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The map label for this gene is ycaC [H]

Identifier: 194738240

GI number: 194738240

Start: 3840403

End: 3841083

Strand: Direct

Name: ycaC [H]

Synonym: SeSA_A3966

Alternate gene names: 194738240

Gene position: 3840403-3841083 (Clockwise)

Preceding gene: 194738225

Following gene: 194737483

Centisome position: 81.55

GC content: 52.42

Gene sequence:

>681_bases
ATGTCTACACCCGCGAATTTTAACGGTCAACGCCCTGCCATTGATGCTAACGACGCAGTAATGCTGCTGATTGACCACCA
AAGTGGCCTGTTTCAGACCGTCGGCGACATGCCGATGCCGGAATTACGCGCGCGCGCCGCGGCGCTGGCTAAGATCGCTA
CCTTATGCAATATGCCGGTCATTACTACCGCATCCGTACCACAGGGACCGAATGGTCCGCTGATTCCGGAAATCCATGCG
AATGCGCCACACGCGCAATATGTCGCGCGTAAAGGGGAAATTAATGCCTGGGATAATGCCGATTTTGTACAAGCGGTAAA
AGCGACAGGCCGTAAAACGCTGATCATCGCCGGTACTATTACCAGTGTCTGCATGGCTTTTCCAGCCATCAGCGCCGTCG
CGGAAGGTTACAAGGTATTTGCGGTAATTGATGCCTCCGGTACGTACAGTAAAATGGCGCAGGAAATTACGATGGCCCGC
GTGGTGCAGGCGGGCGTAGTACCAATGGATACCGCGGCGGTAGCCTCTGAGCTGCAACGTACCTGGAATAGGGAAGATGC
CGCAGAATGGGCGGATGTATATACCAAAATATTCCCGGCCTATCAGCTACTGATTGAAAGTTATACCAAAGCGCAGGAAG
TAGTAAAAAATAATGAACTGCTGGATTCTCAGCGCGCATAA

Upstream 100 bases:

>100_bases
GGATTACTGTCATCAGCTTAAAAACGGAAATCGCCCCGGCGATTAATGACTTTAACACTGATAGTGATTATCAGTGAAAG
GCAACAACAAGGAATGAATT

Downstream 100 bases:

>100_bases
ATAACGCCCTGAAGCGGCTAAATAGCCCCATTTAATGGGGCTATTTTACTTGCCATTTTGGTCCTGGGCAGTGCTCAAAA
TCCTCACGTACTACGTGTAC

Product: SlsA

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 226; Mature: 225

Protein sequence:

>226_residues
MSTPANFNGQRPAIDANDAVMLLIDHQSGLFQTVGDMPMPELRARAAALAKIATLCNMPVITTASVPQGPNGPLIPEIHA
NAPHAQYVARKGEINAWDNADFVQAVKATGRKTLIIAGTITSVCMAFPAISAVAEGYKVFAVIDASGTYSKMAQEITMAR
VVQAGVVPMDTAAVASELQRTWNREDAAEWADVYTKIFPAYQLLIESYTKAQEVVKNNELLDSQRA

Sequences:

>Translated_226_residues
MSTPANFNGQRPAIDANDAVMLLIDHQSGLFQTVGDMPMPELRARAAALAKIATLCNMPVITTASVPQGPNGPLIPEIHA
NAPHAQYVARKGEINAWDNADFVQAVKATGRKTLIIAGTITSVCMAFPAISAVAEGYKVFAVIDASGTYSKMAQEITMAR
VVQAGVVPMDTAAVASELQRTWNREDAAEWADVYTKIFPAYQLLIESYTKAQEVVKNNELLDSQRA
>Mature_225_residues
STPANFNGQRPAIDANDAVMLLIDHQSGLFQTVGDMPMPELRARAAALAKIATLCNMPVITTASVPQGPNGPLIPEIHAN
APHAQYVARKGEINAWDNADFVQAVKATGRKTLIIAGTITSVCMAFPAISAVAEGYKVFAVIDASGTYSKMAQEITMARV
VQAGVVPMDTAAVASELQRTWNREDAAEWADVYTKIFPAYQLLIESYTKAQEVVKNNELLDSQRA

Specific function: Unknown

COG id: COG1335

COG function: function code Q; Amidases related to nicotinamidase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1787124, Length=195, Percent_Identity=48.2051282051282, Blast_Score=193, Evalue=1e-50,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000868 [H]

Pfam domain/function: PF00857 Isochorismatase [H]

EC number: NA

Molecular weight: Translated: 24306; Mature: 24175

Theoretical pI: Translated: 5.27; Mature: 5.27

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
4.0 %Met     (Translated Protein)
4.9 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSTPANFNGQRPAIDANDAVMLLIDHQSGLFQTVGDMPMPELRARAAALAKIATLCNMPV
CCCCCCCCCCCCCCCCCCEEEEEEECCCCHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCE
ITTASVPQGPNGPLIPEIHANAPHAQYVARKGEINAWDNADFVQAVKATGRKTLIIAGTI
EEECCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCCCHHHHHHHHHCCCEEEEEEHHH
TSVCMAFPAISAVAEGYKVFAVIDASGTYSKMAQEITMARVVQAGVVPMDTAAVASELQR
HHHHHHHHHHHHHHCCEEEEEEEECCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHH
TWNREDAAEWADVYTKIFPAYQLLIESYTKAQEVVKNNELLDSQRA
HHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCCC
>Mature Secondary Structure 
STPANFNGQRPAIDANDAVMLLIDHQSGLFQTVGDMPMPELRARAAALAKIATLCNMPV
CCCCCCCCCCCCCCCCCEEEEEEECCCCHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCE
ITTASVPQGPNGPLIPEIHANAPHAQYVARKGEINAWDNADFVQAVKATGRKTLIIAGTI
EEECCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCCCHHHHHHHHHCCCEEEEEEHHH
TSVCMAFPAISAVAEGYKVFAVIDASGTYSKMAQEITMARVVQAGVVPMDTAAVASELQR
HHHHHHHHHHHHHHCCEEEEEEEECCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHH
TWNREDAAEWADVYTKIFPAYQLLIESYTKAQEVVKNNELLDSQRA
HHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 3062312; 8905232; 9278503; 9782055 [H]