Click here to switch to the map view.

The map label for this gene is yfdX [H]

Identifier: 194738163

GI number: 194738163

Start: 3096648

End: 3097280

Strand: Reverse

Name: yfdX [H]

Synonym: SeSA_A3200

Alternate gene names: 194738163

Gene position: 3097280-3096648 (Counterclockwise)

Preceding gene: 194737697

Following gene: 194734167

Centisome position: 65.77

GC content: 44.71

Gene sequence:

>633_bases
ATGAAAAGCCATATTATACCGGGCGTTGCGCTGATGGTTATCCTGTTTTCAGGAAATGTTATGGCCGCAACAAACATGAC
TGATAATGTTACTCTGAATAATGACAAGATATCCGGACAGGCCTGGCAGGCCATGCGTGATATCGGAATGTCGCGATTCG
AGTTGTTTAATGGTCGAACCCAAAAGGCGGAACAACTGGCTGCGCAAGCAGAAAAACTCCTGAACGATGACAGCACTGAC
TGGAATCTGTATGTCAAATCAGATAAAAAAGCCCCAGTTGAAGGAGACCGCTATATTCGGATAAATTCATCGATTACGGT
AGCCGAAGATTATCTCCCTGCGGGGCAGAAAAATGATGCTATTAATAAAGCAAACCAGAAAATGAAAGAAGGAGATAAAA
AAGGGACTATAGAGGCCCTGAAACTAGCAGGCGTCAGTATGATTGAAAATCAGGAACTCATTCCTCTTCAGCAAACCCGT
AAGGATGTGACCACAGCGCTTTCCTTGATGAACGAAGGAAAATACTATCAGGCAGGTCTGATACTAAAATCAGCTCAGGA
TGGCATAATTGTGGATTCTCAGTCAGTTCAGGAATTACCCACGGCCCCCGTGCAGCACGATTCCGCGCATTAA

Upstream 100 bases:

>100_bases
AGCGGAAGCCTTAATAGCAACGGCTTTAATCTTGGCGTGGGTTACCGGTTCTGAATAGGATAACCCGATAAAAAATGTTA
CTTTGTGGAGATGATGGATT

Downstream 100 bases:

>100_bases
TATCCCCCAGCCTGCTGTATATATTACAGCAGGCAGCATTATGTCTGACAGCTATTACCAGTTTGTTCTGTGCTGTCGGC
ATTGTTTTTAAATTTCATCC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 210; Mature: 210

Protein sequence:

>210_residues
MKSHIIPGVALMVILFSGNVMAATNMTDNVTLNNDKISGQAWQAMRDIGMSRFELFNGRTQKAEQLAAQAEKLLNDDSTD
WNLYVKSDKKAPVEGDRYIRINSSITVAEDYLPAGQKNDAINKANQKMKEGDKKGTIEALKLAGVSMIENQELIPLQQTR
KDVTTALSLMNEGKYYQAGLILKSAQDGIIVDSQSVQELPTAPVQHDSAH

Sequences:

>Translated_210_residues
MKSHIIPGVALMVILFSGNVMAATNMTDNVTLNNDKISGQAWQAMRDIGMSRFELFNGRTQKAEQLAAQAEKLLNDDSTD
WNLYVKSDKKAPVEGDRYIRINSSITVAEDYLPAGQKNDAINKANQKMKEGDKKGTIEALKLAGVSMIENQELIPLQQTR
KDVTTALSLMNEGKYYQAGLILKSAQDGIIVDSQSVQELPTAPVQHDSAH
>Mature_210_residues
MKSHIIPGVALMVILFSGNVMAATNMTDNVTLNNDKISGQAWQAMRDIGMSRFELFNGRTQKAEQLAAQAEKLLNDDSTD
WNLYVKSDKKAPVEGDRYIRINSSITVAEDYLPAGQKNDAINKANQKMKEGDKKGTIEALKLAGVSMIENQELIPLQQTR
KDVTTALSLMNEGKYYQAGLILKSAQDGIIVDSQSVQELPTAPVQHDSAH

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1788719, Length=162, Percent_Identity=46.9135802469136, Blast_Score=156, Evalue=1e-39,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR021236 [H]

Pfam domain/function: PF10938 YfdX [H]

EC number: NA

Molecular weight: Translated: 23095; Mature: 23095

Theoretical pI: Translated: 5.75; Mature: 5.75

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.3 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.3 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKSHIIPGVALMVILFSGNVMAATNMTDNVTLNNDKISGQAWQAMRDIGMSRFELFNGRT
CCCCCCCHHHHHHHHHCCCEEEECCCCCCEEECCCCCCCHHHHHHHHCCHHHHHHHCCCC
QKAEQLAAQAEKLLNDDSTDWNLYVKSDKKAPVEGDRYIRINSSITVAEDYLPAGQKNDA
HHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCCCEEEECCCEEEEHHCCCCCCCCCH
INKANQKMKEGDKKGTIEALKLAGVSMIENQELIPLQQTRKDVTTALSLMNEGKYYQAGL
HHHHHHHHHCCCCCCCHHHHHHHCHHHCCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEE
ILKSAQDGIIVDSQSVQELPTAPVQHDSAH
EEECCCCCEEECCCHHHHCCCCCCCCCCCC
>Mature Secondary Structure
MKSHIIPGVALMVILFSGNVMAATNMTDNVTLNNDKISGQAWQAMRDIGMSRFELFNGRT
CCCCCCCHHHHHHHHHCCCEEEECCCCCCEEECCCCCCCHHHHHHHHCCHHHHHHHCCCC
QKAEQLAAQAEKLLNDDSTDWNLYVKSDKKAPVEGDRYIRINSSITVAEDYLPAGQKNDA
HHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCCCEEEECCCEEEEHHCCCCCCCCCH
INKANQKMKEGDKKGTIEALKLAGVSMIENQELIPLQQTRKDVTTALSLMNEGKYYQAGL
HHHHHHHHHCCCCCCCHHHHHHHCHHHCCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEE
ILKSAQDGIIVDSQSVQELPTAPVQHDSAH
EEECCCCCEEECCCHHHHCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]