Definition | Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633 chromosome, complete genome. |
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Accession | NC_011094 |
Length | 4,709,075 |
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The map label for this gene is steC [H]
Identifier: 194736387
GI number: 194736387
Start: 1767542
End: 1768519
Strand: Reverse
Name: steC [H]
Synonym: SeSA_A1827
Alternate gene names: 194736387
Gene position: 1768519-1767542 (Counterclockwise)
Preceding gene: 194736552
Following gene: 194736942
Centisome position: 37.56
GC content: 41.41
Gene sequence:
>978_bases GTGACCGAGACGGAGTGTTCTGAACATTGCGTCGATTTTTTAAAAGAAACGATGTTTAATTATAATAATGGGGAAATTAC GCTTGCCGCTTTAGATAATGATAACCAGCCGCCGAGCGAAGCAGGTAGTAATGGAATCTATGAGGCTTTTGAGCAACGTT TGATAGACTTCCTGACCACGCCCGCCATGGCGTCTGGTGATGAGAGCGGCGATACTGATCAGACGGATGCATCACAACCA GCGGCAATAGAGGCGTTTATTAACTCGTCGGAGTTTAAAAAAAATATCCGCATGCATGATATTGAAAAAAATAAAATAGG TAGCGGAAGTTATGGGACAGTCTATCTGTTAAATGATGAGTTTGTTGTTAAGATTCCAATTAATGAGCGGGGAATAAAAG TGGATGTTAACTCTCCGGAACATCGTAATTGTCATCCTGATCGTGTCAGTAAGTATTTGAACATGGCCAATGGCGACAAG GATTTTTCTCGTTCGGCCATCATGAATATTAATGGTAAAGACGTTACGGTTTTAGTTTCAAAATATATTCAAGGTCAGGA GTTCGATATTGAAGATGAAGATAACTATCGAATGGCGGAGGCGCTTCTTGAATCCCGGGGGGTTTATATGCATGATATAG ATAACTTAGGTAATATTCTGGTTAAAGAGGGGGTACTTTTCTTTGTGGATGGCGATCAAATCGTGCTGTCACAAGAATCC CGGCAACAGCGAAGCGTTTCTCTTGCAACAAGGCAACTGGAAGAGCAAATTAAGGCCCGTTACCTGATAAAATTAAAGCA GGCCGAGACCGAAGGAAATACTGAAGATATTGAATATTATAAGTCACTTATTACAGAGCTTGATGAGTTAATCGGAGAGG AAGAACAGACACCTGCGTCAGGAAGACGTTTTAAACTAGCCGCGCCGGAGGAAGGGACTCTTGTGGCTAAAGTATTAAAG GATGAATTAAAAAAATAG
Upstream 100 bases:
>100_bases TGATGCCTCCAGACCTGAAACAATGGATAAATACACTGTAGAGGTATTAGCACATCAAGAAAATATGTTACTACTACAGA TGTTTTACGATGGAGTATTA
Downstream 100 bases:
>100_bases CATTTAGTTCCGTTCTTTTCTGCCAATCGCCGGGGCTCATTCGCTACAGATTTGCCGATCAATTATTGAGAGTTGCTATT CGTTTAAAGGTCGTTCAGGG
Product: hypothetical protein
Products: NA
Alternate protein names: Salmonella translocated effector C [H]
Number of amino acids: Translated: 325; Mature: 324
Protein sequence:
>325_residues MTETECSEHCVDFLKETMFNYNNGEITLAALDNDNQPPSEAGSNGIYEAFEQRLIDFLTTPAMASGDESGDTDQTDASQP AAIEAFINSSEFKKNIRMHDIEKNKIGSGSYGTVYLLNDEFVVKIPINERGIKVDVNSPEHRNCHPDRVSKYLNMANGDK DFSRSAIMNINGKDVTVLVSKYIQGQEFDIEDEDNYRMAEALLESRGVYMHDIDNLGNILVKEGVLFFVDGDQIVLSQES RQQRSVSLATRQLEEQIKARYLIKLKQAETEGNTEDIEYYKSLITELDELIGEEEQTPASGRRFKLAAPEEGTLVAKVLK DELKK
Sequences:
>Translated_325_residues MTETECSEHCVDFLKETMFNYNNGEITLAALDNDNQPPSEAGSNGIYEAFEQRLIDFLTTPAMASGDESGDTDQTDASQP AAIEAFINSSEFKKNIRMHDIEKNKIGSGSYGTVYLLNDEFVVKIPINERGIKVDVNSPEHRNCHPDRVSKYLNMANGDK DFSRSAIMNINGKDVTVLVSKYIQGQEFDIEDEDNYRMAEALLESRGVYMHDIDNLGNILVKEGVLFFVDGDQIVLSQES RQQRSVSLATRQLEEQIKARYLIKLKQAETEGNTEDIEYYKSLITELDELIGEEEQTPASGRRFKLAAPEEGTLVAKVLK DELKK >Mature_324_residues TETECSEHCVDFLKETMFNYNNGEITLAALDNDNQPPSEAGSNGIYEAFEQRLIDFLTTPAMASGDESGDTDQTDASQPA AIEAFINSSEFKKNIRMHDIEKNKIGSGSYGTVYLLNDEFVVKIPINERGIKVDVNSPEHRNCHPDRVSKYLNMANGDKD FSRSAIMNINGKDVTVLVSKYIQGQEFDIEDEDNYRMAEALLESRGVYMHDIDNLGNILVKEGVLFFVDGDQIVLSQESR QQRSVSLATRQLEEQIKARYLIKLKQAETEGNTEDIEYYKSLITELDELIGEEEQTPASGRRFKLAAPEEGTLVAKVLKD ELKK
Specific function: Effector proteins function to alter host cell physiology and promote bacterial survival in host tissues. This protein is a kinase, which is required for SPI-2 TTSS-dependent F-actin meshwork formation in infected host cells [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Secreted. Host cytoplasm. Note=Secreted via type III secretion system 2 (SPI-2 TTSS), and delivered into the host cytoplasm [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the protein kinase superfamily [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 36588; Mature: 36457
Theoretical pI: Translated: 4.31; Mature: 4.31
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTETECSEHCVDFLKETMFNYNNGEITLAALDNDNQPPSEAGSNGIYEAFEQRLIDFLTT CCCCCHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCCCHHCCCCHHHHHHHHHHHHHHCC PAMASGDESGDTDQTDASQPAAIEAFINSSEFKKNIRMHDIEKNKIGSGSYGTVYLLNDE CCCCCCCCCCCCCCCCCCCCHHHHHHHCHHHHHHCCCCEECCCCCCCCCCCCEEEEECCC FVVKIPINERGIKVDVNSPEHRNCHPDRVSKYLNMANGDKDFSRSAIMNINGKDVTVLVS EEEEEECCCCCEEEECCCCCCCCCCHHHHHHHHHHCCCCCCCCCCEEEECCCCCHHHEEH KYIQGQEFDIEDEDNYRMAEALLESRGVYMHDIDNLGNILVKEGVLFFVDGDQIVLSQES HHHCCCCCCCCCCCCHHHHHHHHHHCCCEEECHHHHHHHEECCCEEEEECCCEEEECCHH RQQRSVSLATRQLEEQIKARYLIKLKQAETEGNTEDIEYYKSLITELDELIGEEEQTPAS HHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCC GRRFKLAAPEEGTLVAKVLKDELKK CCEEEEECCCCCHHHHHHHHHHHCC >Mature Secondary Structure TETECSEHCVDFLKETMFNYNNGEITLAALDNDNQPPSEAGSNGIYEAFEQRLIDFLTT CCCCHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCCCHHCCCCHHHHHHHHHHHHHHCC PAMASGDESGDTDQTDASQPAAIEAFINSSEFKKNIRMHDIEKNKIGSGSYGTVYLLNDE CCCCCCCCCCCCCCCCCCCCHHHHHHHCHHHHHHCCCCEECCCCCCCCCCCCEEEEECCC FVVKIPINERGIKVDVNSPEHRNCHPDRVSKYLNMANGDKDFSRSAIMNINGKDVTVLVS EEEEEECCCCCEEEECCCCCCCCCCHHHHHHHHHHCCCCCCCCCCEEEECCCCCHHHEEH KYIQGQEFDIEDEDNYRMAEALLESRGVYMHDIDNLGNILVKEGVLFFVDGDQIVLSQES HHHCCCCCCCCCCCCHHHHHHHHHHCCCEEECHHHHHHHEECCCEEEEECCCEEEECCHH RQQRSVSLATRQLEEQIKARYLIKLKQAETEGNTEDIEYYKSLITELDELIGEEEQTPAS HHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCC GRRFKLAAPEEGTLVAKVLKDELKK CCEEEEECCCCCHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA