Click here to switch to the map view.

The map label for this gene is yicL [H]

Identifier: 194737119

GI number: 194737119

Start: 3846146

End: 3847093

Strand: Direct

Name: yicL [H]

Synonym: SeSA_A3972

Alternate gene names: 194737119

Gene position: 3846146-3847093 (Clockwise)

Preceding gene: 194734880

Following gene: 194735474

Centisome position: 81.68

GC content: 52.64

Gene sequence:

>948_bases
ATGATGCCTGCACGTAAAAAAATAAAACAACATGACGAGGAAAAAATGGGTTCCACCAGAAAAGGGATGCTAAACGTCCT
GATTGCCGCCGTATTGTGGGGGAGTTCAGGCGTTTGCGCGCAGTACATCATGGAGCAAAGCCGTATGTCGTCACAGTTCC
TGACGATGATACGTTTGTTATTCGCCGGGCTGATACTGGTGACCTTCTCCTTTATGCACGGCGATAAGATATTTTCGATT
CTTAAAAACCGCAAAGATGCACTGAGTCTGCTGATTTTCTCCGTGGTGGGCGCGCTCACCGTTCAGCTAACCTTCCTGCT
TACGATTGAAAAATCCAATGCCGCCACCGCGACAGTGCTGCAATTTTTATCGCCGACCATTATTGTGGCGTGGTTTGCAT
TAGCGCGAAGAACACGACCAGGCATTCTGGTCTTAACGGCCATTCTTACATCGCTTATCGGCACCTTTTTACTGGTGACT
CACGGCAATCCAACATCGCTGTCGATCTCTTCAGGCGCGCTGTTCTGGGGTATCGCCTCCGCATTTGCCGCCGCCTTTTA
TACGACCTGGCCTTCCAGGCTAATCGCCCAATACGGCACACTGCCAGTGGTCGGCTGGAGTATGTCCTTTGGCGGCCTTA
TTCTGCTGCCCTTCTACGCTAAAGAAGGAACGCACTTTGCGGTGAGCGGCAGTCTGATTCTGGCCTTTTTCTACCTTGTG
GTGATCGGTACGTCGCTGACGTTCAGCCTGTATTTGAAAGGCGCGCAACTGATTGGTGGCCCCAAGGCCAGCATTTTAAG
CTGCGCGGAACCGTTAAGCAGCGCCCTGCTGTCGCTGCTGCTGTTGGGGATTAGTTTTACCTTGCCGGACTGGCTGGGCA
CGCTGCTCATTCTCTCGTCAGTGATTCTGATCTCCCTCGATTCCCGTCGACGCGCGCGGGCCGCTTAA

Upstream 100 bases:

>100_bases
TATTTTCTATGACAAAAAAATGACAATATTATGTCAATAACAGGCTCGTCTGAAATCATTAAACAATAAATTCCTGCTTA
ATGCCGGCGATAGCTCTGTT

Downstream 100 bases:

>100_bases
CGCCGTTGATAATCACGATGACCGGGCGGAAGAGGGAAAAGTTTAATGGCGCTTTGCCTTAATCTCTTCGTCAGAAAGCC
CGGTAATCATCAGCACCATC

Product: carboxylate/amino acid/amine transporter

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 315; Mature: 315

Protein sequence:

>315_residues
MMPARKKIKQHDEEKMGSTRKGMLNVLIAAVLWGSSGVCAQYIMEQSRMSSQFLTMIRLLFAGLILVTFSFMHGDKIFSI
LKNRKDALSLLIFSVVGALTVQLTFLLTIEKSNAATATVLQFLSPTIIVAWFALARRTRPGILVLTAILTSLIGTFLLVT
HGNPTSLSISSGALFWGIASAFAAAFYTTWPSRLIAQYGTLPVVGWSMSFGGLILLPFYAKEGTHFAVSGSLILAFFYLV
VIGTSLTFSLYLKGAQLIGGPKASILSCAEPLSSALLSLLLLGISFTLPDWLGTLLILSSVILISLDSRRRARAA

Sequences:

>Translated_315_residues
MMPARKKIKQHDEEKMGSTRKGMLNVLIAAVLWGSSGVCAQYIMEQSRMSSQFLTMIRLLFAGLILVTFSFMHGDKIFSI
LKNRKDALSLLIFSVVGALTVQLTFLLTIEKSNAATATVLQFLSPTIIVAWFALARRTRPGILVLTAILTSLIGTFLLVT
HGNPTSLSISSGALFWGIASAFAAAFYTTWPSRLIAQYGTLPVVGWSMSFGGLILLPFYAKEGTHFAVSGSLILAFFYLV
VIGTSLTFSLYLKGAQLIGGPKASILSCAEPLSSALLSLLLLGISFTLPDWLGTLLILSSVILISLDSRRRARAA
>Mature_315_residues
MMPARKKIKQHDEEKMGSTRKGMLNVLIAAVLWGSSGVCAQYIMEQSRMSSQFLTMIRLLFAGLILVTFSFMHGDKIFSI
LKNRKDALSLLIFSVVGALTVQLTFLLTIEKSNAATATVLQFLSPTIIVAWFALARRTRPGILVLTAILTSLIGTFLLVT
HGNPTSLSISSGALFWGIASAFAAAFYTTWPSRLIAQYGTLPVVGWSMSFGGLILLPFYAKEGTHFAVSGSLILAFFYLV
VIGTSLTFSLYLKGAQLIGGPKASILSCAEPLSSALLSLLLLGISFTLPDWLGTLLILSSVILISLDSRRRARAA

Specific function: Unknown

COG id: COG0697

COG function: function code GER; Permeases of the drug/metabolite transporter (DMT) superfamily

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 2 DUF6 domains [H]

Homologues:

Organism=Escherichia coli, GI1790092, Length=298, Percent_Identity=89.5973154362416, Blast_Score=507, Evalue=1e-145,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004779
- InterPro:   IPR000620 [H]

Pfam domain/function: PF00892 DUF6 [H]

EC number: NA

Molecular weight: Translated: 34049; Mature: 34049

Theoretical pI: Translated: 10.77; Mature: 10.77

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMPARKKIKQHDEEKMGSTRKGMLNVLIAAVLWGSSGVCAQYIMEQSRMSSQFLTMIRLL
CCCHHHHHHHCCHHHHCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHH
FAGLILVTFSFMHGDKIFSILKNRKDALSLLIFSVVGALTVQLTFLLTIEKSNAATATVL
HHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHEEEEEECCCCHHHHHH
QFLSPTIIVAWFALARRTRPGILVLTAILTSLIGTFLLVTHGNPTSLSISSGALFWGIAS
HHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHEEEECCCCCEEEECCCHHHHHHHH
AFAAAFYTTWPSRLIAQYGTLPVVGWSMSFGGLILLPFYAKEGTHFAVSGSLILAFFYLV
HHHHHHHHHHHHHHHHHHCCCCEEECCCCCCCEEEEEEECCCCCEEEEHHHHHHHHHHHH
VIGTSLTFSLYLKGAQLIGGPKASILSCAEPLSSALLSLLLLGISFTLPDWLGTLLILSS
HHHHHHHHHHHCCCHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHH
VILISLDSRRRARAA
HHHHCCCCCHHCCCC
>Mature Secondary Structure
MMPARKKIKQHDEEKMGSTRKGMLNVLIAAVLWGSSGVCAQYIMEQSRMSSQFLTMIRLL
CCCHHHHHHHCCHHHHCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHH
FAGLILVTFSFMHGDKIFSILKNRKDALSLLIFSVVGALTVQLTFLLTIEKSNAATATVL
HHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHEEEEEECCCCHHHHHH
QFLSPTIIVAWFALARRTRPGILVLTAILTSLIGTFLLVTHGNPTSLSISSGALFWGIAS
HHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHEEEECCCCCEEEECCCHHHHHHHH
AFAAAFYTTWPSRLIAQYGTLPVVGWSMSFGGLILLPFYAKEGTHFAVSGSLILAFFYLV
HHHHHHHHHHHHHHHHHHCCCCEEECCCCCCCEEEEEEECCCCCEEEEHHHHHHHHHHHH
VIGTSLTFSLYLKGAQLIGGPKASILSCAEPLSSALLSLLLLGISFTLPDWLGTLLILSS
HHHHHHHHHHHCCCHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHH
VILISLDSRRRARAA
HHHHCCCCCHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11677609; 9311997 [H]