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The map label for this gene is yobA [H]

Identifier: 194737914

GI number: 194737914

Start: 1948103

End: 1948477

Strand: Reverse

Name: yobA [H]

Synonym: SeSA_A2029

Alternate gene names: 194737914

Gene position: 1948477-1948103 (Counterclockwise)

Preceding gene: 194735292

Following gene: 194737498

Centisome position: 41.38

GC content: 53.6

Gene sequence:

>375_bases
ATGGCTTCTTCTGCACCATCGCGACGTTTAGCTTTACTGCTGCTGGCATCGACATTTGCGACGCCAGCGGCCTGGGCACA
TGCGCACCTGACGCATCAGTATCCAGCGGCGAATGCTGCCGTTACGGCCTCGCCACAGGCGCTGACTCTGAATTTTTCTG
AAGGGATTGAGCCAGGGTTCAGCGGCGCAACCATTACTGGCCCTCAGCAAGAGCTCATCAAAACGCGCCCGGCAAAGCGA
AATGAGCAGGATAAAACGCAGTTGATTATCCCGCTTGAGCAGCCGTTAAAATCTGGCGCTTACACGGTAGACTGGCACGT
TGTGTCGGTGGATGGACATAAAACAAAAGGGAAATACACCTTCAGCGTGAAATAA

Upstream 100 bases:

>100_bases
GAGTCCGCGGTAATGGCAAGATGGAAATGATGATCCTCGACTCATTGATTGTTGAAGGTTATTCTTTGTAACGTAGGTAT
AACAAAAAGGAATAGTGAAT

Downstream 100 bases:

>100_bases
ATGATGCTGACATTCGTCTGGATAACTCTCCGATTTATTCATTTTGCTAGTTTGATGCTGGTCTACGGCTGCGCGCTTTA
CGGCGCCTGGCTGGCACCTG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 124; Mature: 123

Protein sequence:

>124_residues
MASSAPSRRLALLLLASTFATPAAWAHAHLTHQYPAANAAVTASPQALTLNFSEGIEPGFSGATITGPQQELIKTRPAKR
NEQDKTQLIIPLEQPLKSGAYTVDWHVVSVDGHKTKGKYTFSVK

Sequences:

>Translated_124_residues
MASSAPSRRLALLLLASTFATPAAWAHAHLTHQYPAANAAVTASPQALTLNFSEGIEPGFSGATITGPQQELIKTRPAKR
NEQDKTQLIIPLEQPLKSGAYTVDWHVVSVDGHKTKGKYTFSVK
>Mature_123_residues
ASSAPSRRLALLLLASTFATPAAWAHAHLTHQYPAANAAVTASPQALTLNFSEGIEPGFSGATITGPQQELIKTRPAKRN
EQDKTQLIIPLEQPLKSGAYTVDWHVVSVDGHKTKGKYTFSVK

Specific function: Unknown

COG id: COG2372

COG function: function code R; Uncharacterized protein, homolog of Cu resistance protein CopC

Gene ontology:

Cell location: Periplasm [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the CopC family [H]

Homologues:

Organism=Escherichia coli, GI1788146, Length=124, Percent_Identity=74.1935483870968, Blast_Score=193, Evalue=2e-51,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007348
- InterPro:   IPR014755
- InterPro:   IPR014756 [H]

Pfam domain/function: PF04234 CopC [H]

EC number: NA

Molecular weight: Translated: 13321; Mature: 13190

Theoretical pI: Translated: 10.14; Mature: 10.14

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
0.8 %Met     (Translated Protein)
0.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
0.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MASSAPSRRLALLLLASTFATPAAWAHAHLTHQYPAANAAVTASPQALTLNFSEGIEPGF
CCCCCCCHHHHEEEEHHHHCCCCHHHHEEEECCCCCCCEEEECCCCEEEEECCCCCCCCC
SGATITGPQQELIKTRPAKRNEQDKTQLIIPLEQPLKSGAYTVDWHVVSVDGHKTKGKYT
CCCEECCCHHHHHHCCCCCCCCCCCEEEEEECCHHHCCCCEEEEEEEEEECCCCCCCEEE
FSVK
EEEC
>Mature Secondary Structure 
ASSAPSRRLALLLLASTFATPAAWAHAHLTHQYPAANAAVTASPQALTLNFSEGIEPGF
CCCCCCHHHHEEEEHHHHCCCCHHHHEEEECCCCCCCEEEECCCCEEEEECCCCCCCCC
SGATITGPQQELIKTRPAKRNEQDKTQLIIPLEQPLKSGAYTVDWHVVSVDGHKTKGKYT
CCCEECCCHHHHHHCCCCCCCCCCCEEEEEECCHHHCCCCEEEEEEEEEECCCCCCCEEE
FSVK
EEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: Cu [C]

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12471157 [H]