAGSHLEQTGADRYENVAHIWGPDGEHYAH CCHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCHHHHCEEEEECCCCCCCCC SKTHIFPAERGWYTQEGDKMAVFQLPFAKVGFNICYEAEIPECAATLVEQGVELILTPSA CCCEEECCCCCCCCCCCCEEEEEECCHHHHCCEEEEECCCCHHHHHHHHCCCEEEECCCC TFTEQGFWRVRHCCHARCIENQIYLVHCCLGGNPGGPLPGCWARSSILSPCDVVWKNPQG CCCHHHHHHHHHHHHHHHHCCCEEEEEEEECCCCCCCCCCCHHHHHCCCCCHHEEECCCC IIAEAHVNQEDVISGEINLDVLYENRLGGAATTFKDRRRKAGIYNIWPSHIK EEEEECCCHHHEEECCEEEEEEEECCCCCCHHHHHHHHHHCCEEECCCCCCC >Mature Secondary Structure SRNFTVSACQYIVTEINTFEDFITKVRILLNKSQGADVVIFPELFTIELFTLLKKWQER CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEECHHHHHHHHHHHHHHHHC PISHLTLIDQFTDAYKQLFQQEAKERGQFIIAGSHLEQTGADRYENVAHIWGPDGEHYAH CCHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCHHHHCEEEEECCCCCCCCC SKTHIFPAERGWYTQEGDKMAVFQLPFAKVGFNICYEAEIPECAATLVEQGVELILTPSA CCCEEECCCCCCCCCCCCEEEEEECCHHHHCCEEEEECCCCHHHHHHHHCCCEEEECCCC TFTEQGFWRVRHCCHARCIENQIYLVHCCLGGNPGGPLPGCWARSSILSPCDVVWKNPQG CCCHHHHHHHHHHHHHHHHCCCEEEEEEEECCCCCCCCCCCHHHHHCCCCCHHEEECCCC IIAEAHVNQEDVISGEINLDVLYENRLGGAATTFKDRRRKAGIYNIWPSHIK EEEEECCCHHHEEECCEEEEEEEECCCCCCHHHHHHHHHHCCEEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8969498; 9384377 [H]