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The map label for this gene is 194736990

Identifier: 194736990

GI number: 194736990

Start: 1451436

End: 1451864

Strand: Direct

Name: 194736990

Synonym: SeSA_A1499

Alternate gene names: NA

Gene position: 1451436-1451864 (Clockwise)

Preceding gene: 194736330

Following gene: 194735084

Centisome position: 30.82

GC content: 47.79

Gene sequence:

>429_bases
ATGAAAGAAGATCAGAAAAATAAAATACCCGAAGACATTCTGAAACAGCTATTATCCGTTGATCCGGAAACCGTTTATGC
CAGTGGTTACGCCTCATGGCAGGAGGGGGATTATTCGCGCGCCGTAATCGATTTTAGTTGGCTGGTGATGGCCCAGCCAT
GGAGTTGGCGTGCCCATATTGCATTGGCTGGCACCTGGATGATGCTTAAAGAATACACGACGGCCATTAATTTCTATGGA
CATGCCTTGATGCTGGATGCCAGCCATCCAGAACCGGTTTACCAAACGGGCGTCTGTCTCAAAATGATGGGGGAACCCGG
GTTGGCGAGAGAGGCTTTTCAAACCGCAATCAAGATGAGTTATGCGGATGCCTCATGGAGTGAGATTCGCCAGAATGCGC
AAATAATGGTTGATACTCTTATTGCTTAA

Upstream 100 bases:

>100_bases
GACAGTTTTATCCGCCGAGCATCTTATCCAGCGACGTTTTTAAATGACCTTCCTGACGTAAATCATTATCACGTGAAAAT
AACAATCAATAGGTATGATG

Downstream 100 bases:

>100_bases
ATAACAGAACGAAATATGAAAATTCATATTCCGTCAGCGGCAAGTAATATAGTCGATGGTAATAGTCCTCCTTCCGATAT
ACAAGCGAAGGAGGCATCGT

Product: type III secretion low calcium response chaperone LcrH/SycD

Products: NA

Alternate protein names: Type III Secretion Low Calcium Response Chaperone LcrH/SycD; Pathogenicity Island Protein

Number of amino acids: Translated: 142; Mature: 142

Protein sequence:

>142_residues
MKEDQKNKIPEDILKQLLSVDPETVYASGYASWQEGDYSRAVIDFSWLVMAQPWSWRAHIALAGTWMMLKEYTTAINFYG
HALMLDASHPEPVYQTGVCLKMMGEPGLAREAFQTAIKMSYADASWSEIRQNAQIMVDTLIA

Sequences:

>Translated_142_residues
MKEDQKNKIPEDILKQLLSVDPETVYASGYASWQEGDYSRAVIDFSWLVMAQPWSWRAHIALAGTWMMLKEYTTAINFYG
HALMLDASHPEPVYQTGVCLKMMGEPGLAREAFQTAIKMSYADASWSEIRQNAQIMVDTLIA
>Mature_142_residues
MKEDQKNKIPEDILKQLLSVDPETVYASGYASWQEGDYSRAVIDFSWLVMAQPWSWRAHIALAGTWMMLKEYTTAINFYG
HALMLDASHPEPVYQTGVCLKMMGEPGLAREAFQTAIKMSYADASWSEIRQNAQIMVDTLIA

Specific function: Unknown

COG id: COG0457

COG function: function code R; FOG: TPR repeat

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 16113; Mature: 16113

Theoretical pI: Translated: 4.69; Mature: 4.69

Prosite motif: PS50293 TPR_REGION

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
6.3 %Met     (Translated Protein)
7.0 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
6.3 %Met     (Mature Protein)
7.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKEDQKNKIPEDILKQLLSVDPETVYASGYASWQEGDYSRAVIDFSWLVMAQPWSWRAHI
CCCCCCCCCCHHHHHHHHCCCCCEEEECCCCCCCCCCCCEEEEEEEEEEEECCCCCEEEE
ALAGTWMMLKEYTTAINFYGHALMLDASHPEPVYQTGVCLKMMGEPGLAREAFQTAIKMS
EEHHHHHHHHHHHHHHHHCCEEEEEECCCCCCHHHHCCEEEECCCCCCHHHHHHHHHHHH
YADASWSEIRQNAQIMVDTLIA
CCCCCHHHHHCCHHHHHHHHCC
>Mature Secondary Structure
MKEDQKNKIPEDILKQLLSVDPETVYASGYASWQEGDYSRAVIDFSWLVMAQPWSWRAHI
CCCCCCCCCCHHHHHHHHCCCCCEEEECCCCCCCCCCCCEEEEEEEEEEEECCCCCEEEE
ALAGTWMMLKEYTTAINFYGHALMLDASHPEPVYQTGVCLKMMGEPGLAREAFQTAIKMS
EEHHHHHHHHHHHHHHHHCCEEEEEECCCCCCHHHHCCEEEECCCCCCHHHHHHHHHHHH
YADASWSEIRQNAQIMVDTLIA
CCCCCHHHHHCCHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA