Definition | Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633 chromosome, complete genome. |
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Accession | NC_011094 |
Length | 4,709,075 |
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The map label for this gene is 194736937
Identifier: 194736937
GI number: 194736937
Start: 1733525
End: 1734349
Strand: Reverse
Name: 194736937
Synonym: SeSA_A1793
Alternate gene names: NA
Gene position: 1734349-1733525 (Counterclockwise)
Preceding gene: 194735412
Following gene: 194736455
Centisome position: 36.83
GC content: 40.0
Gene sequence:
>825_bases ATGTCGAAACATAATCTTATTATCTATAGCCTGCTTCTGGCGGCTGCGCCGATAAGCGTCTTGGCGGATACGTCGACAAC GTCCGCGGCAACCGTCGGGATGTTTTCTCCTCCTACGGCGCCGAGCGTTGGGCACAGGCCTAGTTCGCCGTTGAGTGATT ATGGGTTGGAATTGAATGGGTATTATGGATATTTTGAATCATATATACCTATACCAGGCATGCTTTTAAAAGCAAGAATG GTTGGGAGAGTCAGTGATCTTGATTCTGAAAAATATCAAGCTAATGAAACGGCTACCACAGTATGTACGTATTATCGCGT TGAGAAAGATGACTCACAGCATGAGCTTCTACGTGAAAAGCCGTGTAAATATGAAATTGTTATCAGCGAGGATAATGTAG GTTCGAAGATAAGAATTGAGCATTATAACGAAACAGATATGGTCTCAGCACCAGGATATACGCCTGTGCCGATGGTTTCT GAACTCCATTCTATTGAAACAAAACGTATAGTTAAATTGAGTAAAGATTTATCTGTCATTAGTGCAGATAAATCTTTACT GATGCCAGGAGAGAGTGCTGTTGTGAAAATTATTGTTAAAGATATAAATAATAACCCCATATCTAATCTCAATCTCCAGT GTGGGCATTTTTCAACAGGAAGTTGGAATAGTCGATGCGATATCAAAGCCGGGGGTAATCCCGGAGAGTATCTTCAGACG GTAACTTATAATGGAGGTTCAAATGGAGAGTTGAAATTGACATATAAATATTTTGGGGAATTGATTAAAGATAAATTTAC TATCTCCGGGACAATAAAAAAGTAG
Upstream 100 bases:
>100_bases AATATATCCGGGTCAGAATTATTTCTGATAAGGAAAATGCCAAGAGTTCTACCGCAGCATCTGATGCGAATTAATGTTTT AAAAAGGATCAACAGTGCGT
Downstream 100 bases:
>100_bases AGTAAAAACAGCAATGAATAATGGGTTGGCTTTTATTTCACTGCTCTTATTATGGATGTTGACTTGGTTCTTTAGTAGAT TGCTAAATAATTATTATGGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 274; Mature: 273
Protein sequence:
>274_residues MSKHNLIIYSLLLAAAPISVLADTSTTSAATVGMFSPPTAPSVGHRPSSPLSDYGLELNGYYGYFESYIPIPGMLLKARM VGRVSDLDSEKYQANETATTVCTYYRVEKDDSQHELLREKPCKYEIVISEDNVGSKIRIEHYNETDMVSAPGYTPVPMVS ELHSIETKRIVKLSKDLSVISADKSLLMPGESAVVKIIVKDINNNPISNLNLQCGHFSTGSWNSRCDIKAGGNPGEYLQT VTYNGGSNGELKLTYKYFGELIKDKFTISGTIKK
Sequences:
>Translated_274_residues MSKHNLIIYSLLLAAAPISVLADTSTTSAATVGMFSPPTAPSVGHRPSSPLSDYGLELNGYYGYFESYIPIPGMLLKARM VGRVSDLDSEKYQANETATTVCTYYRVEKDDSQHELLREKPCKYEIVISEDNVGSKIRIEHYNETDMVSAPGYTPVPMVS ELHSIETKRIVKLSKDLSVISADKSLLMPGESAVVKIIVKDINNNPISNLNLQCGHFSTGSWNSRCDIKAGGNPGEYLQT VTYNGGSNGELKLTYKYFGELIKDKFTISGTIKK >Mature_273_residues SKHNLIIYSLLLAAAPISVLADTSTTSAATVGMFSPPTAPSVGHRPSSPLSDYGLELNGYYGYFESYIPIPGMLLKARMV GRVSDLDSEKYQANETATTVCTYYRVEKDDSQHELLREKPCKYEIVISEDNVGSKIRIEHYNETDMVSAPGYTPVPMVSE LHSIETKRIVKLSKDLSVISADKSLLMPGESAVVKIIVKDINNNPISNLNLQCGHFSTGSWNSRCDIKAGGNPGEYLQTV TYNGGSNGELKLTYKYFGELIKDKFTISGTIKK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 30108; Mature: 29976
Theoretical pI: Translated: 6.79; Mature: 6.79
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSKHNLIIYSLLLAAAPISVLADTSTTSAATVGMFSPPTAPSVGHRPSSPLSDYGLELNG CCCCCCHHHHHHHHHCCCEEEECCCCCCEEEEECCCCCCCCCCCCCCCCCHHHCCEEECC YYGYFESYIPIPGMLLKARMVGRVSDLDSEKYQANETATTVCTYYRVEKDDSQHELLREK EEEEECCCCCCCHHHHHHHHHHHHHCCCCCHHCCCCCCEEEEEEEEECCCCCHHHHHHHC PCKYEIVISEDNVGSKIRIEHYNETDMVSAPGYTPVPMVSELHSIETKRIVKLSKDLSVI CCCEEEEEECCCCCCEEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCEEE SADKSLLMPGESAVVKIIVKDINNNPISNLNLQCGHFSTGSWNSRCDIKAGGNPGEYLQT ECCCEEECCCCCCEEEEEEEECCCCCCCCCEEEECCCCCCCCCCEEEEEECCCCCCEEEE VTYNGGSNGELKLTYKYFGELIKDKFTISGTIKK EEECCCCCCEEEEEHHHHHHHHHCCEEEEEEECC >Mature Secondary Structure SKHNLIIYSLLLAAAPISVLADTSTTSAATVGMFSPPTAPSVGHRPSSPLSDYGLELNG CCCCCHHHHHHHHHCCCEEEECCCCCCEEEEECCCCCCCCCCCCCCCCCHHHCCEEECC YYGYFESYIPIPGMLLKARMVGRVSDLDSEKYQANETATTVCTYYRVEKDDSQHELLREK EEEEECCCCCCCHHHHHHHHHHHHHCCCCCHHCCCCCCEEEEEEEEECCCCCHHHHHHHC PCKYEIVISEDNVGSKIRIEHYNETDMVSAPGYTPVPMVSELHSIETKRIVKLSKDLSVI CCCEEEEEECCCCCCEEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCEEE SADKSLLMPGESAVVKIIVKDINNNPISNLNLQCGHFSTGSWNSRCDIKAGGNPGEYLQT ECCCEEECCCCCCEEEEEEEECCCCCCCCCEEEECCCCCCCCCCEEEEEECCCCCCEEEE VTYNGGSNGELKLTYKYFGELIKDKFTISGTIKK EEECCCCCCEEEEEHHHHHHHHHCCEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA