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The map label for this gene is invF [H]

Identifier: 194737921

GI number: 194737921

Start: 2950478

End: 2951227

Strand: Reverse

Name: invF [H]

Synonym: SeSA_A3052

Alternate gene names: 194737921

Gene position: 2951227-2950478 (Counterclockwise)

Preceding gene: 194737363

Following gene: 194736395

Centisome position: 62.67

GC content: 46.27

Gene sequence:

>750_bases
ATGCTAAATACGCAGGAAGTACTTAAAGAAGGAGAGAAGCGGAAAATCCGCAGCCCGGAAGCATGGTTTATACAGACGTG
TTCCGCGCAAAAGCTGCATATGTCATTTTCTGAAAGCCGACGCAATGAAAACTGCCTGATTCAGGAAGGCGCGCTGCTTT
TTTGCGAGCAGGCCGTTGTCGCACCAGTATCAGGAGACCTGGTTTTTCGACCGTTAAAAATTGAAGTACTCAGCAAATTA
CTGGCATTTATCGATGGCGCAGGATTAGTGGACACGACATATGCTGAATCCGATAAATGGGTTTTGCTGAGTCCTGAGTT
TCGCGCTATTTGGCAAGATCGTAAACGCTGCGAGTACTGGTTTTTGCAGCAAATTATTACGCCTTCTCCGGCCTTCAATA
AGGTACTGGCGCTGTTACGAAAAAGCGAGAGTTACTGGTTGGTTGGCTATTTACTCGCTCAGTCAACCAGCGGCAACACG
ATGAGAATGCTGGGAGAAGACTATGGCGTTTCTTATACCCATTTTCGTCGTTTGTGCAGCAGAGCGTTGGGCGGAAAAGC
GAAGAGTGAATTACGAAACTGGCGTATGGCGCAATCGCTGCTGAATAGTGTAGAAGGCCACGAGAACATCACCCAATTAG
CCGTTAATCATGGTTACTCATCGCCTTCACATTTTTCTAGTGAGATCAAAGAGCTGATCGGCGTTTCGCCTCGGAAATTA
TCAAATATTATTCAATTGGCAGACAAATGA

Upstream 100 bases:

>100_bases
AGCGGGTGGCATCAGTTTCATAATGATTGCATCAGGATTTTGCCACTCGCTCCCGGTATTGTTTACATATTAAAATGATT
TTTAACTGGTGCTGACAACT

Downstream 100 bases:

>100_bases
AGACACATATTCTTTTGGCCAGAGTGCTGGCATGTGCCGCGCTTGTTCTGGTTGCACCTGGTTATTCTAGTGAAAAAATA
CCTGTAACGGGAAGTGGGTT

Product: invasion protein

Products: NA

Alternate protein names: Transcriptional regulator invF [H]

Number of amino acids: Translated: 249; Mature: 249

Protein sequence:

>249_residues
MLNTQEVLKEGEKRKIRSPEAWFIQTCSAQKLHMSFSESRRNENCLIQEGALLFCEQAVVAPVSGDLVFRPLKIEVLSKL
LAFIDGAGLVDTTYAESDKWVLLSPEFRAIWQDRKRCEYWFLQQIITPSPAFNKVLALLRKSESYWLVGYLLAQSTSGNT
MRMLGEDYGVSYTHFRRLCSRALGGKAKSELRNWRMAQSLLNSVEGHENITQLAVNHGYSSPSHFSSEIKELIGVSPRKL
SNIIQLADK

Sequences:

>Translated_249_residues
MLNTQEVLKEGEKRKIRSPEAWFIQTCSAQKLHMSFSESRRNENCLIQEGALLFCEQAVVAPVSGDLVFRPLKIEVLSKL
LAFIDGAGLVDTTYAESDKWVLLSPEFRAIWQDRKRCEYWFLQQIITPSPAFNKVLALLRKSESYWLVGYLLAQSTSGNT
MRMLGEDYGVSYTHFRRLCSRALGGKAKSELRNWRMAQSLLNSVEGHENITQLAVNHGYSSPSHFSSEIKELIGVSPRKL
SNIIQLADK
>Mature_249_residues
MLNTQEVLKEGEKRKIRSPEAWFIQTCSAQKLHMSFSESRRNENCLIQEGALLFCEQAVVAPVSGDLVFRPLKIEVLSKL
LAFIDGAGLVDTTYAESDKWVLLSPEFRAIWQDRKRCEYWFLQQIITPSPAFNKVLALLRKSESYWLVGYLLAQSTSGNT
MRMLGEDYGVSYTHFRRLCSRALGGKAKSELRNWRMAQSLLNSVEGHENITQLAVNHGYSSPSHFSSEIKELIGVSPRKL
SNIIQLADK

Specific function: Transcriptional regulator required for the expression of several genes encoding type III secretion system SPI1 effector proteins. The interaction with sicA is necessary for the activation of sigDE (sopB pipC), sicAsipBCDA, and sopE [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH araC/xylS-type DNA-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009057
- InterPro:   IPR012287
- InterPro:   IPR018062
- InterPro:   IPR018060 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 28291; Mature: 28291

Theoretical pI: Translated: 8.94; Mature: 8.94

Prosite motif: PS00041 HTH_ARAC_FAMILY_1 ; PS01124 HTH_ARAC_FAMILY_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLNTQEVLKEGEKRKIRSPEAWFIQTCSAQKLHMSFSESRRNENCLIQEGALLFCEQAVV
CCCHHHHHHCCHHHCCCCCCHHEEECCCCHHHHHHHHHHCCCCCCEEECCHHHHHHHHHH
APVSGDLVFRPLKIEVLSKLLAFIDGAGLVDTTYAESDKWVLLSPEFRAIWQDRKRCEYW
CCCCCCEEECHHHHHHHHHHHHHHCCCCCEECCCCCCCCEEEECCHHHHHHHHHHHHHHH
FLQQIITPSPAFNKVLALLRKSESYWLVGYLLAQSTSGNTMRMLGEDYGVSYTHFRRLCS
HHHHHHCCCHHHHHHHHHHHCCCCEEEEEHHHHHCCCCCCCEECCCCCCCCHHHHHHHHH
RALGGKAKSELRNWRMAQSLLNSVEGHENITQLAVNHGYSSPSHFSSEIKELIGVSPRKL
HHHCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCHHHHHHHHHHHHCCCHHHH
SNIIQLADK
HHHHHHHCC
>Mature Secondary Structure
MLNTQEVLKEGEKRKIRSPEAWFIQTCSAQKLHMSFSESRRNENCLIQEGALLFCEQAVV
CCCHHHHHHCCHHHCCCCCCHHEEECCCCHHHHHHHHHHCCCCCCEEECCHHHHHHHHHH
APVSGDLVFRPLKIEVLSKLLAFIDGAGLVDTTYAESDKWVLLSPEFRAIWQDRKRCEYW
CCCCCCEEECHHHHHHHHHHHHHHCCCCCEECCCCCCCCEEEECCHHHHHHHHHHHHHHH
FLQQIITPSPAFNKVLALLRKSESYWLVGYLLAQSTSGNTMRMLGEDYGVSYTHFRRLCS
HHHHHHCCCHHHHHHHHHHHCCCCEEEEEHHHHHCCCCCCCEECCCCCCCCHHHHHHHHH
RALGGKAKSELRNWRMAQSLLNSVEGHENITQLAVNHGYSSPSHFSSEIKELIGVSPRKL
HHHCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCHHHHHHHHHHHHCCCHHHH
SNIIQLADK
HHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11677608; 12644504 [H]