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The map label for this gene is yhaO [H]

Identifier: 194736541

GI number: 194736541

Start: 3310885

End: 3312324

Strand: Reverse

Name: yhaO [H]

Synonym: SeSA_A3430

Alternate gene names: 194736541

Gene position: 3312324-3310885 (Counterclockwise)

Preceding gene: 194737040

Following gene: 194737341

Centisome position: 70.34

GC content: 49.51

Gene sequence:

>1440_bases
ATGATTTTCTTATTACAAGAAAGCACCTGCACCTCACGTTCTGCATATCGCCTTGCTGCGGCACGAAAAATAAAAAAAAC
CTCTACCTACACATTGAGCGAGAATTTTATGGAATCGGCTAGTAATACCAGCGTAATCCTCGACGCATCAGCCCCGGCGC
GTCGGGCAGGGATGACAGAAAGCGAATGGCGTGAAGCTATCAAATTTGATAGTACCGACACCGGTTGGGTCATTATGAGT
ATCGGGATGGCGATCGGCGCAGGAATCGTTTTTCTTCCTGTCCAGGTTGGCCTGATGGGACTTTGGGTCTTTTTACTCTC
TTCTATTATTGGCTATCCGGCCATGTACCTGTTCCAGCGGCTGTTTATTAATACGCTGGCGGAATCCCCGGAATGTAAAG
ACTACCCCAGCGTGATCAGCGGCTATCTGGGCAAAAACTGGGGTATTTTATTAGGTGCGCTGTACTTTGTAATGCTCGTC
ATCTGGATGTTCGTCTATTCTACGGCGATTACTAACGACAGCGCCTCTTATCTGCATACTTTCGGCGTAACGGAAGGATT
ACTTTCCGATAGTCCGTTTTATGGTCTGGTGCTGATCTGCATCCTGGTGGCGATTTCCTCACGCGGTGAAAAATTACTGT
TCAAAATTTCCACCGGCATGGTGCTGACCAAGCTACTGGTAGTAGCGGCGCTGGGCGTCTCCATGGTGGGTATGTGGCAT
CTGTATAACATTGGCGCGCTGCCGCCGATGGCCCTGCTGATTAAAAACGCCATTATTACCCTGCCATTTACGCTGACCTC
GATTTTATTTATCCAGACGTTAAGCCCAATGGTGATCTCTTACCGTTCACGCGAAAAATCTATTGAGGTCGCACGTCATA
AAGCGTTGCGCGCCATGAATATCGCGTTTGGCGTCCTGTTCGTTACCGTCTTTTTCTATGCGGTTTCCTTCACCCTGGCG
ATGGGGCATGACGAAGCGGTGAAAGCCTACGAGCAGAATATTTCCGCCCTGGCGATCGCCGCGCAGTTTATTAGCGGCGA
TGGCGCTGGCTGGGTCAAAGTGGTTAGCGTAATTCTGAACATCTTTGCCGTCATGACCGCCTTCTTTGGCGTTTACTTAG
GATTCCGCGAAGCGACGCAAGGCATTGTGATGAATATCCTGCGCCGCAAAATGCCCGCCGAGAAGATTAAGGAAAATCTG
GTACAGCGCGGCATTATGATTTTCGCTATTTTGCTGGCCTGGAGCGCCATTGTGCTCAACGCGCCGGTACTGAGTTTCAC
CTCTATTTGTAGCCCTATCTTCGGTATGGTGGGCTGTTTAATTCCGGCATGGTTGGTCTACAAGGTTCCCGCATTGCACA
AATATAAAGGCGCTTCGTTGTACCTGATTATTATTACCGGTCTGCTGCTATGCGTTTCTCCGTTCCTGGCATTCTCTTGA

Upstream 100 bases:

>100_bases
AGAAAATAACAACATTAAACCAATAGTAAATAGAAAAGAATTCTTAACCCACAAGAAATGCAGGTGTTTTATTGGTAAGT
TTTTCTCTTATCGTGCGCGT

Downstream 100 bases:

>100_bases
TATACCTGAGATTAAGGTTGTTGTTATGTTTGAATCTAAAATAAATCCATTGTGGCAAAGTTTTATCCTGGCCGTACAGG
AAGAAGTAAAACCGGCGCTG

Product: inner membrane transport protein YhaO

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 479; Mature: 479

Protein sequence:

>479_residues
MIFLLQESTCTSRSAYRLAAARKIKKTSTYTLSENFMESASNTSVILDASAPARRAGMTESEWREAIKFDSTDTGWVIMS
IGMAIGAGIVFLPVQVGLMGLWVFLLSSIIGYPAMYLFQRLFINTLAESPECKDYPSVISGYLGKNWGILLGALYFVMLV
IWMFVYSTAITNDSASYLHTFGVTEGLLSDSPFYGLVLICILVAISSRGEKLLFKISTGMVLTKLLVVAALGVSMVGMWH
LYNIGALPPMALLIKNAIITLPFTLTSILFIQTLSPMVISYRSREKSIEVARHKALRAMNIAFGVLFVTVFFYAVSFTLA
MGHDEAVKAYEQNISALAIAAQFISGDGAGWVKVVSVILNIFAVMTAFFGVYLGFREATQGIVMNILRRKMPAEKIKENL
VQRGIMIFAILLAWSAIVLNAPVLSFTSICSPIFGMVGCLIPAWLVYKVPALHKYKGASLYLIIITGLLLCVSPFLAFS

Sequences:

>Translated_479_residues
MIFLLQESTCTSRSAYRLAAARKIKKTSTYTLSENFMESASNTSVILDASAPARRAGMTESEWREAIKFDSTDTGWVIMS
IGMAIGAGIVFLPVQVGLMGLWVFLLSSIIGYPAMYLFQRLFINTLAESPECKDYPSVISGYLGKNWGILLGALYFVMLV
IWMFVYSTAITNDSASYLHTFGVTEGLLSDSPFYGLVLICILVAISSRGEKLLFKISTGMVLTKLLVVAALGVSMVGMWH
LYNIGALPPMALLIKNAIITLPFTLTSILFIQTLSPMVISYRSREKSIEVARHKALRAMNIAFGVLFVTVFFYAVSFTLA
MGHDEAVKAYEQNISALAIAAQFISGDGAGWVKVVSVILNIFAVMTAFFGVYLGFREATQGIVMNILRRKMPAEKIKENL
VQRGIMIFAILLAWSAIVLNAPVLSFTSICSPIFGMVGCLIPAWLVYKVPALHKYKGASLYLIIITGLLLCVSPFLAFS
>Mature_479_residues
MIFLLQESTCTSRSAYRLAAARKIKKTSTYTLSENFMESASNTSVILDASAPARRAGMTESEWREAIKFDSTDTGWVIMS
IGMAIGAGIVFLPVQVGLMGLWVFLLSSIIGYPAMYLFQRLFINTLAESPECKDYPSVISGYLGKNWGILLGALYFVMLV
IWMFVYSTAITNDSASYLHTFGVTEGLLSDSPFYGLVLICILVAISSRGEKLLFKISTGMVLTKLLVVAALGVSMVGMWH
LYNIGALPPMALLIKNAIITLPFTLTSILFIQTLSPMVISYRSREKSIEVARHKALRAMNIAFGVLFVTVFFYAVSFTLA
MGHDEAVKAYEQNISALAIAAQFISGDGAGWVKVVSVILNIFAVMTAFFGVYLGFREATQGIVMNILRRKMPAEKIKENL
VQRGIMIFAILLAWSAIVLNAPVLSFTSICSPIFGMVGCLIPAWLVYKVPALHKYKGASLYLIIITGLLLCVSPFLAFS

Specific function: Unknown

COG id: COG0814

COG function: function code E; Amino acid permeases

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the amino acid/polyamine transporter 2 family. SdaC/TdcC subfamily [H]

Homologues:

Organism=Escherichia coli, GI145693183, Length=443, Percent_Identity=95.9367945823928, Blast_Score=863, Evalue=0.0,
Organism=Escherichia coli, GI1789961, Length=410, Percent_Identity=45.1219512195122, Blast_Score=367, Evalue=1e-102,
Organism=Escherichia coli, GI1789160, Length=422, Percent_Identity=28.436018957346, Blast_Score=132, Evalue=5e-32,
Organism=Escherichia coli, GI1789504, Length=422, Percent_Identity=25.5924170616114, Blast_Score=97, Evalue=2e-21,
Organism=Escherichia coli, GI1789211, Length=411, Percent_Identity=22.3844282238443, Blast_Score=94, Evalue=2e-20,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004694 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 52528; Mature: 52528

Theoretical pI: Translated: 9.51; Mature: 9.51

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
4.4 %Met     (Translated Protein)
5.6 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
4.4 %Met     (Mature Protein)
5.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIFLLQESTCTSRSAYRLAAARKIKKTSTYTLSENFMESASNTSVILDASAPARRAGMTE
CEEEEECCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCEEEEECCCCHHHCCCCH
SEWREAIKFDSTDTGWVIMSIGMAIGAGIVFLPVQVGLMGLWVFLLSSIIGYPAMYLFQR
HHHHHHHCCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHH
LFINTLAESPECKDYPSVISGYLGKNWGILLGALYFVMLVIWMFVYSTAITNDSASYLHT
HHHHHHHCCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHH
FGVTEGLLSDSPFYGLVLICILVAISSRGEKLLFKISTGMVLTKLLVVAALGVSMVGMWH
HCCHHHHCCCCCHHHHHHHHHHHHHCCCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHH
LYNIGALPPMALLIKNAIITLPFTLTSILFIQTLSPMVISYRSREKSIEVARHKALRAMN
HHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IAFGVLFVTVFFYAVSFTLAMGHDEAVKAYEQNISALAIAAQFISGDGAGWVKVVSVILN
HHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHH
IFAVMTAFFGVYLGFREATQGIVMNILRRKMPAEKIKENLVQRGIMIFAILLAWSAIVLN
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHC
APVLSFTSICSPIFGMVGCLIPAWLVYKVPALHKYKGASLYLIIITGLLLCVSPFLAFS
CCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCCCCCCHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MIFLLQESTCTSRSAYRLAAARKIKKTSTYTLSENFMESASNTSVILDASAPARRAGMTE
CEEEEECCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCEEEEECCCCHHHCCCCH
SEWREAIKFDSTDTGWVIMSIGMAIGAGIVFLPVQVGLMGLWVFLLSSIIGYPAMYLFQR
HHHHHHHCCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHH
LFINTLAESPECKDYPSVISGYLGKNWGILLGALYFVMLVIWMFVYSTAITNDSASYLHT
HHHHHHHCCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHH
FGVTEGLLSDSPFYGLVLICILVAISSRGEKLLFKISTGMVLTKLLVVAALGVSMVGMWH
HCCHHHHCCCCCHHHHHHHHHHHHHCCCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHH
LYNIGALPPMALLIKNAIITLPFTLTSILFIQTLSPMVISYRSREKSIEVARHKALRAMN
HHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IAFGVLFVTVFFYAVSFTLAMGHDEAVKAYEQNISALAIAAQFISGDGAGWVKVVSVILN
HHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHH
IFAVMTAFFGVYLGFREATQGIVMNILRRKMPAEKIKENLVQRGIMIFAILLAWSAIVLN
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHC
APVLSFTSICSPIFGMVGCLIPAWLVYKVPALHKYKGASLYLIIITGLLLCVSPFLAFS
CCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCCCCCCHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]