Definition | Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633 chromosome, complete genome. |
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Accession | NC_011094 |
Length | 4,709,075 |
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The map label for this gene is 194737488
Identifier: 194737488
GI number: 194737488
Start: 1697616
End: 1699166
Strand: Direct
Name: 194737488
Synonym: SeSA_A1756
Alternate gene names: NA
Gene position: 1697616-1699166 (Clockwise)
Preceding gene: 194735220
Following gene: 194735144
Centisome position: 36.05
GC content: 44.62
Gene sequence:
>1551_bases ATGGCGCTACCACAACTATCAATATGGCAGCCCGGCGATGGGTTAAGAAAAATAAAGTATAAATATCATGTTTGTCTCAT TGTCATATTCTCCGTCCTTATACGGTTGCTGTTTTTAACTGACCGCTACCTTTGGTGTGACGAAGCGTCCAGCGTGCTGA TTAGTCGACATAGCGTAGATAATCTGCTATTCCATGCCGCTTTTGACGTGCATCCCCCGCTTTATTATCTGTTACTGCAT GACTGGATCATATTATGGGGTGATAGCATTGCAGCGGTACGCTCTCTCAGTCTACTCTTTGGGATCCTGACAGTTGTGCT GGTTATCGCGCTTACGCGATGGCTGGCAAATGAGCGTACAGCCTTATTGGCTGGATGGTTTGCCGCCCTGATGCCGATGG CAGTTCATTACAGTCAAGAAACGCGCATGTACGCGTTAATGGGAATGCTAACGCTCGCTGCCGCGTTAGCATTGATGATG TGGATAAAAACACCCACCCATAATCGCTATCTTGTCGCGTATGCTTTGCTTATGACGTTCAGTTTTTACACCCATTATTT CACCCTATTTGCACTTATTGCCCACTGGATCGCAGTAACAATATTATCCTGCCAAAGCCATAAAACGGCCTGCTACCTTA AACTTCCTGGCTGGTGGTTTGCTAACCTGGCGATTGCTGTCGCTTATCTCCCCTGGTTGCCCGTATTGTTTAATTTACTG ACTCATCTGGCGCAGTTGAGAGCCGGTAATGATATCGGTTGGATTCCCCCCGTAACATGGCGTGATCTGCCTGCAATGTA CTGGCATTTCTTTACCGGAAACAACGGACAGGGTTTTCCGTCGATCATTCTGTGGCTGGCTGTGGGAAGTTTTATCGGTA CTGTGGGGCGAATATCTTTATGCAACGGAGAATATGAAAGATATCAGCTGATATTATTTTGTAATCTGGTCATCCCTGTA ATGCTGGTCTTCATCATCTCCTGGTGGATGCCGTTATTTATCGATCGTTATTTCTTCTTCTCATCGCTGAGCATTCCTCC CCTGCTCGCGGTATTACTTACCCGCGCAAAAAAAGCGGTTTGTGGCTTCGGTTTTATCTTATTCACCTTATTATTCGGCT ATGGTTCATATCATAATAATCCTGAGCACATAGACGAGTTTAAACCATTGGTAAACTATATTAATACCCGTCACCAGCCT AATGATGCCGTGGTAGTCAGTAAAATGTTCGATTATTTAAGTTATGTGTATTATAATAAGCGAGATTATCGTGCGTTTCT TTATACACCACCTAACGCACACGGAACATCAGGCAGACCGAATGCCTATGGCTTTGGTTCACTGTTTTATGCGCAAGCCG ACCAGACATATATTGATACTCTGACAACGCTTTCAAAAAGTCACCATCGTGTCTGGTTGATAAGCGGCGGTAACTTTAGT CAGGATTACCCCTTGCCGTCAGAATGGCAAAATATCGCAAACTTCAGAAGTGGTAGATTTCAGGTACAATTATTTGTAAT ACCGACTCAACAGGCGCATCAAATGCAATGA
Upstream 100 bases:
>100_bases ATTATCAAAGTTATTTTTATTTAGTGTTGGTTAAGATTTTAACCTTCATTATTGCGTCAGGTGTCCATTCTGGTCTAAGT CTTACTCCATTGAGGATATT
Downstream 100 bases:
>100_bases TTACCGTTTTTTATCCAGTGCAGTGATAAACAGTACTGCCACTGCCAGACCGCCTAAAAGTAGGGTCCAGCCAAACGCTT CAAAAACCTCAATCATATCG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 516; Mature: 515
Protein sequence:
>516_residues MALPQLSIWQPGDGLRKIKYKYHVCLIVIFSVLIRLLFLTDRYLWCDEASSVLISRHSVDNLLFHAAFDVHPPLYYLLLH DWIILWGDSIAAVRSLSLLFGILTVVLVIALTRWLANERTALLAGWFAALMPMAVHYSQETRMYALMGMLTLAAALALMM WIKTPTHNRYLVAYALLMTFSFYTHYFTLFALIAHWIAVTILSCQSHKTACYLKLPGWWFANLAIAVAYLPWLPVLFNLL THLAQLRAGNDIGWIPPVTWRDLPAMYWHFFTGNNGQGFPSIILWLAVGSFIGTVGRISLCNGEYERYQLILFCNLVIPV MLVFIISWWMPLFIDRYFFFSSLSIPPLLAVLLTRAKKAVCGFGFILFTLLFGYGSYHNNPEHIDEFKPLVNYINTRHQP NDAVVVSKMFDYLSYVYYNKRDYRAFLYTPPNAHGTSGRPNAYGFGSLFYAQADQTYIDTLTTLSKSHHRVWLISGGNFS QDYPLPSEWQNIANFRSGRFQVQLFVIPTQQAHQMQ
Sequences:
>Translated_516_residues MALPQLSIWQPGDGLRKIKYKYHVCLIVIFSVLIRLLFLTDRYLWCDEASSVLISRHSVDNLLFHAAFDVHPPLYYLLLH DWIILWGDSIAAVRSLSLLFGILTVVLVIALTRWLANERTALLAGWFAALMPMAVHYSQETRMYALMGMLTLAAALALMM WIKTPTHNRYLVAYALLMTFSFYTHYFTLFALIAHWIAVTILSCQSHKTACYLKLPGWWFANLAIAVAYLPWLPVLFNLL THLAQLRAGNDIGWIPPVTWRDLPAMYWHFFTGNNGQGFPSIILWLAVGSFIGTVGRISLCNGEYERYQLILFCNLVIPV MLVFIISWWMPLFIDRYFFFSSLSIPPLLAVLLTRAKKAVCGFGFILFTLLFGYGSYHNNPEHIDEFKPLVNYINTRHQP NDAVVVSKMFDYLSYVYYNKRDYRAFLYTPPNAHGTSGRPNAYGFGSLFYAQADQTYIDTLTTLSKSHHRVWLISGGNFS QDYPLPSEWQNIANFRSGRFQVQLFVIPTQQAHQMQ >Mature_515_residues ALPQLSIWQPGDGLRKIKYKYHVCLIVIFSVLIRLLFLTDRYLWCDEASSVLISRHSVDNLLFHAAFDVHPPLYYLLLHD WIILWGDSIAAVRSLSLLFGILTVVLVIALTRWLANERTALLAGWFAALMPMAVHYSQETRMYALMGMLTLAAALALMMW IKTPTHNRYLVAYALLMTFSFYTHYFTLFALIAHWIAVTILSCQSHKTACYLKLPGWWFANLAIAVAYLPWLPVLFNLLT HLAQLRAGNDIGWIPPVTWRDLPAMYWHFFTGNNGQGFPSIILWLAVGSFIGTVGRISLCNGEYERYQLILFCNLVIPVM LVFIISWWMPLFIDRYFFFSSLSIPPLLAVLLTRAKKAVCGFGFILFTLLFGYGSYHNNPEHIDEFKPLVNYINTRHQPN DAVVVSKMFDYLSYVYYNKRDYRAFLYTPPNAHGTSGRPNAYGFGSLFYAQADQTYIDTLTTLSKSHHRVWLISGGNFSQ DYPLPSEWQNIANFRSGRFQVQLFVIPTQQAHQMQ
Specific function: Unknown
COG id: COG5305
COG function: function code S; Predicted membrane protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 59392; Mature: 59261
Theoretical pI: Translated: 9.07; Mature: 9.07
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MALPQLSIWQPGDGLRKIKYKYHVCLIVIFSVLIRLLFLTDRYLWCDEASSVLISRHSVD CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCHHHHHHHHHHHH NLLFHAAFDVHPPLYYLLLHDWIILWGDSIAAVRSLSLLFGILTVVLVIALTRWLANERT HHHHHHHHCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCH ALLAGWFAALMPMAVHYSQETRMYALMGMLTLAAALALMMWIKTPTHNRYLVAYALLMTF HHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHH SFYTHYFTLFALIAHWIAVTILSCQSHKTACYLKLPGWWFANLAIAVAYLPWLPVLFNLL HHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHH THLAQLRAGNDIGWIPPVTWRDLPAMYWHFFTGNNGQGFPSIILWLAVGSFIGTVGRISL HHHHHHHCCCCCCCCCCCCCCCCCHHEEEEEECCCCCCHHHHHHHHHHHHHHHHHCEEEE CNGEYERYQLILFCNLVIPVMLVFIISWWMPLFIDRYFFFSSLSIPPLLAVLLTRAKKAV CCCCHHHEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH CGFGFILFTLLFGYGSYHNNPEHIDEFKPLVNYINTRHQPNDAVVVSKMFDYLSYVYYNK HHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCC RDYRAFLYTPPNAHGTSGRPNAYGFGSLFYAQADQTYIDTLTTLSKSHHRVWLISGGNFS CCCEEEEECCCCCCCCCCCCCCCCCCCEEEECCCCHHHHHHHHHCCCCCEEEEEECCCCC QDYPLPSEWQNIANFRSGRFQVQLFVIPTQQAHQMQ CCCCCCHHHHHHHHCCCCCEEEEEEEEECCHHCCCC >Mature Secondary Structure ALPQLSIWQPGDGLRKIKYKYHVCLIVIFSVLIRLLFLTDRYLWCDEASSVLISRHSVD CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCHHHHHHHHHHHH NLLFHAAFDVHPPLYYLLLHDWIILWGDSIAAVRSLSLLFGILTVVLVIALTRWLANERT HHHHHHHHCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCH ALLAGWFAALMPMAVHYSQETRMYALMGMLTLAAALALMMWIKTPTHNRYLVAYALLMTF HHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHH SFYTHYFTLFALIAHWIAVTILSCQSHKTACYLKLPGWWFANLAIAVAYLPWLPVLFNLL HHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHH THLAQLRAGNDIGWIPPVTWRDLPAMYWHFFTGNNGQGFPSIILWLAVGSFIGTVGRISL HHHHHHHCCCCCCCCCCCCCCCCCHHEEEEEECCCCCCHHHHHHHHHHHHHHHHHCEEEE CNGEYERYQLILFCNLVIPVMLVFIISWWMPLFIDRYFFFSSLSIPPLLAVLLTRAKKAV CCCCHHHEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH CGFGFILFTLLFGYGSYHNNPEHIDEFKPLVNYINTRHQPNDAVVVSKMFDYLSYVYYNK HHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCC RDYRAFLYTPPNAHGTSGRPNAYGFGSLFYAQADQTYIDTLTTLSKSHHRVWLISGGNFS CCCEEEEECCCCCCCCCCCCCCCCCCCEEEECCCCHHHHHHHHHCCCCCEEEEEECCCCC QDYPLPSEWQNIANFRSGRFQVQLFVIPTQQAHQMQ CCCCCCHHHHHHHHCCCCCEEEEEEEEECCHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA