Definition | Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633 chromosome, complete genome. |
---|---|
Accession | NC_011094 |
Length | 4,709,075 |
Click here to switch to the map view.
The map label for this gene is 194738055
Identifier: 194738055
GI number: 194738055
Start: 1804312
End: 1805190
Strand: Direct
Name: 194738055
Synonym: SeSA_A1863
Alternate gene names: NA
Gene position: 1804312-1805190 (Clockwise)
Preceding gene: 194733919
Following gene: 194737269
Centisome position: 38.32
GC content: 53.81
Gene sequence:
>879_bases ATGTTTCGACACGTAAAACAACTTCAATATACTGTGCGAGTGAGCGAACCTAATCCTGGGTTAGCGAACCTGCTGCTGGA ACAGTTTGGCGGCCCGCAGGGCGAACTGGCGGCCGCCTGCCGCTACTTCACGCAAGGTTTAAGCGATGATGATGCCGGTC GTAGAGAGATGTTAATGGACATCGCCACCGAGGAGCTGAGTCATCTGGAAATTATCGGCTCACTGGTAGGAATGCTTAAT AAAGGCGCTAAAGGCGAGCTGGCGGAAGGCACCGAAAACGAAGCGGAACTTTATCGCTCGCTGACGCAGAATGGTAATGA CAGCCATATCACCTCTCTGCTGTATGGCGGCGGCCCTGCGTTGACAAACTCCGGCGGCGTACCGTGGACCGCGGCTTATA TTGATACTATCGGCGAAGTCACAGCCGATCTACGCTCAAACATCGCGGCAGAGGCGCGAGCGAAGATCATTTATGAACGC CTGATTAATCTGACCGACGATCCTGGCGTAAAAGACACGCTCAGTTTCTTAATGACCCGTGAAGTCGCGCATCAGCTCTC TTTTGAAAAGGCGCTGTATTCGATTCGTAACAACTTCCCGCCGGGTAAATTACCGCCGGTAGAACAGTATACCGACGTGT ACTACAACATGTCGCAAGGCGACGATCCGCGAGGTAGCTGGAATAGCGATGAGAACTTCAACTATGTCGCAGAACCGATG CCTGCTGTTGATGGCGGCGATGGCCTGGCGACAGTGAAATTGCCGCGCGAGCAGCTGGCGCTGCTCAAAGCGATGGCAGA AAGAACGAAATCGGACCCCACCGTTGATCCTCTCACTGGCGCAGAACTAGGCTGCGGCGAACCGAAAGAAGACAAGTGA
Upstream 100 bases:
>100_bases TGGCTTATCAAACATATTCCGCAGACAACGGAACAATTTTTACTGCGATCTGAAGCAGATGGCGTTGAAGCCAAAAAATA AATAATAAGCAGGAGGCAAT
Downstream 100 bases:
>100_bases GTTCCGACAAGTAAAATCCGTGTGTCATGTCCTTTTTTGACCCCGCCTGGCGGGGTCTTTTTTCGTCACAACATCACGCG ATTAGAAACGATAGCCTGCC
Product: catalase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 292; Mature: 292
Protein sequence:
>292_residues MFRHVKQLQYTVRVSEPNPGLANLLLEQFGGPQGELAAACRYFTQGLSDDDAGRREMLMDIATEELSHLEIIGSLVGMLN KGAKGELAEGTENEAELYRSLTQNGNDSHITSLLYGGGPALTNSGGVPWTAAYIDTIGEVTADLRSNIAAEARAKIIYER LINLTDDPGVKDTLSFLMTREVAHQLSFEKALYSIRNNFPPGKLPPVEQYTDVYYNMSQGDDPRGSWNSDENFNYVAEPM PAVDGGDGLATVKLPREQLALLKAMAERTKSDPTVDPLTGAELGCGEPKEDK
Sequences:
>Translated_292_residues MFRHVKQLQYTVRVSEPNPGLANLLLEQFGGPQGELAAACRYFTQGLSDDDAGRREMLMDIATEELSHLEIIGSLVGMLN KGAKGELAEGTENEAELYRSLTQNGNDSHITSLLYGGGPALTNSGGVPWTAAYIDTIGEVTADLRSNIAAEARAKIIYER LINLTDDPGVKDTLSFLMTREVAHQLSFEKALYSIRNNFPPGKLPPVEQYTDVYYNMSQGDDPRGSWNSDENFNYVAEPM PAVDGGDGLATVKLPREQLALLKAMAERTKSDPTVDPLTGAELGCGEPKEDK >Mature_292_residues MFRHVKQLQYTVRVSEPNPGLANLLLEQFGGPQGELAAACRYFTQGLSDDDAGRREMLMDIATEELSHLEIIGSLVGMLN KGAKGELAEGTENEAELYRSLTQNGNDSHITSLLYGGGPALTNSGGVPWTAAYIDTIGEVTADLRSNIAAEARAKIIYER LINLTDDPGVKDTLSFLMTREVAHQLSFEKALYSIRNNFPPGKLPPVEQYTDVYYNMSQGDDPRGSWNSDENFNYVAEPM PAVDGGDGLATVKLPREQLALLKAMAERTKSDPTVDPLTGAELGCGEPKEDK
Specific function: Unknown
COG id: COG3546
COG function: function code P; Mn-containing catalase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the manganese catalase family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR007760 - InterPro: IPR012347 - InterPro: IPR009078 [H]
Pfam domain/function: PF05067 Mn_catalase [H]
EC number: =1.11.1.6 [H]
Molecular weight: Translated: 31829; Mature: 31829
Theoretical pI: Translated: 4.35; Mature: 4.35
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFRHVKQLQYTVRVSEPNPGLANLLLEQFGGPQGELAAACRYFTQGLSDDDAGRREMLMD CCHHHHHHEEEEEECCCCCCHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCCHHHHHHHH IATEELSHLEIIGSLVGMLNKGAKGELAEGTENEAELYRSLTQNGNDSHITSLLYGGGPA HHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHCCCCCHHHHHHHCCCCCC LTNSGGVPWTAAYIDTIGEVTADLRSNIAAEARAKIIYERLINLTDDPGVKDTLSFLMTR CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHH EVAHQLSFEKALYSIRNNFPPGKLPPVEQYTDVYYNMSQGDDPRGSWNSDENFNYVAEPM HHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHEECCCCCCCCCCCCCCCCCCCCCCCC PAVDGGDGLATVKLPREQLALLKAMAERTKSDPTVDPLTGAELGCGEPKEDK CCCCCCCCEEEEECCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure MFRHVKQLQYTVRVSEPNPGLANLLLEQFGGPQGELAAACRYFTQGLSDDDAGRREMLMD CCHHHHHHEEEEEECCCCCCHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCCHHHHHHHH IATEELSHLEIIGSLVGMLNKGAKGELAEGTENEAELYRSLTQNGNDSHITSLLYGGGPA HHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHCCCCCHHHHHHHCCCCCC LTNSGGVPWTAAYIDTIGEVTADLRSNIAAEARAKIIYERLINLTDDPGVKDTLSFLMTR CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHH EVAHQLSFEKALYSIRNNFPPGKLPPVEQYTDVYYNMSQGDDPRGSWNSDENFNYVAEPM HHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHEECCCCCCCCCCCCCCCCCCCCCCCC PAVDGGDGLATVKLPREQLALLKAMAERTKSDPTVDPLTGAELGCGEPKEDK CCCCCCCCEEEEECCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11466286 [H]